RNA–Protein interactions for RNA: ENST00000314191.6

PRKDC-201, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKDC, Length 13,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-201ENST00000314191 TMEFF1Q8IYR6 380 aa5.88□□□□□ -1.47
PRKDC-201ENST00000314191 IQCF1Q8N6M8 205 aa5.88□□□□□ -1.47
PRKDC-201ENST00000314191 DNAJA3Q96EY1 480 aa5.88□□□□□ -1.47
PRKDC-201ENST00000314191 TIMM29Q9BSF4 260 aa5.88□□□□□ -1.47
PRKDC-201ENST00000314191 MYNNQ9NPC7 610 aa5.88□□□□□ -1.47
PRKDC-201ENST00000314191 IRGMA1A4Y4 181 aa5.88□□□□□ -1.47
PRKDC-201ENST00000314191 HAT1O14929 419 aa5.88□□□□□ -1.47
PRKDC-201ENST00000314191 HOXC11O43248 304 aaPredicted RBP5.88□□□□□ -1.47
PRKDC-201ENST00000314191 DCDC1P59894 354 aa5.88□□□□□ -1.47
PRKDC-201ENST00000314191 NFATC3Q12968 1075 aa5.88□□□□□ -1.47
PRKDC-201ENST00000314191 ANKRD34AQ69YU3 496 aa5.88□□□□□ -1.47
PRKDC-201ENST00000314191 PLPP6Q8IY26 295 aa5.88□□□□□ -1.47
PRKDC-201ENST00000314191 HCAR2Q8TDS4 363 aa5.88□□□□□ -1.47
PRKDC-201ENST00000314191 DEPDC7Q96QD5 511 aa5.88□□□□□ -1.47
PRKDC-201ENST00000314191 LMAN1LQ9HAT1 526 aa5.88□□□□□ -1.47
PRKDC-201ENST00000314191 NLGN3Q9NZ94 848 aa5.88□□□□□ -1.47
PRKDC-201ENST00000314191 MED16Q9Y2X0 877 aa5.88□□□□□ -1.47
PRKDC-201ENST00000314191 NPIPA5A0A0B4J1W7 369 aa5.88□□□□□ -1.47
PRKDC-201ENST00000314191 NPIPA7E9PJI5 369 aa5.88□□□□□ -1.47
PRKDC-201ENST00000314191 HCN1O60741 890 aa5.88□□□□□ -1.47
PRKDC-201ENST00000314191 ADAP00813 363 aa5.88□□□□□ -1.47
PRKDC-201ENST00000314191 NPIPA8P0DM63 369 aa5.88□□□□□ -1.47
PRKDC-201ENST00000314191 FAM109BQ6ICB4 259 aaPredicted RBP5.88□□□□□ -1.47
PRKDC-201ENST00000314191 MARCH9Q86YJ5 346 aa5.88□□□□□ -1.47
PRKDC-201ENST00000314191 LRRC25Q8N386 305 aaPredicted RBP5.88□□□□□ -1.47
PRKDC-201ENST00000314191 CHDHQ8NE62 594 aaPredicted RBP5.88□□□□□ -1.47
PRKDC-201ENST00000314191 METTL2AQ96IZ6 378 aaKnown RBP5.88□□□□□ -1.47
PRKDC-201ENST00000314191 CDCA3Q99618 268 aaPredicted RBP5.88□□□□□ -1.47
PRKDC-201ENST00000314191 ABCD2Q9UBJ2 740 aa5.88□□□□□ -1.47
PRKDC-201ENST00000314191 ALPLP05186 524 aa5.88□□□□□ -1.47
PRKDC-201ENST00000314191 MLLT3P42568 568 aaPredicted RBP5.88□□□□□ -1.47
PRKDC-201ENST00000314191 CBLBQ13191 982 aa5.88□□□□□ -1.47
PRKDC-201ENST00000314191 COMMD2Q86X83 199 aa5.88□□□□□ -1.47
PRKDC-201ENST00000314191 OR52E4Q8NGH9 312 aa5.88□□□□□ -1.47
PRKDC-201ENST00000314191 COQ10AQ96MF6 247 aa5.88□□□□□ -1.47
PRKDC-201ENST00000314191 OLAHQ9NV23 265 aa5.88□□□□□ -1.47
PRKDC-201ENST00000314191 SLC25A37Q9NYZ2 338 aa5.88□□□□□ -1.47
PRKDC-201ENST00000314191 ITGB1BP2Q9UKP3 347 aa5.88□□□□□ -1.47
PRKDC-201ENST00000314191 TMEM150CB9EJG8 249 aa5.88□□□□□ -1.47
PRKDC-201ENST00000314191 MC3RP41968 323 aa5.88□□□□□ -1.47
PRKDC-201ENST00000314191 GRK6P43250 576 aa5.88□□□□□ -1.47
PRKDC-201ENST00000314191 HHEXQ03014 270 aa5.88□□□□□ -1.47
PRKDC-201ENST00000314191 GAB1Q13480 694 aa5.88□□□□□ -1.47
PRKDC-201ENST00000314191 ELOCQ15369 112 aa5.88□□□□□ -1.47
PRKDC-201ENST00000314191 TMEM215Q68D42 235 aa5.88□□□□□ -1.47
PRKDC-201ENST00000314191 PTRH1Q86Y79 214 aaKnown RBP5.88□□□□□ -1.47
PRKDC-201ENST00000314191 LTB4R2Q9NPC1 389 aa5.88□□□□□ -1.47
PRKDC-201ENST00000314191 SLC23A2Q9UGH3 650 aa5.88□□□□□ -1.47
PRKDC-201ENST00000314191 PEX16Q9Y5Y5 336 aa5.88□□□□□ -1.47
PRKDC-201ENST00000314191 LINC01565O15544 149 aa5.87□□□□□ -1.47
PRKDC-201ENST00000314191 CDH11P55287 796 aa5.87□□□□□ -1.47
PRKDC-201ENST00000314191 SHC2P98077 582 aa5.87□□□□□ -1.47
PRKDC-201ENST00000314191 DEFB133Q30KQ1 61 aa5.87□□□□□ -1.47
PRKDC-201ENST00000314191 MZT2BQ6NZ67 158 aa5.87□□□□□ -1.47
PRKDC-201ENST00000314191 GKN2Q86XP6 184 aa5.87□□□□□ -1.47
PRKDC-201ENST00000314191 PDXPQ96GD0 296 aa5.87□□□□□ -1.47
PRKDC-201ENST00000314191 PREBQ9HCU5 417 aa5.87□□□□□ -1.47
PRKDC-201ENST00000314191 MRTO4Q9UKD2 239 aaKnown RBP5.87□□□□□ -1.47
PRKDC-201ENST00000314191 MCIDASD6RGH6 385 aa5.87□□□□□ -1.47
PRKDC-201ENST00000314191 FAAHO00519 579 aa5.87□□□□□ -1.47
PRKDC-201ENST00000314191 GAPDHSO14556 408 aaPredicted RBP5.87□□□□□ -1.47
PRKDC-201ENST00000314191 PCDH17O14917 1159 aa5.87□□□□□ -1.47
PRKDC-201ENST00000314191 NPC1O15118 1278 aa5.87□□□□□ -1.47
PRKDC-201ENST00000314191 TMBIM6P55061 237 aa5.87□□□□□ -1.47
PRKDC-201ENST00000314191 SPRED2Q7Z698 418 aa5.87□□□□□ -1.47
PRKDC-201ENST00000314191 LHFPL3Q86UP9 236 aa5.87□□□□□ -1.47
PRKDC-201ENST00000314191 TSPYL5Q86VY4 417 aaPredicted RBP5.87□□□□□ -1.47
PRKDC-201ENST00000314191 ADAMTS19Q8TE59 1207 aa5.87□□□□□ -1.47
PRKDC-201ENST00000314191 C8orf33Q9H7E9 229 aaPredicted RBP5.87□□□□□ -1.47
PRKDC-201ENST00000314191 CBLP22681 906 aa5.87□□□□□ -1.47
PRKDC-201ENST00000314191 SLC5A2P31639 672 aa5.87□□□□□ -1.47
PRKDC-201ENST00000314191 NCS1P62166 190 aa5.87□□□□□ -1.47
PRKDC-201ENST00000314191 QPRTQ15274 297 aa5.87□□□□□ -1.47
PRKDC-201ENST00000314191 FAM83HQ6ZRV2 1179 aaPredicted RBP5.87□□□□□ -1.47
PRKDC-201ENST00000314191 FGD2Q7Z6J4 655 aa5.87□□□□□ -1.47
PRKDC-201ENST00000314191 TMEM80Q96HE8 168 aa5.87□□□□□ -1.47
PRKDC-201ENST00000314191 DGAT2Q96PD7 388 aa5.87□□□□□ -1.47
PRKDC-201ENST00000314191 MBD1Q9UIS9 605 aaPredicted RBP5.87□□□□□ -1.47
PRKDC-201ENST00000314191 COQ9O75208 318 aa5.87□□□□□ -1.47
PRKDC-201ENST00000314191 AGR2O95994 175 aa5.87□□□□□ -1.47
PRKDC-201ENST00000314191 HMGN1P05114 100 aa5.87□□□□□ -1.47
PRKDC-201ENST00000314191 FHP07954 510 aa5.87□□□□□ -1.47
PRKDC-201ENST00000314191 AHCYP23526 432 aa5.87□□□□□ -1.47
PRKDC-201ENST00000314191 MAOBP27338 520 aa5.87□□□□□ -1.47
PRKDC-201ENST00000314191 BMP8BP34820 402 aa5.87□□□□□ -1.47
PRKDC-201ENST00000314191 RPL6Q02878 288 aaKnown RBP5.87□□□□□ -1.47
PRKDC-201ENST00000314191 BCL7AQ4VC05 210 aa5.87□□□□□ -1.47
PRKDC-201ENST00000314191 TMEM35AQ53FP2 167 aa5.87□□□□□ -1.47
PRKDC-201ENST00000314191 ZNF385BQ569K4 471 aa5.87□□□□□ -1.47
PRKDC-201ENST00000314191 DDI2Q5TDH0 399 aa5.87□□□□□ -1.47
PRKDC-201ENST00000314191 BMP8AQ7Z5Y6 402 aa5.87□□□□□ -1.47
PRKDC-201ENST00000314191 PEX11GQ96HA9 241 aa5.87□□□□□ -1.47
PRKDC-201ENST00000314191 PTCHD1Q96NR3 888 aa5.87□□□□□ -1.47
PRKDC-201ENST00000314191 TTTY10Q9BZA0 68 aa5.87□□□□□ -1.47
PRKDC-201ENST00000314191 STMN3Q9NZ72 180 aa5.87□□□□□ -1.47
PRKDC-201ENST00000314191 TTLL10Q6ZVT0 673 aa5.87□□□□□ -1.47
PRKDC-201ENST00000314191 UXS1Q8NBZ7 420 aa5.87□□□□□ -1.47
PRKDC-201ENST00000314191 BARD1Q99728 777 aaKnown RBP5.87□□□□□ -1.47
PRKDC-201ENST00000314191 CXorf36Q9H7Y0 433 aa5.87□□□□□ -1.47
PRKDC-201ENST00000314191 HEMK1Q9Y5R4 338 aaPredicted RBP5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms