RNA–Protein interactions for RNA: ENST00000309422.6

VEGFB-201, Transcript of vascular endothelial growth factor B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFB, Length 1,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-201ENST00000309422 LRRC25Q8N386 305 aaPredicted RBP18.46■□□□□ 0.55
VEGFB-201ENST00000309422 C16orf78Q8WTQ4 265 aa18.46■□□□□ 0.55
VEGFB-201ENST00000309422 ASB15Q8WXK1 588 aa18.46■□□□□ 0.55
VEGFB-201ENST00000309422 TRIM4Q9C037 500 aa18.46■□□□□ 0.55
VEGFB-201ENST00000309422 BRINP2Q9C0B6 783 aa18.46■□□□□ 0.55
VEGFB-201ENST00000309422 RYDENQ9NUL5 291 aaKnown RBP18.46■□□□□ 0.55
VEGFB-201ENST00000309422 EHD3Q9NZN3 535 aa18.46■□□□□ 0.55
VEGFB-201ENST00000309422 VPS4AQ9UN37 437 aa18.46■□□□□ 0.55
VEGFB-201ENST00000309422 ERVK-11Q9UQG0 969 aa18.46■□□□□ 0.55
VEGFB-201ENST00000309422 ERVK-19Q9WJR5 959 aa18.46■□□□□ 0.55
VEGFB-201ENST00000309422 CFL2Q9Y281 166 aa18.46■□□□□ 0.55
VEGFB-201ENST00000309422 CLDN16Q9Y5I7 305 aa18.46■□□□□ 0.55
VEGFB-201ENST00000309422 OR6C76A6NM76 312 aa18.45■□□□□ 0.54
VEGFB-201ENST00000309422 PIP5K1BO14986 540 aa18.45■□□□□ 0.54
VEGFB-201ENST00000309422 PGRMC2O15173 223 aa18.45■□□□□ 0.54
VEGFB-201ENST00000309422 PRAMEF2O60811 474 aa18.45■□□□□ 0.54
VEGFB-201ENST00000309422 DHRS4L1P0CG22 281 aa18.45■□□□□ 0.54
VEGFB-201ENST00000309422 BGNP21810 368 aa18.45■□□□□ 0.54
VEGFB-201ENST00000309422 MLLT10P55197 1068 aa18.45■□□□□ 0.54
VEGFB-201ENST00000309422 MLF1P58340 268 aa18.45■□□□□ 0.54
VEGFB-201ENST00000309422 OR1C1Q15619 314 aa18.45■□□□□ 0.54
VEGFB-201ENST00000309422 PLEKHN1Q494U1 663 aaPredicted RBP18.45■□□□□ 0.54
VEGFB-201ENST00000309422 NOXRED1Q6NXP6 359 aa18.45■□□□□ 0.54
VEGFB-201ENST00000309422 GPALPP1Q8IXQ4 340 aa18.45■□□□□ 0.54
VEGFB-201ENST00000309422 RAB3IL1Q8TBN0 382 aa18.45■□□□□ 0.54
VEGFB-201ENST00000309422 SLC22A8Q8TCC7 542 aa18.45■□□□□ 0.54
VEGFB-201ENST00000309422 DYDC1Q8WWB3 177 aa18.45■□□□□ 0.54
VEGFB-201ENST00000309422 EXOSC8Q96B26 276 aaKnown RBP18.45■□□□□ 0.54
VEGFB-201ENST00000309422 TLCD1Q96CP7 247 aa18.45■□□□□ 0.54
VEGFB-201ENST00000309422 SENP5Q96HI0 755 aaPredicted RBP18.45■□□□□ 0.54
VEGFB-201ENST00000309422 BBS4Q96RK4 519 aa18.45■□□□□ 0.54
VEGFB-201ENST00000309422 GAL3ST4Q96RP7 486 aa18.45■□□□□ 0.54
VEGFB-201ENST00000309422 MYNNQ9NPC7 610 aa18.45■□□□□ 0.54
VEGFB-201ENST00000309422 LRFN1Q9P244 771 aa18.45■□□□□ 0.54
VEGFB-201ENST00000309422 YARS2Q9Y2Z4 477 aaKnown RBP18.45■□□□□ 0.54
VEGFB-201ENST00000309422 RAP2CQ9Y3L5 183 aa18.45■□□□□ 0.54
VEGFB-201ENST00000309422 PCDHGA10Q9Y5H3 936 aa18.45■□□□□ 0.54
VEGFB-201ENST00000309422 COPG1Q9Y678 874 aaKnown RBP18.45■□□□□ 0.54
VEGFB-201ENST00000309422 A8MVJ9 347 aa18.44■□□□□ 0.54
VEGFB-201ENST00000309422 TMEM233B4DJY2 109 aa18.44■□□□□ 0.54
VEGFB-201ENST00000309422 KALRNO60229 2985 aa18.44■□□□□ 0.54
VEGFB-201ENST00000309422 ITGA10O75578 1167 aa18.44■□□□□ 0.54
VEGFB-201ENST00000309422 H2AFXP16104 143 aaPredicted RBP18.44■□□□□ 0.54
VEGFB-201ENST00000309422 DDCP20711 480 aa18.44■□□□□ 0.54
VEGFB-201ENST00000309422 ASMTP46597 345 aa18.44■□□□□ 0.54
VEGFB-201ENST00000309422 GPR143P51810 404 aa18.44■□□□□ 0.54
VEGFB-201ENST00000309422 C2orf80Q0P641 193 aa18.44■□□□□ 0.54
VEGFB-201ENST00000309422 MAD2L1Q13257 205 aaPredicted RBP18.44■□□□□ 0.54
VEGFB-201ENST00000309422 TUBA3CQ13748 450 aa18.44■□□□□ 0.54
VEGFB-201ENST00000309422 ZNF766Q5HY98 468 aa18.44■□□□□ 0.54
VEGFB-201ENST00000309422 TUBA3EQ6PEY2 450 aa18.44■□□□□ 0.54
VEGFB-201ENST00000309422 VWA5B2Q8N398 1253 aa18.44■□□□□ 0.54
VEGFB-201ENST00000309422 C19orf60Q96EN9 201 aa18.44■□□□□ 0.54
VEGFB-201ENST00000309422 ATP6V1G3Q96LB4 118 aa18.44■□□□□ 0.54
VEGFB-201ENST00000309422 TNFRSF12AQ9NP84 129 aa18.44■□□□□ 0.54
VEGFB-201ENST00000309422 HPF1Q9NWY4 346 aa18.44■□□□□ 0.54
VEGFB-201ENST00000309422 ANKRD10Q9NXR5 420 aa18.44■□□□□ 0.54
VEGFB-201ENST00000309422 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.44■□□□□ 0.54
VEGFB-201ENST00000309422 BOD1L1Q8NFC6 3051 aa18.44■□□□□ 0.54
VEGFB-201ENST00000309422 HMGB1P1B2RPK0 211 aaPredicted RBP18.43■□□□□ 0.54
VEGFB-201ENST00000309422 NPIPB8E9PQR5 432 aa18.43■□□□□ 0.54
VEGFB-201ENST00000309422 DDAH2O95865 285 aa18.43■□□□□ 0.54
VEGFB-201ENST00000309422 MPIP34949 423 aa18.43■□□□□ 0.54
VEGFB-201ENST00000309422 HPCAL1P37235 193 aa18.43■□□□□ 0.54
VEGFB-201ENST00000309422 RPL3P39023 403 aaKnown RBP18.43■□□□□ 0.54
VEGFB-201ENST00000309422 FEN1P39748 380 aaKnown RBP18.43■□□□□ 0.54
VEGFB-201ENST00000309422 RNF4P78317 190 aa18.43■□□□□ 0.54
VEGFB-201ENST00000309422 RAE1P78406 368 aaKnown RBP18.43■□□□□ 0.54
VEGFB-201ENST00000309422 ELOAQ14241 798 aaKnown RBP18.43■□□□□ 0.54
VEGFB-201ENST00000309422 INPP5JQ15735 1006 aaPredicted RBP18.43■□□□□ 0.54
VEGFB-201ENST00000309422 PDCD2Q16342 344 aaPredicted RBP18.43■□□□□ 0.54
VEGFB-201ENST00000309422 FAM219BQ5XKK7 198 aa18.43■□□□□ 0.54
VEGFB-201ENST00000309422 TAGAPQ8N103 731 aa18.43■□□□□ 0.54
VEGFB-201ENST00000309422 CYP4Z2PQ8N1L4 340 aa18.43■□□□□ 0.54
VEGFB-201ENST00000309422 FNDC5Q8NAU1 212 aa18.43■□□□□ 0.54
VEGFB-201ENST00000309422 OR7G1Q8NGA0 311 aa18.43■□□□□ 0.54
VEGFB-201ENST00000309422 NUBPLQ8TB37 319 aa18.43■□□□□ 0.54
VEGFB-201ENST00000309422 TUBGCP3Q96CW5 907 aa18.43■□□□□ 0.54
VEGFB-201ENST00000309422 MYOTQ9UBF9 498 aa18.43■□□□□ 0.54
VEGFB-201ENST00000309422 ZDHHC2Q9UIJ5 367 aa18.43■□□□□ 0.54
VEGFB-201ENST00000309422 EIF3LQ9Y262 564 aaKnown RBP18.43■□□□□ 0.54
VEGFB-201ENST00000309422 CSAG2Q9Y5P2 127 aa18.43■□□□□ 0.54
VEGFB-201ENST00000309422 PTGDR2Q9Y5Y4 395 aa18.43■□□□□ 0.54
VEGFB-201ENST00000309422 COL6A6A6NMZ7 2263 aa18.43■□□□□ 0.54
VEGFB-201ENST00000309422 TLN1Q9Y490 2541 aaKnown RBP18.43■□□□□ 0.54
VEGFB-201ENST00000309422 RASAL1O95294 804 aa18.42■□□□□ 0.54
VEGFB-201ENST00000309422 ATP1B1P05026 303 aa18.42■□□□□ 0.54
VEGFB-201ENST00000309422 HLCSP50747 726 aa18.42■□□□□ 0.54
VEGFB-201ENST00000309422 RPL14P50914 215 aaKnown RBP18.42■□□□□ 0.54
VEGFB-201ENST00000309422 RPUSD3Q6P087 351 aaKnown RBP18.42■□□□□ 0.54
VEGFB-201ENST00000309422 OPN5Q6U736 354 aa18.42■□□□□ 0.54
VEGFB-201ENST00000309422 FAM9CQ8IZT9 166 aa18.42■□□□□ 0.54
VEGFB-201ENST00000309422 BCORP1Q8N888 145 aa18.42■□□□□ 0.54
VEGFB-201ENST00000309422 CATSPER1Q8NEC5 780 aa18.42■□□□□ 0.54
VEGFB-201ENST00000309422 ZNF721Q8TF20 911 aa18.42■□□□□ 0.54
VEGFB-201ENST00000309422 CXorf21Q9HAI6 301 aa18.42■□□□□ 0.54
VEGFB-201ENST00000309422 TIMMDC1Q9NPL8 285 aa18.42■□□□□ 0.54
VEGFB-201ENST00000309422 BSNQ9UPA5 3926 aa18.42■□□□□ 0.54
VEGFB-201ENST00000309422 CAPN14A8MX76 684 aa18.42■□□□□ 0.54
VEGFB-201ENST00000309422 WWP2O00308 870 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms