RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 FUZQ9BT04 418 aa8.44□□□□□ -1.06
COL6A5-202ENST00000312481 SLAMF7Q9NQ25 335 aa8.44□□□□□ -1.06
COL6A5-202ENST00000312481 GPR45Q9Y5Y3 372 aa8.44□□□□□ -1.06
COL6A5-202ENST00000312481 ADAMTSL1Q8N6G6 1762 aa8.44□□□□□ -1.06
COL6A5-202ENST00000312481 INTS1Q8N201 2190 aaKnown RBP8.44□□□□□ -1.06
COL6A5-202ENST00000312481 A6NIZ1 184 aa8.44□□□□□ -1.06
COL6A5-202ENST00000312481 CLEC3AO75596 197 aa8.44□□□□□ -1.06
COL6A5-202ENST00000312481 THEGLP0DJG4 465 aa8.44□□□□□ -1.06
COL6A5-202ENST00000312481 ZNF20P17024 532 aa8.44□□□□□ -1.06
COL6A5-202ENST00000312481 AHRP35869 848 aa8.44□□□□□ -1.06
COL6A5-202ENST00000312481 ENTPD1P49961 510 aa8.44□□□□□ -1.06
COL6A5-202ENST00000312481 RNF144AP50876 292 aaPredicted RBP8.44□□□□□ -1.06
COL6A5-202ENST00000312481 RAP1BP61224 184 aa8.44□□□□□ -1.06
COL6A5-202ENST00000312481 RAP1AP62834 184 aa8.44□□□□□ -1.06
COL6A5-202ENST00000312481 BEST4Q8NFU0 473 aa8.44□□□□□ -1.06
COL6A5-202ENST00000312481 ANGPTL6Q8NI99 470 aa8.44□□□□□ -1.06
COL6A5-202ENST00000312481 MRGPRX2Q96LB1 330 aa8.44□□□□□ -1.06
COL6A5-202ENST00000312481 ZNF717Q9BY31 904 aaPredicted RBP8.44□□□□□ -1.06
COL6A5-202ENST00000312481 IQCMA0A1B0GVH7 501 aa8.44□□□□□ -1.06
COL6A5-202ENST00000312481 A0A1W2PRQ8 180 aa8.44□□□□□ -1.06
COL6A5-202ENST00000312481 SLC33A1O00400 549 aaPredicted RBP8.44□□□□□ -1.06
COL6A5-202ENST00000312481 AURKAO14965 403 aa8.44□□□□□ -1.06
COL6A5-202ENST00000312481 SNAPINO95295 136 aa8.44□□□□□ -1.06
COL6A5-202ENST00000312481 ZNF676Q8N7Q3 588 aa8.44□□□□□ -1.06
COL6A5-202ENST00000312481 COPS5Q92905 334 aa8.44□□□□□ -1.06
COL6A5-202ENST00000312481 TMEM125Q96AQ2 219 aa8.44□□□□□ -1.06
COL6A5-202ENST00000312481 PRRC1Q96M27 445 aa8.44□□□□□ -1.06
COL6A5-202ENST00000312481 HIST1H2AAQ96QV6 131 aa8.44□□□□□ -1.06
COL6A5-202ENST00000312481 FERD3LQ96RJ6 166 aa8.44□□□□□ -1.06
COL6A5-202ENST00000312481 RBFOX1Q9NWB1 397 aaKnown RBP8.44□□□□□ -1.06
COL6A5-202ENST00000312481 LAMP5Q9UJQ1 280 aa8.44□□□□□ -1.06
COL6A5-202ENST00000312481 ABCA1O95477 2261 aa8.44□□□□□ -1.06
COL6A5-202ENST00000312481 HOXB9P17482 250 aaPredicted RBP8.44□□□□□ -1.06
COL6A5-202ENST00000312481 ALDH3B2P48448 385 aa8.44□□□□□ -1.06
COL6A5-202ENST00000312481 CRISP1P54107 249 aa8.44□□□□□ -1.06
COL6A5-202ENST00000312481 LCTLQ6UWM7 567 aa8.44□□□□□ -1.06
COL6A5-202ENST00000312481 NRROSQ86YC3 692 aa8.44□□□□□ -1.06
COL6A5-202ENST00000312481 CNPPD1Q9BV87 410 aa8.44□□□□□ -1.06
COL6A5-202ENST00000312481 QRSL1Q9H0R6 528 aaKnown RBP8.44□□□□□ -1.06
COL6A5-202ENST00000312481 IRF2BPLQ9H1B7 796 aa8.44□□□□□ -1.06
COL6A5-202ENST00000312481 BRD7Q9NPI1 651 aa8.44□□□□□ -1.06
COL6A5-202ENST00000312481 MYBPHLA2RUH7 354 aa8.44□□□□□ -1.06
COL6A5-202ENST00000312481 HBQ1P09105 142 aa8.44□□□□□ -1.06
COL6A5-202ENST00000312481 H2AFB2P0C5Z0 115 aa8.44□□□□□ -1.06
COL6A5-202ENST00000312481 CREB1P16220 341 aa8.44□□□□□ -1.06
COL6A5-202ENST00000312481 DNASE1P24855 282 aa8.44□□□□□ -1.06
COL6A5-202ENST00000312481 PBLDP30039 288 aaPredicted RBP8.44□□□□□ -1.06
COL6A5-202ENST00000312481 ART1P52961 327 aa8.44□□□□□ -1.06
COL6A5-202ENST00000312481 RPS21P63220 83 aaKnown RBP8.44□□□□□ -1.06
COL6A5-202ENST00000312481 HSD11B2P80365 405 aa8.44□□□□□ -1.06
COL6A5-202ENST00000312481 CAP1Q01518 475 aa8.44□□□□□ -1.06
COL6A5-202ENST00000312481 TAGLNQ01995 201 aaKnown RBP8.44□□□□□ -1.06
COL6A5-202ENST00000312481 TMEM69Q5SWH9 247 aa8.44□□□□□ -1.06
COL6A5-202ENST00000312481 MRPL10Q7Z7H8 261 aaKnown RBP8.44□□□□□ -1.06
COL6A5-202ENST00000312481 ADGRG5Q8IZF4 528 aa8.44□□□□□ -1.06
COL6A5-202ENST00000312481 HRASLS5Q96KN8 279 aa8.44□□□□□ -1.06
COL6A5-202ENST00000312481 HERPUD2Q9BSE4 406 aa8.44□□□□□ -1.06
COL6A5-202ENST00000312481 LMF2Q9BU23 707 aaKnown RBP8.44□□□□□ -1.06
COL6A5-202ENST00000312481 SLC2A4RGQ9NR83 387 aa8.44□□□□□ -1.06
COL6A5-202ENST00000312481 MBLAC1A4D2B0 266 aaPredicted RBP8.44□□□□□ -1.06
COL6A5-202ENST00000312481 I3L521 148 aa8.44□□□□□ -1.06
COL6A5-202ENST00000312481 PPP3CBP16298 524 aa8.44□□□□□ -1.06
COL6A5-202ENST00000312481 RPL34P49207 117 aaKnown RBP8.44□□□□□ -1.06
COL6A5-202ENST00000312481 TLE3Q04726 772 aa8.44□□□□□ -1.06
COL6A5-202ENST00000312481 ISCA2Q86U28 154 aa8.44□□□□□ -1.06
COL6A5-202ENST00000312481 TMEM145Q8NBT3 493 aa8.44□□□□□ -1.06
COL6A5-202ENST00000312481 UBXN10Q96LJ8 280 aa8.44□□□□□ -1.06
COL6A5-202ENST00000312481 TSSK6Q9BXA6 273 aa8.44□□□□□ -1.06
COL6A5-202ENST00000312481 CLMPQ9H6B4 373 aa8.44□□□□□ -1.06
COL6A5-202ENST00000312481 ENAMQ9NRM1 1142 aa8.44□□□□□ -1.06
COL6A5-202ENST00000312481 UTS2RQ9UKP6 389 aa8.44□□□□□ -1.06
COL6A5-202ENST00000312481 FZD9O00144 591 aa8.43□□□□□ -1.06
COL6A5-202ENST00000312481 CPNE3O75131 537 aaKnown RBP8.43□□□□□ -1.06
COL6A5-202ENST00000312481 LSM3P62310 102 aaKnown RBP8.43□□□□□ -1.06
COL6A5-202ENST00000312481 OR2AJ1Q8NGZ0 328 aa8.43□□□□□ -1.06
COL6A5-202ENST00000312481 C11orf16Q9NQ32 467 aa8.43□□□□□ -1.06
COL6A5-202ENST00000312481 ERVK-19Q9WJR5 959 aa8.43□□□□□ -1.06
COL6A5-202ENST00000312481 DOCK10Q96BY6 2186 aa8.43□□□□□ -1.06
COL6A5-202ENST00000312481 EFCAB7A8K855 629 aa8.43□□□□□ -1.06
COL6A5-202ENST00000312481 H0YIV9 168 aa8.43□□□□□ -1.06
COL6A5-202ENST00000312481 ERAL1O75616 437 aaKnown RBP8.43□□□□□ -1.06
COL6A5-202ENST00000312481 PRKXP51817 358 aa8.43□□□□□ -1.06
COL6A5-202ENST00000312481 VSX2P58304 361 aaPredicted RBP8.43□□□□□ -1.06
COL6A5-202ENST00000312481 DCAF7P61962 342 aa8.43□□□□□ -1.06
COL6A5-202ENST00000312481 AAK1Q2M2I8 961 aa8.43□□□□□ -1.06
COL6A5-202ENST00000312481 C9orf131Q5VYM1 1079 aa8.43□□□□□ -1.06
COL6A5-202ENST00000312481 CEP97Q8IW35 865 aa8.43□□□□□ -1.06
COL6A5-202ENST00000312481 PDGFDQ9GZP0 370 aaPredicted RBP8.43□□□□□ -1.06
COL6A5-202ENST00000312481 SCPEP1Q9HB40 452 aa8.43□□□□□ -1.06
COL6A5-202ENST00000312481 NOX1Q9Y5S8 564 aa8.43□□□□□ -1.06
COL6A5-202ENST00000312481 HLA-DMAP28067 261 aa8.43□□□□□ -1.06
COL6A5-202ENST00000312481 PPP2R2BQ00005 443 aa8.43□□□□□ -1.06
COL6A5-202ENST00000312481 IRF9Q00978 393 aa8.43□□□□□ -1.06
COL6A5-202ENST00000312481 ZNF776Q68DI1 518 aaPredicted RBP8.43□□□□□ -1.06
COL6A5-202ENST00000312481 C22orf39Q6P5X5 142 aa8.43□□□□□ -1.06
COL6A5-202ENST00000312481 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.43□□□□□ -1.06
COL6A5-202ENST00000312481 SLC29A4Q7RTT9 530 aa8.43□□□□□ -1.06
COL6A5-202ENST00000312481 LDB1Q86U70 411 aaPredicted RBP8.43□□□□□ -1.06
COL6A5-202ENST00000312481 ZNF584Q8IVC4 421 aa8.43□□□□□ -1.06
COL6A5-202ENST00000312481 CNOT9Q92600 299 aaKnown RBP8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms