RNA–Protein interactions for RNA: ENST00000309964.8

CLOCK-201, Transcript of clock circadian regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLOCK, Length 10,304 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-201ENST00000309964 SLAMF9Q96A28 289 aa3.05□□□□□ -1.92
CLOCK-201ENST00000309964 ATP13A2Q9NQ11 1180 aa3.05□□□□□ -1.92
CLOCK-201ENST00000309964 SPHK1Q9NYA1 384 aa3.05□□□□□ -1.92
CLOCK-201ENST00000309964 PGAP2Q9UHJ9 254 aa3.05□□□□□ -1.92
CLOCK-201ENST00000309964 ZNF175Q9Y473 711 aa3.05□□□□□ -1.92
CLOCK-201ENST00000309964 C2orf92A0A1B0GVN3 265 aa3.05□□□□□ -1.92
CLOCK-201ENST00000309964 FAM159BA6NKW6 160 aa3.05□□□□□ -1.92
CLOCK-201ENST00000309964 C4orf47A7E2U8 309 aa3.05□□□□□ -1.92
CLOCK-201ENST00000309964 TISP43B9A030 160 aa3.05□□□□□ -1.92
CLOCK-201ENST00000309964 BTN3A3O00478 584 aa3.05□□□□□ -1.92
CLOCK-201ENST00000309964 OR4F21O95013 312 aa3.05□□□□□ -1.92
CLOCK-201ENST00000309964 ALDOBP05062 364 aa3.05□□□□□ -1.92
CLOCK-201ENST00000309964 KLK1P06870 262 aa3.05□□□□□ -1.92
CLOCK-201ENST00000309964 GKN3PP0CG01 181 aa3.05□□□□□ -1.92
CLOCK-201ENST00000309964 PRKCHP24723 683 aa3.05□□□□□ -1.92
CLOCK-201ENST00000309964 GCH1P30793 250 aa3.05□□□□□ -1.92
CLOCK-201ENST00000309964 ARHGAP8P85298 464 aa3.05□□□□□ -1.92
CLOCK-201ENST00000309964 PCDH1Q08174 1060 aa3.05□□□□□ -1.92
CLOCK-201ENST00000309964 GNMTQ14749 295 aa3.05□□□□□ -1.92
CLOCK-201ENST00000309964 PIGGQ5H8A4 983 aa3.05□□□□□ -1.92
CLOCK-201ENST00000309964 TMEM53Q6P2H8 277 aa3.05□□□□□ -1.92
CLOCK-201ENST00000309964 C16orf46Q6P387 395 aa3.05□□□□□ -1.92
CLOCK-201ENST00000309964 KCTD20Q7Z5Y7 419 aa3.05□□□□□ -1.92
CLOCK-201ENST00000309964 CMC1Q7Z7K0 106 aa3.05□□□□□ -1.92
CLOCK-201ENST00000309964 CCDC71LQ8N9Z2 235 aa3.05□□□□□ -1.92
CLOCK-201ENST00000309964 OR10Q1Q8NGQ4 319 aa3.05□□□□□ -1.92
CLOCK-201ENST00000309964 PROKR1Q8TCW9 393 aa3.05□□□□□ -1.92
CLOCK-201ENST00000309964 ALG3Q92685 438 aa3.05□□□□□ -1.92
CLOCK-201ENST00000309964 FOXRED1Q96CU9 486 aaPredicted RBP3.05□□□□□ -1.92
CLOCK-201ENST00000309964 MYRFLQ96LU7 910 aa3.05□□□□□ -1.92
CLOCK-201ENST00000309964 DPEP3Q9H4B8 488 aa3.05□□□□□ -1.92
CLOCK-201ENST00000309964 ZBTB26Q9HCK0 441 aa3.05□□□□□ -1.92
CLOCK-201ENST00000309964 SRA1Q9HD15 236 aaKnown RBP3.05□□□□□ -1.92
CLOCK-201ENST00000309964 C1GALT1Q9NS00 363 aa3.05□□□□□ -1.92
CLOCK-201ENST00000309964 FBXL3Q9UKT7 428 aa3.05□□□□□ -1.92
CLOCK-201ENST00000309964 EMC9Q9Y3B6 208 aa3.05□□□□□ -1.92
CLOCK-201ENST00000309964 DOCK5Q9H7D0 1870 aa3.05□□□□□ -1.92
CLOCK-201ENST00000309964 ZFC3H1O60293 1989 aaKnown RBP3.05□□□□□ -1.92
CLOCK-201ENST00000309964 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.05□□□□□ -1.925e-10■■■■■ 44.9
CLOCK-201ENST00000309964 FAM170BA6NMN3 283 aa3.05□□□□□ -1.92
CLOCK-201ENST00000309964 SOX1O00570 391 aaPredicted RBP3.05□□□□□ -1.92
CLOCK-201ENST00000309964 BCAT2O15382 392 aaPredicted RBP3.05□□□□□ -1.92
CLOCK-201ENST00000309964 GALR3O60755 368 aaPredicted RBP3.05□□□□□ -1.92
CLOCK-201ENST00000309964 HCKP08631 526 aa3.05□□□□□ -1.92
CLOCK-201ENST00000309964 UBTFL6P0CB48 400 aaPredicted RBP3.05□□□□□ -1.92
CLOCK-201ENST00000309964 VASPP50552 380 aaPredicted RBP3.05□□□□□ -1.92
CLOCK-201ENST00000309964 ADAM15Q13444 863 aa3.05□□□□□ -1.92
CLOCK-201ENST00000309964 RAET1LQ5VY80 246 aa3.05□□□□□ -1.92
CLOCK-201ENST00000309964 REP15Q6BDI9 236 aa3.05□□□□□ -1.92
CLOCK-201ENST00000309964 RAB12Q6IQ22 244 aa3.05□□□□□ -1.92
CLOCK-201ENST00000309964 Q8N402 240 aa3.05□□□□□ -1.92
CLOCK-201ENST00000309964 POU5F2Q8N7G0 328 aa3.05□□□□□ -1.92
CLOCK-201ENST00000309964 IL17RCQ8NAC3 791 aa3.05□□□□□ -1.92
CLOCK-201ENST00000309964 NUP43Q8NFH3 380 aa3.05□□□□□ -1.92
CLOCK-201ENST00000309964 SHKBP1Q8TBC3 707 aa3.05□□□□□ -1.92
CLOCK-201ENST00000309964 ZDHHC1Q8WTX9 485 aa3.05□□□□□ -1.92
CLOCK-201ENST00000309964 NDRG1Q92597 394 aaKnown RBP3.05□□□□□ -1.92
CLOCK-201ENST00000309964 TEPSINQ96N21 525 aa3.05□□□□□ -1.92
CLOCK-201ENST00000309964 MS4A4EQ96PG1 132 aa3.05□□□□□ -1.92
CLOCK-201ENST00000309964 SPIN2AQ99865 258 aa3.05□□□□□ -1.92
CLOCK-201ENST00000309964 SPIN2BQ9BPZ2 258 aa3.05□□□□□ -1.92
CLOCK-201ENST00000309964 ACAD8Q9UKU7 415 aa3.05□□□□□ -1.92
CLOCK-201ENST00000309964 FZD1Q9UP38 647 aa3.05□□□□□ -1.92
CLOCK-201ENST00000309964 HS3ST2Q9Y278 367 aa3.05□□□□□ -1.92
CLOCK-201ENST00000309964 C15orf41Q9Y2V0 281 aa3.05□□□□□ -1.92
CLOCK-201ENST00000309964 LRRC42Q9Y546 428 aa3.05□□□□□ -1.92
CLOCK-201ENST00000309964 LRP5LA4QPB2 252 aa3.05□□□□□ -1.92
CLOCK-201ENST00000309964 FAM155AB1AL88 458 aaPredicted RBP3.05□□□□□ -1.92
CLOCK-201ENST00000309964 CDC40O60508 579 aaKnown RBP eCLIP3.05□□□□□ -1.92
CLOCK-201ENST00000309964 WNT11O96014 354 aa3.05□□□□□ -1.92
CLOCK-201ENST00000309964 S100A6P06703 90 aa3.05□□□□□ -1.92
CLOCK-201ENST00000309964 AOC1P19801 751 aa3.05□□□□□ -1.92
CLOCK-201ENST00000309964 MMP12P39900 470 aa3.05□□□□□ -1.92
CLOCK-201ENST00000309964 SLC25A11Q02978 314 aaKnown RBP3.05□□□□□ -1.92
CLOCK-201ENST00000309964 ZNF92Q03936 586 aa3.05□□□□□ -1.92
CLOCK-201ENST00000309964 QPCTQ16769 361 aa3.05□□□□□ -1.92
CLOCK-201ENST00000309964 PTCRAQ6ISU1 281 aaPredicted RBP3.05□□□□□ -1.92
CLOCK-201ENST00000309964 TRIM74Q86UV6 250 aa3.05□□□□□ -1.92
CLOCK-201ENST00000309964 TRIM73Q86UV7 250 aa3.05□□□□□ -1.92
CLOCK-201ENST00000309964 IQCHQ86VS3 1027 aa3.05□□□□□ -1.92
CLOCK-201ENST00000309964 P2RY8Q86VZ1 359 aa3.05□□□□□ -1.92
CLOCK-201ENST00000309964 OR14A16Q8NHC5 309 aa3.05□□□□□ -1.92
CLOCK-201ENST00000309964 GOT1L1Q8NHS2 421 aaPredicted RBP3.05□□□□□ -1.92
CLOCK-201ENST00000309964 RHBDF1Q96CC6 855 aa3.05□□□□□ -1.92
CLOCK-201ENST00000309964 OR8D2Q9GZM6 311 aa3.05□□□□□ -1.92
CLOCK-201ENST00000309964 NIPAL2Q9H841 368 aa3.05□□□□□ -1.92
CLOCK-201ENST00000309964 PELI2Q9HAT8 420 aa3.05□□□□□ -1.92
CLOCK-201ENST00000309964 NDRG3Q9UGV2 375 aa3.05□□□□□ -1.92
CLOCK-201ENST00000309964 ADAM29Q9UKF5 820 aa3.05□□□□□ -1.92
CLOCK-201ENST00000309964 BTRCQ9Y297 605 aa3.05□□□□□ -1.92
CLOCK-201ENST00000309964 MRPS2Q9Y399 296 aaKnown RBP3.05□□□□□ -1.92
CLOCK-201ENST00000309964 PCDHB14Q9Y5E9 798 aa3.05□□□□□ -1.92
CLOCK-201ENST00000309964 TTC24A2A3L6 582 aaPredicted RBP3.05□□□□□ -1.92
CLOCK-201ENST00000309964 TSPAN4O14817 238 aa3.05□□□□□ -1.92
CLOCK-201ENST00000309964 TFECO14948 347 aaPredicted RBP3.05□□□□□ -1.92
CLOCK-201ENST00000309964 CPNE6O95741 557 aa3.05□□□□□ -1.92
CLOCK-201ENST00000309964 C6P13671 934 aa3.05□□□□□ -1.92
CLOCK-201ENST00000309964 ABOP16442 354 aa3.05□□□□□ -1.92
CLOCK-201ENST00000309964 ZNF8P17098 575 aaPredicted RBP3.05□□□□□ -1.92
CLOCK-201ENST00000309964 PROZP22891 400 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms