RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 ZNF334Q9HCZ1 680 aaPredicted RBP7.85□□□□□ -1.15
VPS41-202ENST00000310301 TUBG2Q9NRH3 451 aa7.85□□□□□ -1.15
VPS41-202ENST00000310301 CCM2LQ9NUG4 571 aaPredicted RBP7.85□□□□□ -1.15
VPS41-202ENST00000310301 A0A1B0GV50 99 aa7.84□□□□□ -1.15
VPS41-202ENST00000310301 ALAS2P22557 587 aa7.84□□□□□ -1.15
VPS41-202ENST00000310301 ADH6P28332 368 aa7.84□□□□□ -1.15
VPS41-202ENST00000310301 MPIP34949 423 aa7.84□□□□□ -1.15
VPS41-202ENST00000310301 OPRL1P41146 370 aa7.84□□□□□ -1.15
VPS41-202ENST00000310301 CDK10Q15131 360 aa7.84□□□□□ -1.15
VPS41-202ENST00000310301 C22orf39Q6P5X5 142 aa7.84□□□□□ -1.15
VPS41-202ENST00000310301 PIM3Q86V86 326 aa7.84□□□□□ -1.15
VPS41-202ENST00000310301 KCT2Q8NC54 265 aa7.84□□□□□ -1.15
VPS41-202ENST00000310301 OR5T2Q8NGG2 359 aa7.84□□□□□ -1.15
VPS41-202ENST00000310301 TPSD1Q9BZJ3 242 aa7.84□□□□□ -1.15
VPS41-202ENST00000310301 CARS2Q9HA77 564 aaKnown RBP7.84□□□□□ -1.15
VPS41-202ENST00000310301 HEBP1Q9NRV9 189 aa7.84□□□□□ -1.15
VPS41-202ENST00000310301 TMEM45AQ9NWC5 275 aa7.84□□□□□ -1.15
VPS41-202ENST00000310301 GIMAP2Q9UG22 337 aa7.84□□□□□ -1.15
VPS41-202ENST00000310301 FCF1Q9Y324 198 aaKnown RBP7.84□□□□□ -1.15
VPS41-202ENST00000310301 TEX264Q9Y6I9 313 aa7.84□□□□□ -1.15
VPS41-202ENST00000310301 PHIPQ8WWQ0 1821 aa7.84□□□□□ -1.15
VPS41-202ENST00000310301 A0A0G2JN53 185 aa7.84□□□□□ -1.15
VPS41-202ENST00000310301 C2orf74A8MZ97 194 aa7.84□□□□□ -1.15
VPS41-202ENST00000310301 M0R129 80 aa7.84□□□□□ -1.15
VPS41-202ENST00000310301 SGCEO43556 437 aa7.84□□□□□ -1.15
VPS41-202ENST00000310301 HCKP08631 526 aa7.84□□□□□ -1.15
VPS41-202ENST00000310301 CAPN3P20807 821 aa7.84□□□□□ -1.15
VPS41-202ENST00000310301 PROZP22891 400 aa7.84□□□□□ -1.15
VPS41-202ENST00000310301 PIK3CBP42338 1070 aa7.84□□□□□ -1.15
VPS41-202ENST00000310301 NSG1P42857 185 aa7.84□□□□□ -1.15
VPS41-202ENST00000310301 SLC6A9P48067 706 aa7.84□□□□□ -1.15
VPS41-202ENST00000310301 GABARAPL2P60520 117 aa7.84□□□□□ -1.15
VPS41-202ENST00000310301 GK2Q14410 553 aaPredicted RBP7.84□□□□□ -1.15
VPS41-202ENST00000310301 SSX2Q16385 188 aa7.84□□□□□ -1.15
VPS41-202ENST00000310301 KIAA0319Q5VV43 1072 aa7.84□□□□□ -1.15
VPS41-202ENST00000310301 DESI1Q6ICB0 168 aa7.84□□□□□ -1.15
VPS41-202ENST00000310301 TMEM220Q6QAJ8 160 aa7.84□□□□□ -1.15
VPS41-202ENST00000310301 SPATC1Q76KD6 591 aa7.84□□□□□ -1.15
VPS41-202ENST00000310301 MCEMP1Q8IX19 187 aa7.84□□□□□ -1.15
VPS41-202ENST00000310301 ARL14Q8N4G2 192 aa7.84□□□□□ -1.15
VPS41-202ENST00000310301 ZNF709Q8N972 641 aa7.84□□□□□ -1.15
VPS41-202ENST00000310301 OR4F6Q8NGB9 312 aa7.84□□□□□ -1.15
VPS41-202ENST00000310301 SLC22A18Q96BI1 424 aa7.84□□□□□ -1.15
VPS41-202ENST00000310301 PBDC1Q9BVG4 233 aa7.84□□□□□ -1.15
VPS41-202ENST00000310301 LHPPQ9H008 270 aa7.84□□□□□ -1.15
VPS41-202ENST00000310301 SMOXQ9NWM0 555 aa7.84□□□□□ -1.15
VPS41-202ENST00000310301 SIPA1L3O60292 1781 aaPredicted RBP7.84□□□□□ -1.15
VPS41-202ENST00000310301 CD8B2A6NJW9 211 aa7.84□□□□□ -1.15
VPS41-202ENST00000310301 DUXAA6NLW8 204 aa7.84□□□□□ -1.15
VPS41-202ENST00000310301 ZNF705FA8MVS1 300 aaPredicted RBP7.84□□□□□ -1.15
VPS41-202ENST00000310301 UPK3BL1B0FP48 263 aa7.84□□□□□ -1.15
VPS41-202ENST00000310301 UPK3BL2E5RIL1 263 aa7.84□□□□□ -1.15
VPS41-202ENST00000310301 B3GALT2O43825 422 aa7.84□□□□□ -1.15
VPS41-202ENST00000310301 MRPL3P09001 348 aaKnown RBP7.84□□□□□ -1.15
VPS41-202ENST00000310301 ZNF705DP0CH99 300 aaPredicted RBP7.84□□□□□ -1.15
VPS41-202ENST00000310301 ZNF705BP0CI00 300 aaPredicted RBP7.84□□□□□ -1.15
VPS41-202ENST00000310301 C7P10643 843 aa7.84□□□□□ -1.15
VPS41-202ENST00000310301 CD8BP10966 210 aa7.84□□□□□ -1.15
VPS41-202ENST00000310301 BCKDHAP12694 445 aa7.84□□□□□ -1.15
VPS41-202ENST00000310301 ZNF16P17020 682 aaPredicted RBP7.84□□□□□ -1.15
VPS41-202ENST00000310301 CXCR1P25024 350 aa7.84□□□□□ -1.15
VPS41-202ENST00000310301 OR1E2P47887 323 aa7.84□□□□□ -1.15
VPS41-202ENST00000310301 ATP4BP51164 291 aa7.84□□□□□ -1.15
VPS41-202ENST00000310301 KCNQ1P51787 676 aa7.84□□□□□ -1.15
VPS41-202ENST00000310301 NKX6-1P78426 367 aaPredicted RBP7.84□□□□□ -1.15
VPS41-202ENST00000310301 HTRA4P83105 476 aaPredicted RBP7.84□□□□□ -1.15
VPS41-202ENST00000310301 ST3GAL3Q11203 375 aa7.84□□□□□ -1.15
VPS41-202ENST00000310301 SNTB2Q13425 540 aaKnown RBP7.84□□□□□ -1.15
VPS41-202ENST00000310301 PPP1R3AQ16821 1122 aa7.84□□□□□ -1.15
VPS41-202ENST00000310301 PLEKHN1Q494U1 663 aaPredicted RBP7.84□□□□□ -1.15
VPS41-202ENST00000310301 AKR1C8PQ5T2L2 129 aa7.84□□□□□ -1.15
VPS41-202ENST00000310301 BCL2L15Q5TBC7 163 aa7.84□□□□□ -1.15
VPS41-202ENST00000310301 GTF2IRD2BQ6EKJ0 949 aa7.84□□□□□ -1.15
VPS41-202ENST00000310301 CEACAM20Q6UY09 585 aa7.84□□□□□ -1.15
VPS41-202ENST00000310301 GOLGA7Q7Z5G4 137 aa7.84□□□□□ -1.15
VPS41-202ENST00000310301 GTF2IRD2Q86UP8 949 aa7.84□□□□□ -1.15
VPS41-202ENST00000310301 IGFN1Q86VF2 1251 aa7.84□□□□□ -1.15
VPS41-202ENST00000310301 C1orf52Q8N6N3 182 aaKnown RBP7.84□□□□□ -1.15
VPS41-202ENST00000310301 NIPA2Q8N8Q9 360 aa7.84□□□□□ -1.15
VPS41-202ENST00000310301 OR13J1Q8NGT2 312 aa7.84□□□□□ -1.15
VPS41-202ENST00000310301 LRCH3Q96II8 777 aa7.84□□□□□ -1.15
VPS41-202ENST00000310301 DUSP23Q9BVJ7 150 aa7.84□□□□□ -1.15
VPS41-202ENST00000310301 APOBEC3GQ9HC16 384 aaKnown RBP7.84□□□□□ -1.15
VPS41-202ENST00000310301 FAM118AQ9NWS6 357 aa7.84□□□□□ -1.15
VPS41-202ENST00000310301 QPCTLQ9NXS2 382 aa7.84□□□□□ -1.15
VPS41-202ENST00000310301 STUB1Q9UNE7 303 aa7.84□□□□□ -1.15
VPS41-202ENST00000310301 MGAT4BQ9UQ53 548 aa7.84□□□□□ -1.15
VPS41-202ENST00000310301 POLR1CO15160 346 aaPredicted RBP7.84□□□□□ -1.15
VPS41-202ENST00000310301 VILLO15195 856 aa7.84□□□□□ -1.15
VPS41-202ENST00000310301 HSPA12AO43301 675 aa7.84□□□□□ -1.15
VPS41-202ENST00000310301 KLK1P06870 262 aa7.84□□□□□ -1.15
VPS41-202ENST00000310301 HNRNPFP52597 415 aaKnown RBP7.84□□□□□ -1.15
VPS41-202ENST00000310301 HERV-K104P61576 105 aa7.84□□□□□ -1.15
VPS41-202ENST00000310301 NKX3-2P78367 333 aa7.84□□□□□ -1.15
VPS41-202ENST00000310301 SLC7A9P82251 487 aa7.84□□□□□ -1.15
VPS41-202ENST00000310301 DYRK1AQ13627 763 aa7.84□□□□□ -1.15
VPS41-202ENST00000310301 FAM189A2Q15884 450 aa7.84□□□□□ -1.15
VPS41-202ENST00000310301 CYP27C1Q4G0S4 372 aa7.84□□□□□ -1.15
VPS41-202ENST00000310301 SPIN4Q56A73 249 aa7.84□□□□□ -1.15
VPS41-202ENST00000310301 SPANXN4Q5MJ08 99 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms