RNA–Protein interactions for RNA: ENST00000308271.13

USP48-201, Transcript of ubiquitin specific peptidase 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP48, Length 4,595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-201ENST00000308271 OR2A25A4D2G3 310 aa18.44■□□□□ 0.54
USP48-201ENST00000308271 EIF5AL1Q6IS14 154 aaKnown RBP18.44■□□□□ 0.54
USP48-201ENST00000308271 FAM129CQ86XR2 697 aa18.44■□□□□ 0.54
USP48-201ENST00000308271 FTMTQ8N4E7 242 aa18.44■□□□□ 0.54
USP48-201ENST00000308271 OR52E4Q8NGH9 312 aa18.44■□□□□ 0.54
USP48-201ENST00000308271 OR2T35Q8NGX2 323 aa18.44■□□□□ 0.54
USP48-201ENST00000308271 P2RY13Q9BPV8 354 aa18.44■□□□□ 0.54
USP48-201ENST00000308271 AMBRA1Q9C0C7 1298 aa18.44■□□□□ 0.54
USP48-201ENST00000308271 ELL3Q9HB65 397 aaPredicted RBP18.44■□□□□ 0.54
USP48-201ENST00000308271 MBLAC1A4D2B0 266 aaPredicted RBP18.44■□□□□ 0.54
USP48-201ENST00000308271 STC2O76061 302 aa18.44■□□□□ 0.54
USP48-201ENST00000308271 FHP07954 510 aa18.44■□□□□ 0.54
USP48-201ENST00000308271 SLC6A6P31641 620 aa18.44■□□□□ 0.54
USP48-201ENST00000308271 GP2P55259 537 aaKnown RBP18.44■□□□□ 0.54
USP48-201ENST00000308271 RPS26P62854 115 aaKnown RBP18.44■□□□□ 0.54
USP48-201ENST00000308271 SNTA1Q13424 505 aa18.44■□□□□ 0.54
USP48-201ENST00000308271 MS4A15Q8N5U1 240 aa18.44■□□□□ 0.54
USP48-201ENST00000308271 YIPF7Q8N8F6 280 aa18.44■□□□□ 0.54
USP48-201ENST00000308271 OR6C4Q8NGE1 309 aa18.44■□□□□ 0.54
USP48-201ENST00000308271 THAP6Q8TBB0 222 aa18.44■□□□□ 0.54
USP48-201ENST00000308271 RIPOR3Q96MK2 946 aa18.44■□□□□ 0.54
USP48-201ENST00000308271 KXD1Q9BQD3 176 aa18.44■□□□□ 0.54
USP48-201ENST00000308271 LIPT1Q9Y234 373 aa18.44■□□□□ 0.54
USP48-201ENST00000308271 KIAA1551Q9HCM1 1747 aa18.43■□□□□ 0.54
USP48-201ENST00000308271 CHRNB1P11230 501 aa18.43■□□□□ 0.54
USP48-201ENST00000308271 LRRC26Q2I0M4 334 aa18.43■□□□□ 0.54
USP48-201ENST00000308271 MANEALQ5VSG8 457 aa18.43■□□□□ 0.54
USP48-201ENST00000308271 COMMD6Q7Z4G1 85 aa18.43■□□□□ 0.54
USP48-201ENST00000308271 PM20D2Q8IYS1 436 aa18.43■□□□□ 0.54
USP48-201ENST00000308271 SYT14Q8NB59 555 aa18.43■□□□□ 0.54
USP48-201ENST00000308271 C7orf57Q8NEG2 295 aa18.43■□□□□ 0.54
USP48-201ENST00000308271 CTSEP14091 401 aa18.43■□□□□ 0.54
USP48-201ENST00000308271 SSTR4P31391 388 aa18.43■□□□□ 0.54
USP48-201ENST00000308271 SLC11A1P49279 550 aa18.43■□□□□ 0.54
USP48-201ENST00000308271 TBPL1P62380 186 aa18.43■□□□□ 0.54
USP48-201ENST00000308271 CBARPQ8N350 705 aaPredicted RBP18.43■□□□□ 0.54
USP48-201ENST00000308271 TEX26Q8N6G2 289 aa18.43■□□□□ 0.54
USP48-201ENST00000308271 ZNF461Q8TAF7 563 aa18.43■□□□□ 0.54
USP48-201ENST00000308271 ZBED3Q96IU2 234 aaPredicted RBP18.43■□□□□ 0.54
USP48-201ENST00000308271 EGLN2Q96KS0 407 aa18.43■□□□□ 0.54
USP48-201ENST00000308271 MCCC1Q96RQ3 725 aaPredicted RBP18.43■□□□□ 0.54
USP48-201ENST00000308271 IFT46Q9NQC8 304 aa18.43■□□□□ 0.54
USP48-201ENST00000308271 GNG8Q9UK08 70 aa18.43■□□□□ 0.54
USP48-201ENST00000308271 UGT2A1Q9Y4X1 527 aa18.43■□□□□ 0.54
USP48-201ENST00000308271 GSRP00390 522 aa18.43■□□□□ 0.54
USP48-201ENST00000308271 ACADLP28330 430 aa18.43■□□□□ 0.54
USP48-201ENST00000308271 CAMK1Q14012 370 aa18.43■□□□□ 0.54
USP48-201ENST00000308271 CDK10Q15131 360 aa18.43■□□□□ 0.54
USP48-201ENST00000308271 XKR7Q5GH72 579 aa18.43■□□□□ 0.54
USP48-201ENST00000308271 RBM18Q96H35 190 aaKnown RBP18.43■□□□□ 0.54
USP48-201ENST00000308271 CENPOQ9BU64 300 aa18.43■□□□□ 0.54
USP48-201ENST00000308271 C5orf51A6NDU8 294 aa18.42■□□□□ 0.54
USP48-201ENST00000308271 ARHGAP33O14559 1287 aa18.42■□□□□ 0.54
USP48-201ENST00000308271 CCL16O15467 120 aa18.42■□□□□ 0.54
USP48-201ENST00000308271 CREBL2O60519 120 aaPredicted RBP18.42■□□□□ 0.54
USP48-201ENST00000308271 PAHP00439 452 aa18.42■□□□□ 0.54
USP48-201ENST00000308271 RAB12Q6IQ22 244 aa18.42■□□□□ 0.54
USP48-201ENST00000308271 LRRTM4Q86VH4 590 aa18.42■□□□□ 0.54
USP48-201ENST00000308271 PARGQ86W56 976 aa18.42■□□□□ 0.54
USP48-201ENST00000308271 IQCF1Q8N6M8 205 aa18.42■□□□□ 0.54
USP48-201ENST00000308271 DTX3Q8N9I9 347 aa18.42■□□□□ 0.54
USP48-201ENST00000308271 OR5H6Q8NGV6 325 aa18.42■□□□□ 0.54
USP48-201ENST00000308271 FANK1Q8TC84 345 aa18.42■□□□□ 0.54
USP48-201ENST00000308271 C16orf78Q8WTQ4 265 aa18.42■□□□□ 0.54
USP48-201ENST00000308271 NEURL2Q9BR09 285 aa18.42■□□□□ 0.54
USP48-201ENST00000308271 ARL6Q9H0F7 186 aa18.42■□□□□ 0.54
USP48-201ENST00000308271 ANKRD34BA5PLL1 514 aa18.42■□□□□ 0.54
USP48-201ENST00000308271 FXYD1O00168 92 aa18.42■□□□□ 0.54
USP48-201ENST00000308271 ZNF432O94892 652 aa18.42■□□□□ 0.54
USP48-201ENST00000308271 LIPAP38571 399 aa18.42■□□□□ 0.54
USP48-201ENST00000308271 LRRC32Q14392 662 aa18.42■□□□□ 0.54
USP48-201ENST00000308271 CTSL3PQ5NE16 218 aa18.42■□□□□ 0.54
USP48-201ENST00000308271 RPL13AP3Q6NVV1 102 aa18.42■□□□□ 0.54
USP48-201ENST00000308271 DLEU7Q6UYE1 221 aa18.42■□□□□ 0.54
USP48-201ENST00000308271 TRAM1L1Q8N609 369 aa18.42■□□□□ 0.54
USP48-201ENST00000308271 GRHL3Q8TE85 626 aa18.42■□□□□ 0.54
USP48-201ENST00000308271 WFIKKN2Q8TEU8 576 aa18.42■□□□□ 0.54
USP48-201ENST00000308271 GLYATL1Q969I3 302 aa18.42■□□□□ 0.54
USP48-201ENST00000308271 PPP1R14AQ96A00 147 aa18.42■□□□□ 0.54
USP48-201ENST00000308271 GAL3ST1Q99999 423 aa18.42■□□□□ 0.54
USP48-201ENST00000308271 SYNDIG1Q9H7V2 258 aa18.42■□□□□ 0.54
USP48-201ENST00000308271 KLHL42Q9P2K6 505 aa18.42■□□□□ 0.54
USP48-201ENST00000308271 SLC22A31A6NKX4 558 aa18.42■□□□□ 0.54
USP48-201ENST00000308271 ELOA3DA6NLF2 546 aaPredicted RBP18.42■□□□□ 0.54
USP48-201ENST00000308271 ZNF670-ZNF695F2Z2N8 137 aa18.42■□□□□ 0.54
USP48-201ENST00000308271 PRODHO43272 600 aa18.42■□□□□ 0.54
USP48-201ENST00000308271 PTHP01270 115 aa18.42■□□□□ 0.54
USP48-201ENST00000308271 ALPPL2P10696 532 aa18.42■□□□□ 0.54
USP48-201ENST00000308271 NDUFV2P19404 249 aa18.42■□□□□ 0.54
USP48-201ENST00000308271 ELOA3BQ3SY89 546 aa18.42■□□□□ 0.54
USP48-201ENST00000308271 ANKK1Q8NFD2 765 aa18.42■□□□□ 0.54
USP48-201ENST00000308271 ELOA3Q8NG57 546 aa18.42■□□□□ 0.54
USP48-201ENST00000308271 ECHDC3Q96DC8 303 aa18.42■□□□□ 0.54
USP48-201ENST00000308271 TM9SF2Q99805 663 aa18.42■□□□□ 0.54
USP48-201ENST00000308271 ZNF385DQ9H6B1 395 aa18.42■□□□□ 0.54
USP48-201ENST00000308271 TARM1B6A8C7 271 aa18.42■□□□□ 0.54
USP48-201ENST00000308271 EPHX1P07099 455 aa18.42■□□□□ 0.54
USP48-201ENST00000308271 SBK3P0C264 359 aa18.42■□□□□ 0.54
USP48-201ENST00000308271 PYCR1P32322 319 aa18.42■□□□□ 0.54
USP48-201ENST00000308271 MAP3K8P41279 467 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms