RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 CRIP3Q6Q6R5 217 aa7.38□□□□□ -1.23
CNOT4-201ENST00000315544 ADAMTSL4Q6UY14 1074 aa7.38□□□□□ -1.23
CNOT4-201ENST00000315544 PARS2Q7L3T8 475 aaKnown RBP7.38□□□□□ -1.23
CNOT4-201ENST00000315544 ANKRD46Q86W74 232 aa7.38□□□□□ -1.23
CNOT4-201ENST00000315544 OR52I1Q8NGK6 324 aa7.38□□□□□ -1.23
CNOT4-201ENST00000315544 OR2L2Q8NH16 312 aa7.38□□□□□ -1.23
CNOT4-201ENST00000315544 BAHD1Q8TBE0 780 aaPredicted RBP7.38□□□□□ -1.23
CNOT4-201ENST00000315544 ZNF675Q8TD23 568 aa7.38□□□□□ -1.23
CNOT4-201ENST00000315544 S100ZQ8WXG8 99 aa7.38□□□□□ -1.23
CNOT4-201ENST00000315544 FGF14Q92915 247 aa7.38□□□□□ -1.23
CNOT4-201ENST00000315544 SDCCAG3Q96C92 435 aa7.38□□□□□ -1.23
CNOT4-201ENST00000315544 EFHD1Q9BUP0 239 aa7.38□□□□□ -1.23
CNOT4-201ENST00000315544 CCDC32Q9BV29 185 aa7.38□□□□□ -1.23
CNOT4-201ENST00000315544 GPR34Q9UPC5 381 aa7.38□□□□□ -1.23
CNOT4-201ENST00000315544 AURKCQ9UQB9 309 aa7.38□□□□□ -1.23
CNOT4-201ENST00000315544 ENPP4Q9Y6X5 453 aa7.38□□□□□ -1.23
CNOT4-201ENST00000315544 EML6Q6ZMW3 1958 aa7.38□□□□□ -1.23
CNOT4-201ENST00000315544 MYO10Q9HD67 2058 aa7.38□□□□□ -1.23
CNOT4-201ENST00000315544 KMT2BQ9UMN6 2715 aaPredicted RBP7.38□□□□□ -1.23
CNOT4-201ENST00000315544 RPS10-NUDT3A0A1W2PQS6 291 aa7.37□□□□□ -1.23
CNOT4-201ENST00000315544 PRRT4C9JH25 899 aa7.37□□□□□ -1.23
CNOT4-201ENST00000315544 TM4SF5O14894 197 aa7.37□□□□□ -1.23
CNOT4-201ENST00000315544 TNFSF14O43557 240 aa7.37□□□□□ -1.23
CNOT4-201ENST00000315544 NARSO43776 548 aaKnown RBP7.37□□□□□ -1.23
CNOT4-201ENST00000315544 RHOCP08134 193 aa7.37□□□□□ -1.23
CNOT4-201ENST00000315544 DLX5P56178 289 aa7.37□□□□□ -1.23
CNOT4-201ENST00000315544 FBXO43Q4G163 708 aa7.37□□□□□ -1.23
CNOT4-201ENST00000315544 SPIN4Q56A73 249 aa7.37□□□□□ -1.23
CNOT4-201ENST00000315544 DESI1Q6ICB0 168 aa7.37□□□□□ -1.23
CNOT4-201ENST00000315544 P2RY8Q86VZ1 359 aa7.37□□□□□ -1.23
CNOT4-201ENST00000315544 SUMF1Q8NBK3 374 aa7.37□□□□□ -1.23
CNOT4-201ENST00000315544 ZNF740Q8NDX6 193 aa7.37□□□□□ -1.23
CNOT4-201ENST00000315544 PIP5K1AQ99755 562 aa7.37□□□□□ -1.23
CNOT4-201ENST00000315544 YIPF2Q9BWQ6 316 aa7.37□□□□□ -1.23
CNOT4-201ENST00000315544 IL20Q9NYY1 176 aa7.37□□□□□ -1.23
CNOT4-201ENST00000315544 PCDHGB6Q9Y5F9 930 aa7.37□□□□□ -1.23
CNOT4-201ENST00000315544 DCHS1Q96JQ0 3298 aa7.37□□□□□ -1.23
CNOT4-201ENST00000315544 CENPVL1A0A0U1RR11 272 aa7.37□□□□□ -1.23
CNOT4-201ENST00000315544 UBA6A0AVT1 1052 aaPredicted RBP7.37□□□□□ -1.23
CNOT4-201ENST00000315544 PIPSLA2A3N6 862 aa7.37□□□□□ -1.23
CNOT4-201ENST00000315544 NT5C1B-RDH14C9J2C7 533 aa7.37□□□□□ -1.23
CNOT4-201ENST00000315544 SGK494L7N484 410 aa7.37□□□□□ -1.23
CNOT4-201ENST00000315544 VIPR1P32241 457 aa7.37□□□□□ -1.23
CNOT4-201ENST00000315544 OR1D2P34982 312 aa7.37□□□□□ -1.23
CNOT4-201ENST00000315544 KIR2DL1P43626 348 aaPredicted RBP7.37□□□□□ -1.23
CNOT4-201ENST00000315544 MAPK8P45983 427 aa7.37□□□□□ -1.23
CNOT4-201ENST00000315544 SHC2P98077 582 aa7.37□□□□□ -1.23
CNOT4-201ENST00000315544 METRNLQ641Q3 311 aa7.37□□□□□ -1.23
CNOT4-201ENST00000315544 UNQ9370/PRO34162Q6UXP9 181 aa7.37□□□□□ -1.23
CNOT4-201ENST00000315544 USP43Q70EL4 1123 aa7.37□□□□□ -1.23
CNOT4-201ENST00000315544 FAM109AQ8N4B1 249 aa7.37□□□□□ -1.23
CNOT4-201ENST00000315544 OR4Q3Q8NH05 313 aa7.37□□□□□ -1.23
CNOT4-201ENST00000315544 FBXO30Q8TB52 745 aa7.37□□□□□ -1.23
CNOT4-201ENST00000315544 DNAJA4Q8WW22 397 aaPredicted RBP7.37□□□□□ -1.23
CNOT4-201ENST00000315544 ARRDC3Q96B67 414 aa7.37□□□□□ -1.23
CNOT4-201ENST00000315544 SH3KBP1Q96B97 665 aa7.37□□□□□ -1.23
CNOT4-201ENST00000315544 OTUB2Q96DC9 234 aa7.37□□□□□ -1.23
CNOT4-201ENST00000315544 TCEAL4Q96EI5 215 aa7.37□□□□□ -1.23
CNOT4-201ENST00000315544 PITHD1Q9GZP4 211 aaPredicted RBP7.37□□□□□ -1.23
CNOT4-201ENST00000315544 ENKD1Q9H0I2 346 aa7.37□□□□□ -1.23
CNOT4-201ENST00000315544 REEP4Q9H6H4 257 aa7.37□□□□□ -1.23
CNOT4-201ENST00000315544 SPASTQ9UBP0 616 aa7.37□□□□□ -1.23
CNOT4-201ENST00000315544 FZD4Q9ULV1 537 aa7.37□□□□□ -1.23
CNOT4-201ENST00000315544 GINS2Q9Y248 185 aa7.37□□□□□ -1.23
CNOT4-201ENST00000315544 C7orf66A4D0T2 115 aa7.37□□□□□ -1.23
CNOT4-201ENST00000315544 TRIM77I1YAP6 450 aa7.37□□□□□ -1.23
CNOT4-201ENST00000315544 LCMT2O60294 686 aaKnown RBP7.37□□□□□ -1.23
CNOT4-201ENST00000315544 OXSR1O95747 527 aaPredicted RBP7.37□□□□□ -1.23
CNOT4-201ENST00000315544 URODP06132 367 aa7.37□□□□□ -1.23
CNOT4-201ENST00000315544 HOXB3P14651 431 aaPredicted RBP7.37□□□□□ -1.23
CNOT4-201ENST00000315544 RHCEP18577 417 aa7.37□□□□□ -1.23
CNOT4-201ENST00000315544 PTBP1P26599 531 aaKnown RBP eCLIP7.37□□□□□ -1.238e-7■■■■□ 22.3
CNOT4-201ENST00000315544 RRM2P31350 389 aa7.37□□□□□ -1.23
CNOT4-201ENST00000315544 RANBP1P43487 201 aa7.37□□□□□ -1.23
CNOT4-201ENST00000315544 KIR2DL3P43628 341 aa7.37□□□□□ -1.23
CNOT4-201ENST00000315544 GSTM5P46439 218 aa7.37□□□□□ -1.23
CNOT4-201ENST00000315544 TUFMP49411 452 aaKnown RBP7.37□□□□□ -1.23
CNOT4-201ENST00000315544 TWF1Q12792 350 aa7.37□□□□□ -1.23
CNOT4-201ENST00000315544 GGTLC2Q14390 218 aa7.37□□□□□ -1.23
CNOT4-201ENST00000315544 ACSM5Q6NUN0 579 aa7.37□□□□□ -1.23
CNOT4-201ENST00000315544 GDPGP1Q6ZNW5 385 aa7.37□□□□□ -1.23
CNOT4-201ENST00000315544 GPR137Q96N19 417 aa7.37□□□□□ -1.23
CNOT4-201ENST00000315544 SNX18Q96RF0 628 aa7.37□□□□□ -1.23
CNOT4-201ENST00000315544 KATNB1Q9BVA0 655 aa7.37□□□□□ -1.23
CNOT4-201ENST00000315544 NMNAT1Q9HAN9 279 aaPredicted RBP7.37□□□□□ -1.23
CNOT4-201ENST00000315544 PFDN4Q9NQP4 134 aa7.37□□□□□ -1.23
CNOT4-201ENST00000315544 BAG5Q9UL15 447 aa7.37□□□□□ -1.23
CNOT4-201ENST00000315544 TMEM98Q9Y2Y6 226 aa7.37□□□□□ -1.23
CNOT4-201ENST00000315544 KCNE3Q9Y6H6 103 aa7.37□□□□□ -1.23
CNOT4-201ENST00000315544 DGKBQ9Y6T7 804 aa7.37□□□□□ -1.23
CNOT4-201ENST00000315544 PRR32B1ATL7 298 aa7.36□□□□□ -1.23
CNOT4-201ENST00000315544 FAM47E-STBD1D6RA91 191 aa7.36□□□□□ -1.23
CNOT4-201ENST00000315544 K7EQS6 105 aa7.36□□□□□ -1.23
CNOT4-201ENST00000315544 M0R296 226 aa7.36□□□□□ -1.23
CNOT4-201ENST00000315544 CTDSP2O14595 271 aa7.36□□□□□ -1.23
CNOT4-201ENST00000315544 RHOP08100 348 aa7.36□□□□□ -1.23
CNOT4-201ENST00000315544 EPB42P16452 691 aa7.36□□□□□ -1.23
CNOT4-201ENST00000315544 ZNF24P17028 368 aa7.36□□□□□ -1.23
CNOT4-201ENST00000315544 ZNF7P17097 686 aaPredicted RBP7.36□□□□□ -1.23
CNOT4-201ENST00000315544 DDCP20711 480 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms