RNA–Protein interactions for RNA: ENST00000309877.11

IRF3-201, Transcript of interferon regulatory factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF3, Length 1,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-201ENST00000309877 H3BNX3 289 aa21.18■□□□□ 0.98
IRF3-201ENST00000309877 SESN3P58005 492 aa21.18■□□□□ 0.98
IRF3-201ENST00000309877 TCF15Q12870 199 aa21.18■□□□□ 0.98
IRF3-201ENST00000309877 ADRM1Q16186 407 aa21.18■□□□□ 0.98
IRF3-201ENST00000309877 SYT16Q17RD7 645 aa21.18■□□□□ 0.98
IRF3-201ENST00000309877 MTX3Q5HYI7 312 aa21.18■□□□□ 0.98
IRF3-201ENST00000309877 GCNT6Q5T4J0 391 aa21.18■□□□□ 0.98
IRF3-201ENST00000309877 PTOV1Q86YD1 416 aa21.18■□□□□ 0.98
IRF3-201ENST00000309877 OR51Q1Q8NH59 317 aa21.18■□□□□ 0.98
IRF3-201ENST00000309877 SFXN5Q8TD22 340 aa21.18■□□□□ 0.98
IRF3-201ENST00000309877 YIPF2Q9BWQ6 316 aa21.18■□□□□ 0.98
IRF3-201ENST00000309877 SLC7A5P2Q9GIP4 190 aa21.18■□□□□ 0.98
IRF3-201ENST00000309877 C3orf14Q9HBI5 128 aa21.18■□□□□ 0.98
IRF3-201ENST00000309877 SEMA4GQ9NTN9 838 aa21.18■□□□□ 0.98
IRF3-201ENST00000309877 AP4S1Q9Y587 144 aa21.18■□□□□ 0.98
IRF3-201ENST00000309877 NUP214P35658 2090 aaPredicted RBP21.18■□□□□ 0.98
IRF3-201ENST00000309877 DHRS12A0PJE2 317 aa21.18■□□□□ 0.98
IRF3-201ENST00000309877 CLDN4O14493 209 aa21.18■□□□□ 0.98
IRF3-201ENST00000309877 DSCR3O14972 297 aa21.18■□□□□ 0.98
IRF3-201ENST00000309877 CREG1O75629 220 aa21.18■□□□□ 0.98
IRF3-201ENST00000309877 NUDT7P0C024 238 aa21.18■□□□□ 0.98
IRF3-201ENST00000309877 ATXN8OSP0DMR3 200 aa21.18■□□□□ 0.98
IRF3-201ENST00000309877 PSMA4P25789 261 aaKnown RBP21.18■□□□□ 0.98
IRF3-201ENST00000309877 SLC7A1P30825 629 aa21.18■□□□□ 0.98
IRF3-201ENST00000309877 PRR5P85299 388 aa21.18■□□□□ 0.98
IRF3-201ENST00000309877 TRA2AQ13595 282 aaKnown RBP eCLIP21.18■□□□□ 0.98
IRF3-201ENST00000309877 NAXDQ8IW45 347 aa21.18■□□□□ 0.98
IRF3-201ENST00000309877 ZNF595Q8IYB9 648 aa21.18■□□□□ 0.98
IRF3-201ENST00000309877 C11orf65Q8NCR3 313 aa21.18■□□□□ 0.98
IRF3-201ENST00000309877 PRSS33Q8NF86 280 aa21.18■□□□□ 0.98
IRF3-201ENST00000309877 ADCY4Q8NFM4 1077 aa21.18■□□□□ 0.98
IRF3-201ENST00000309877 ELP4Q96EB1 424 aa21.18■□□□□ 0.98
IRF3-201ENST00000309877 DUS3LQ96G46 650 aaKnown RBP21.18■□□□□ 0.98
IRF3-201ENST00000309877 EFHD1Q9BUP0 239 aa21.18■□□□□ 0.98
IRF3-201ENST00000309877 RXFP3Q9NSD7 469 aa21.18■□□□□ 0.98
IRF3-201ENST00000309877 STOML1Q9UBI4 398 aa21.18■□□□□ 0.98
IRF3-201ENST00000309877 RARRES3Q9UL19 164 aa21.18■□□□□ 0.98
IRF3-201ENST00000309877 TMEM184BQ9Y519 407 aaPredicted RBP21.18■□□□□ 0.98
IRF3-201ENST00000309877 EMC8O43402 210 aa21.17■□□□□ 0.98
IRF3-201ENST00000309877 B4GALT2O60909 372 aa21.17■□□□□ 0.98
IRF3-201ENST00000309877 TNFRSF21O75509 655 aa21.17■□□□□ 0.98
IRF3-201ENST00000309877 GPIP06744 558 aa21.17■□□□□ 0.98
IRF3-201ENST00000309877 CSTF2P33240 577 aaKnown RBP eCLIP21.17■□□□□ 0.98
IRF3-201ENST00000309877 GCGRP47871 477 aa21.17■□□□□ 0.98
IRF3-201ENST00000309877 OR1D4P47884 311 aa21.17■□□□□ 0.98
IRF3-201ENST00000309877 PRKAG1P54619 331 aa21.17■□□□□ 0.98
IRF3-201ENST00000309877 SLC13A2Q13183 592 aa21.17■□□□□ 0.98
IRF3-201ENST00000309877 LTB4RQ15722 352 aa21.17■□□□□ 0.98
IRF3-201ENST00000309877 OR56A1Q8NGH5 318 aa21.17■□□□□ 0.98
IRF3-201ENST00000309877 CANT1Q8WVQ1 401 aa21.17■□□□□ 0.98
IRF3-201ENST00000309877 KAT2AQ92830 837 aa21.17■□□□□ 0.98
IRF3-201ENST00000309877 ANKRD9Q96BM1 317 aaPredicted RBP21.17■□□□□ 0.98
IRF3-201ENST00000309877 TBC1D20Q96BZ9 403 aa21.17■□□□□ 0.98
IRF3-201ENST00000309877 SLC35G5Q96KT7 338 aa21.17■□□□□ 0.98
IRF3-201ENST00000309877 LRFN3Q9BTN0 628 aa21.17■□□□□ 0.98
IRF3-201ENST00000309877 NCDNQ9UBB6 729 aa21.17■□□□□ 0.98
IRF3-201ENST00000309877 PRDM4Q9UKN5 801 aa21.17■□□□□ 0.98
IRF3-201ENST00000309877 SRPK3Q9UPE1 567 aa21.17■□□□□ 0.98
IRF3-201ENST00000309877 AURKCQ9UQB9 309 aa21.17■□□□□ 0.98
IRF3-201ENST00000309877 MYOCOSA0A1B0GUC4 107 aa21.16■□□□□ 0.98
IRF3-201ENST00000309877 A0A1B0GX78 115 aa21.16■□□□□ 0.98
IRF3-201ENST00000309877 TCRBV5S2A0A599 114 aa21.16■□□□□ 0.98
IRF3-201ENST00000309877 FHP07954 510 aa21.16■□□□□ 0.98
IRF3-201ENST00000309877 UMPSP11172 480 aa21.16■□□□□ 0.98
IRF3-201ENST00000309877 IL10P22301 178 aa21.16■□□□□ 0.98
IRF3-201ENST00000309877 MC3RP41968 323 aa21.16■□□□□ 0.98
IRF3-201ENST00000309877 XCR1P46094 333 aa21.16■□□□□ 0.98
IRF3-201ENST00000309877 DSTNP60981 165 aa21.16■□□□□ 0.98
IRF3-201ENST00000309877 RBBP4Q09028 425 aa21.16■□□□□ 0.98
IRF3-201ENST00000309877 VEZF1Q14119 521 aa21.16■□□□□ 0.98
IRF3-201ENST00000309877 CEACAM20Q6UY09 585 aa21.16■□□□□ 0.98
IRF3-201ENST00000309877 NETO1Q8TDF5 533 aa21.16■□□□□ 0.98
IRF3-201ENST00000309877 MAL2Q969L2 176 aa21.16■□□□□ 0.98
IRF3-201ENST00000309877 ZNF304Q9HCX3 659 aa21.16■□□□□ 0.98
IRF3-201ENST00000309877 PRTFDC1Q9NRG1 225 aa21.16■□□□□ 0.98
IRF3-201ENST00000309877 ZNF318Q5VUA4 2279 aa21.16■□□□□ 0.98
IRF3-201ENST00000309877 CTNSO60931 367 aa21.15■□□□□ 0.98
IRF3-201ENST00000309877 CDC123O75794 336 aaPredicted RBP21.15■□□□□ 0.98
IRF3-201ENST00000309877 PCGF2P35227 344 aa21.15■□□□□ 0.98
IRF3-201ENST00000309877 RPS26P62854 115 aaKnown RBP21.15■□□□□ 0.98
IRF3-201ENST00000309877 STX4Q12846 297 aa21.15■□□□□ 0.98
IRF3-201ENST00000309877 ERV3-1Q14264 604 aa21.15■□□□□ 0.98
IRF3-201ENST00000309877 C16orf72Q14CZ0 275 aa21.15■□□□□ 0.98
IRF3-201ENST00000309877 CSRP2Q16527 193 aa21.15■□□□□ 0.98
IRF3-201ENST00000309877 TNFAIP8L2Q6P589 184 aaPredicted RBP21.15■□□□□ 0.98
IRF3-201ENST00000309877 PACS2Q86VP3 889 aa21.15■□□□□ 0.98
IRF3-201ENST00000309877 OR52E4Q8NGH9 312 aa21.15■□□□□ 0.98
IRF3-201ENST00000309877 TMEM38AQ9H6F2 299 aa21.15■□□□□ 0.98
IRF3-201ENST00000309877 CCM2LQ9NUG4 571 aaPredicted RBP21.15■□□□□ 0.98
IRF3-201ENST00000309877 ANAPC2Q9UJX6 822 aa21.15■□□□□ 0.98
IRF3-201ENST00000309877 ATP1B1P05026 303 aa21.15■□□□□ 0.98
IRF3-201ENST00000309877 NT5EP21589 574 aa21.15■□□□□ 0.98
IRF3-201ENST00000309877 MATN1P21941 496 aa21.15■□□□□ 0.98
IRF3-201ENST00000309877 FBLP22087 321 aaKnown RBP21.15■□□□□ 0.98
IRF3-201ENST00000309877 ZFP36L1Q07352 338 aaKnown RBP21.15■□□□□ 0.98
IRF3-201ENST00000309877 C1orf189Q5VU69 101 aa21.15■□□□□ 0.98
IRF3-201ENST00000309877 B3GNT8Q7Z7M8 397 aa21.15■□□□□ 0.98
IRF3-201ENST00000309877 TMEM126BQ8IUX1 230 aa21.15■□□□□ 0.98
IRF3-201ENST00000309877 ADGRG5Q8IZF4 528 aa21.15■□□□□ 0.98
IRF3-201ENST00000309877 HORMAD2Q8N7B1 307 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms