RNA–Protein interactions for RNA: ENST00000315554.12

CDC42-201, Transcript of cell division cycle 42, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene CDC42, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-201ENST00000315554 BCKDHAP12694 445 aa7.34□□□□□ -1.23
CDC42-201ENST00000315554 ALOX15P16050 662 aaPredicted RBP7.34□□□□□ -1.23
CDC42-201ENST00000315554 SDC1P18827 310 aa7.34□□□□□ -1.23
CDC42-201ENST00000315554 PRPH2P23942 346 aa7.34□□□□□ -1.23
CDC42-201ENST00000315554 PIK3R1P27986 724 aa7.34□□□□□ -1.23
CDC42-201ENST00000315554 XKP51811 444 aa7.34□□□□□ -1.23
CDC42-201ENST00000315554 SLC26A5P58743 744 aa7.34□□□□□ -1.23
CDC42-201ENST00000315554 TRA2BP62995 288 aaKnown RBP7.34□□□□□ -1.23
CDC42-201ENST00000315554 IGLV3-21P80748 117 aaPredicted RBP7.34□□□□□ -1.23
CDC42-201ENST00000315554 ZNF763Q0D2J5 394 aa7.34□□□□□ -1.23
CDC42-201ENST00000315554 SF3A3Q12874 501 aaKnown RBP eCLIP7.34□□□□□ -1.23
CDC42-201ENST00000315554 AIMP2Q13155 320 aaKnown RBP7.34□□□□□ -1.23
CDC42-201ENST00000315554 ATP6AP1LQ52LC2 224 aa7.34□□□□□ -1.23
CDC42-201ENST00000315554 C6orf136Q5SQH8 315 aa7.34□□□□□ -1.23
CDC42-201ENST00000315554 SLC48A1Q6P1K1 146 aa7.34□□□□□ -1.23
CDC42-201ENST00000315554 GALNT18Q6P9A2 607 aa7.34□□□□□ -1.23
CDC42-201ENST00000315554 LINC00696Q6ZRV3 163 aa7.34□□□□□ -1.23
CDC42-201ENST00000315554 MAVSQ7Z434 540 aa7.34□□□□□ -1.23
CDC42-201ENST00000315554 WDR75Q8IWA0 830 aaKnown RBP7.34□□□□□ -1.23
CDC42-201ENST00000315554 KBTBD2Q8IY47 623 aa7.34□□□□□ -1.23
CDC42-201ENST00000315554 TMEM132CQ8N3T6 1108 aa7.34□□□□□ -1.23
CDC42-201ENST00000315554 LIX1Q8N485 282 aa7.34□□□□□ -1.23
CDC42-201ENST00000315554 FNDC5Q8NAU1 212 aa7.34□□□□□ -1.23
CDC42-201ENST00000315554 NFAM1Q8NET5 270 aaPredicted RBP7.34□□□□□ -1.23
CDC42-201ENST00000315554 VPS37AQ8NEZ2 397 aa7.34□□□□□ -1.23
CDC42-201ENST00000315554 OR4K14Q8NGD5 310 aa7.34□□□□□ -1.23
CDC42-201ENST00000315554 RAB3IL1Q8TBN0 382 aa7.34□□□□□ -1.23
CDC42-201ENST00000315554 THAP3Q8WTV1 239 aaPredicted RBP7.34□□□□□ -1.23
CDC42-201ENST00000315554 PTPMT1Q8WUK0 201 aaPredicted RBP7.34□□□□□ -1.23
CDC42-201ENST00000315554 CKAP2Q8WWK9 683 aa7.34□□□□□ -1.23
CDC42-201ENST00000315554 TANKQ92844 425 aa7.34□□□□□ -1.23
CDC42-201ENST00000315554 NCLNQ969V3 563 aa7.34□□□□□ -1.23
CDC42-201ENST00000315554 NACC2Q96BF6 587 aa7.34□□□□□ -1.23
CDC42-201ENST00000315554 VPS50Q96JG6 964 aa7.34□□□□□ -1.23
CDC42-201ENST00000315554 PPP3R2Q96LZ3 170 aa7.34□□□□□ -1.23
CDC42-201ENST00000315554 DGAT2Q96PD7 388 aa7.34□□□□□ -1.23
CDC42-201ENST00000315554 FAIM2Q9BWQ8 316 aa7.34□□□□□ -1.23
CDC42-201ENST00000315554 OR8D2Q9GZM6 311 aa7.34□□□□□ -1.23
CDC42-201ENST00000315554 WDR55Q9H6Y2 383 aaPredicted RBP7.34□□□□□ -1.23
CDC42-201ENST00000315554 AKTIPQ9H8T0 292 aa7.34□□□□□ -1.23
CDC42-201ENST00000315554 LIN28AQ9H9Z2 209 aaKnown RBP7.34□□□□□ -1.23
CDC42-201ENST00000315554 KCNK13Q9HB14 408 aa7.34□□□□□ -1.23
CDC42-201ENST00000315554 ZBTB20Q9HC78 741 aaPredicted RBP7.34□□□□□ -1.23
CDC42-201ENST00000315554 HAO1Q9UJM8 370 aa7.34□□□□□ -1.23
CDC42-201ENST00000315554 CES1P1Q9UKY3 287 aa7.34□□□□□ -1.23
CDC42-201ENST00000315554 EXO1Q9UQ84 846 aaKnown RBP7.34□□□□□ -1.23
CDC42-201ENST00000315554 MED13Q9UHV7 2174 aa7.34□□□□□ -1.23
CDC42-201ENST00000315554 ATRXP46100 2492 aa7.33□□□□□ -1.24
CDC42-201ENST00000315554 NBEAQ8NFP9 2946 aa7.33□□□□□ -1.24
CDC42-201ENST00000315554 PIEZO2Q9H5I5 2752 aa7.33□□□□□ -1.24
CDC42-201ENST00000315554 IGSF10Q6WRI0 2623 aa7.33□□□□□ -1.24
CDC42-201ENST00000315554 TRBV11-1A0A0K0K1C0 115 aa7.33□□□□□ -1.24
CDC42-201ENST00000315554 A0A1W2PQ72 361 aa7.33□□□□□ -1.24
CDC42-201ENST00000315554 C1orf226A1L170 272 aa7.33□□□□□ -1.24
CDC42-201ENST00000315554 BLACEA4D250 179 aa7.33□□□□□ -1.24
CDC42-201ENST00000315554 MKRN2OSH3BPM6 223 aa7.33□□□□□ -1.24
CDC42-201ENST00000315554 DYNC1I1O14576 645 aa7.33□□□□□ -1.24
CDC42-201ENST00000315554 KLF11O14901 512 aa7.33□□□□□ -1.24
CDC42-201ENST00000315554 ATP8B1O43520 1251 aa7.33□□□□□ -1.24
CDC42-201ENST00000315554 PRKNO60260 465 aaPredicted RBP7.33□□□□□ -1.24
CDC42-201ENST00000315554 SERPINA7P05543 415 aa7.33□□□□□ -1.24
CDC42-201ENST00000315554 CYC1P08574 325 aa7.33□□□□□ -1.24
CDC42-201ENST00000315554 CT62P0C5K7 136 aa7.33□□□□□ -1.24
CDC42-201ENST00000315554 CPMP14384 443 aa7.33□□□□□ -1.24
CDC42-201ENST00000315554 EFNA1P20827 205 aaPredicted RBP7.33□□□□□ -1.24
CDC42-201ENST00000315554 NT5EP21589 574 aa7.33□□□□□ -1.24
CDC42-201ENST00000315554 EPHA3P29320 983 aa7.33□□□□□ -1.24
CDC42-201ENST00000315554 STT3AP46977 705 aa7.33□□□□□ -1.24
CDC42-201ENST00000315554 CLK1P49759 484 aaKnown RBP7.33□□□□□ -1.24
CDC42-201ENST00000315554 NME5P56597 212 aa7.33□□□□□ -1.24
CDC42-201ENST00000315554 PLIN5Q00G26 463 aa7.33□□□□□ -1.24
CDC42-201ENST00000315554 GUCY1A3Q02108 690 aa7.33□□□□□ -1.24
CDC42-201ENST00000315554 SERTAD2Q14140 314 aa7.33□□□□□ -1.24
CDC42-201ENST00000315554 ZNF267Q14586 743 aaPredicted RBP7.33□□□□□ -1.24
CDC42-201ENST00000315554 MYBPC3Q14896 1274 aa7.33□□□□□ -1.24
CDC42-201ENST00000315554 PTGR1Q14914 329 aa7.33□□□□□ -1.24
CDC42-201ENST00000315554 ELAVL1Q15717 326 aaKnown RBP7.33□□□□□ -1.24
CDC42-201ENST00000315554 LTB4RQ15722 352 aa7.33□□□□□ -1.24
CDC42-201ENST00000315554 SLC9B1Q4ZJI4 515 aa7.33□□□□□ -1.24
CDC42-201ENST00000315554 IRAK1BP1Q5VVH5 260 aa7.33□□□□□ -1.24
CDC42-201ENST00000315554 IL23RQ5VWK5 629 aa7.33□□□□□ -1.24
CDC42-201ENST00000315554 PLAG1Q6DJT9 500 aa7.33□□□□□ -1.24
CDC42-201ENST00000315554 NXNQ6DKJ4 435 aa7.33□□□□□ -1.24
CDC42-201ENST00000315554 FAM71E1Q6IPT2 247 aa7.33□□□□□ -1.24
CDC42-201ENST00000315554 C16orf47Q6ZP98 133 aaPredicted RBP7.33□□□□□ -1.24
CDC42-201ENST00000315554 RNF165Q6ZSG1 346 aa7.33□□□□□ -1.24
CDC42-201ENST00000315554 PTRH1Q86Y79 214 aaKnown RBP7.33□□□□□ -1.24
CDC42-201ENST00000315554 TICAM1Q8IUC6 712 aa7.33□□□□□ -1.24
CDC42-201ENST00000315554 CRLF3Q8IUI8 442 aa7.33□□□□□ -1.24
CDC42-201ENST00000315554 ADCY4Q8NFM4 1077 aa7.33□□□□□ -1.24
CDC42-201ENST00000315554 C9orf43Q8TAL5 461 aaPredicted RBP7.33□□□□□ -1.24
CDC42-201ENST00000315554 PSMF1Q92530 271 aa7.33□□□□□ -1.24
CDC42-201ENST00000315554 CNRIP1Q96F85 164 aaPredicted RBP7.33□□□□□ -1.24
CDC42-201ENST00000315554 MARK4Q96L34 752 aa7.33□□□□□ -1.24
CDC42-201ENST00000315554 FCRL1Q96LA6 429 aa7.33□□□□□ -1.24
CDC42-201ENST00000315554 UBL7Q96S82 380 aaPredicted RBP7.33□□□□□ -1.24
CDC42-201ENST00000315554 CNPPD1Q9BV87 410 aa7.33□□□□□ -1.24
CDC42-201ENST00000315554 LHPPQ9H008 270 aa7.33□□□□□ -1.24
CDC42-201ENST00000315554 ZNF552Q9H707 407 aaPredicted RBP7.33□□□□□ -1.24
CDC42-201ENST00000315554 ANKRA2Q9H9E1 313 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms