RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 TACO1Q9BSH4 297 aaKnown RBP6.55□□□□□ -1.36
PTCD2-201ENST00000308077 NPLQ9BXD5 320 aaPredicted RBP6.55□□□□□ -1.36
PTCD2-201ENST00000308077 LRRN3Q9H3W5 708 aa6.55□□□□□ -1.36
PTCD2-201ENST00000308077 NEUROD4Q9HD90 331 aa6.55□□□□□ -1.36
PTCD2-201ENST00000308077 ENAMQ9NRM1 1142 aa6.55□□□□□ -1.36
PTCD2-201ENST00000308077 HCN3Q9P1Z3 774 aa6.55□□□□□ -1.36
PTCD2-201ENST00000308077 PDP2Q9P2J9 529 aa6.55□□□□□ -1.36
PTCD2-201ENST00000308077 BCAP29Q9UHQ4 241 aa6.55□□□□□ -1.36
PTCD2-201ENST00000308077 MAGEL2Q9UJ55 1249 aa6.55□□□□□ -1.36
PTCD2-201ENST00000308077 ENTPD4Q9Y227 616 aa6.55□□□□□ -1.36
PTCD2-201ENST00000308077 SNX8Q9Y5X2 465 aa6.55□□□□□ -1.36
PTCD2-201ENST00000308077 COL5A1P20908 1838 aaPredicted RBP6.55□□□□□ -1.36
PTCD2-201ENST00000308077 PCNX1Q96RV3 2341 aa6.55□□□□□ -1.36
PTCD2-201ENST00000308077 IGHV5-10-1A0A0J9YXX1 117 aa6.55□□□□□ -1.36
PTCD2-201ENST00000308077 MYOCOSA0A1B0GUC4 107 aa6.55□□□□□ -1.36
PTCD2-201ENST00000308077 CXCR6O00574 342 aa6.55□□□□□ -1.36
PTCD2-201ENST00000308077 CHST10O43529 356 aa6.55□□□□□ -1.36
PTCD2-201ENST00000308077 FGF17O60258 216 aa6.55□□□□□ -1.36
PTCD2-201ENST00000308077 TNFRSF21O75509 655 aa6.55□□□□□ -1.36
PTCD2-201ENST00000308077 NSA2O95478 260 aaKnown RBP6.55□□□□□ -1.36
PTCD2-201ENST00000308077 CPNE6O95741 557 aa6.55□□□□□ -1.36
PTCD2-201ENST00000308077 ZNF883P0CG24 379 aa6.55□□□□□ -1.36
PTCD2-201ENST00000308077 CSNK2A2P19784 350 aaPredicted RBP6.55□□□□□ -1.36
PTCD2-201ENST00000308077 PPIBP23284 216 aaKnown RBP6.55□□□□□ -1.36
PTCD2-201ENST00000308077 SOX18P35713 384 aa6.55□□□□□ -1.36
PTCD2-201ENST00000308077 CHI3L1P36222 383 aaPredicted RBP6.55□□□□□ -1.36
PTCD2-201ENST00000308077 ARL4DP49703 201 aa6.55□□□□□ -1.36
PTCD2-201ENST00000308077 POLE2P56282 527 aa6.55□□□□□ -1.36
PTCD2-201ENST00000308077 DAB2P98082 770 aa6.55□□□□□ -1.36
PTCD2-201ENST00000308077 MAT1AQ00266 395 aaKnown RBP6.55□□□□□ -1.36
PTCD2-201ENST00000308077 SLC34A1Q06495 639 aa6.55□□□□□ -1.36
PTCD2-201ENST00000308077 FAM53BQ14153 422 aa6.55□□□□□ -1.36
PTCD2-201ENST00000308077 SF3A2Q15428 464 aaKnown RBP6.55□□□□□ -1.36
PTCD2-201ENST00000308077 LTB4RQ15722 352 aa6.55□□□□□ -1.36
PTCD2-201ENST00000308077 NDUFA9Q16795 377 aa6.55□□□□□ -1.36
PTCD2-201ENST00000308077 CYP51A1Q16850 503 aa6.55□□□□□ -1.36
PTCD2-201ENST00000308077 SYT16Q17RD7 645 aa6.55□□□□□ -1.36
PTCD2-201ENST00000308077 VMACQ2NL98 169 aa6.55□□□□□ -1.36
PTCD2-201ENST00000308077 GARNL3Q5VVW2 1013 aa6.55□□□□□ -1.36
PTCD2-201ENST00000308077 ANGPTL8Q6UXH0 198 aa6.55□□□□□ -1.36
PTCD2-201ENST00000308077 ARHGAP22Q7Z5H3 698 aa6.55□□□□□ -1.36
PTCD2-201ENST00000308077 PROSER1Q86XN7 944 aa6.55□□□□□ -1.36
PTCD2-201ENST00000308077 RNF130Q86XS8 419 aa6.55□□□□□ -1.36
PTCD2-201ENST00000308077 KMT5CQ86Y97 462 aa6.55□□□□□ -1.36
PTCD2-201ENST00000308077 ADGRG5Q8IZF4 528 aa6.55□□□□□ -1.36
PTCD2-201ENST00000308077 LILRA2Q8N149 483 aa6.55□□□□□ -1.36
PTCD2-201ENST00000308077 METTL27Q8N6F8 245 aaPredicted RBP6.55□□□□□ -1.36
PTCD2-201ENST00000308077 RCBTB1Q8NDN9 531 aa6.55□□□□□ -1.36
PTCD2-201ENST00000308077 OR4D9Q8NGE8 314 aa6.55□□□□□ -1.36
PTCD2-201ENST00000308077 OR52N2Q8NGI0 321 aa6.55□□□□□ -1.36
PTCD2-201ENST00000308077 N4BP2L2Q92802 583 aaPredicted RBP6.55□□□□□ -1.36
PTCD2-201ENST00000308077 MAL2Q969L2 176 aa6.55□□□□□ -1.36
PTCD2-201ENST00000308077 ZNF501Q96CX3 271 aaPredicted RBP6.55□□□□□ -1.36
PTCD2-201ENST00000308077 NEURL3Q96EH8 262 aa6.55□□□□□ -1.36
PTCD2-201ENST00000308077 BBS4Q96RK4 519 aa6.55□□□□□ -1.36
PTCD2-201ENST00000308077 RBCK1Q9BYM8 510 aa6.55□□□□□ -1.36
PTCD2-201ENST00000308077 SERHL2Q9H4I8 314 aa6.55□□□□□ -1.36
PTCD2-201ENST00000308077 GORASP2Q9H8Y8 452 aa6.55□□□□□ -1.36
PTCD2-201ENST00000308077 DNAAF2Q9NVR5 837 aaKnown RBP6.55□□□□□ -1.36
PTCD2-201ENST00000308077 IRAK4Q9NWZ3 460 aa6.55□□□□□ -1.36
PTCD2-201ENST00000308077 MS4A12Q9NXJ0 267 aa6.55□□□□□ -1.36
PTCD2-201ENST00000308077 RAB23Q9ULC3 237 aa6.55□□□□□ -1.36
PTCD2-201ENST00000308077 MAP4K5Q9Y4K4 846 aa6.55□□□□□ -1.36
PTCD2-201ENST00000308077 FER1L5A0AVI2 2057 aa6.54□□□□□ -1.36
PTCD2-201ENST00000308077 GSTA4O15217 222 aa6.54□□□□□ -1.36
PTCD2-201ENST00000308077 TOX3O15405 576 aaPredicted RBP6.54□□□□□ -1.36
PTCD2-201ENST00000308077 HYAL3O43820 417 aaPredicted RBP6.54□□□□□ -1.36
PTCD2-201ENST00000308077 LDB3O75112 727 aa6.54□□□□□ -1.36
PTCD2-201ENST00000308077 CREG1O75629 220 aa6.54□□□□□ -1.36
PTCD2-201ENST00000308077 OR2B3O76000 313 aa6.54□□□□□ -1.36
PTCD2-201ENST00000308077 STAMBPO95630 424 aa6.54□□□□□ -1.36
PTCD2-201ENST00000308077 BAG2O95816 211 aa6.54□□□□□ -1.36
PTCD2-201ENST00000308077 ANKRD34CP0C6C1 535 aa6.54□□□□□ -1.36
PTCD2-201ENST00000308077 MSL3P1P0C860 447 aa6.54□□□□□ -1.36
PTCD2-201ENST00000308077 SLC7A1P30825 629 aa6.54□□□□□ -1.36
PTCD2-201ENST00000308077 TLX1P31314 330 aaPredicted RBP6.54□□□□□ -1.36
PTCD2-201ENST00000308077 CRATP43155 626 aa6.54□□□□□ -1.36
PTCD2-201ENST00000308077 PTDSS1P48651 473 aaKnown RBP6.54□□□□□ -1.36
PTCD2-201ENST00000308077 RPS26P62854 115 aaKnown RBP6.54□□□□□ -1.36
PTCD2-201ENST00000308077 ID2Q02363 134 aa6.54□□□□□ -1.36
PTCD2-201ENST00000308077 FOLH1Q04609 750 aa6.54□□□□□ -1.36
PTCD2-201ENST00000308077 SPIDRQ14159 915 aa6.54□□□□□ -1.36
PTCD2-201ENST00000308077 GRM7Q14831 915 aa6.54□□□□□ -1.36
PTCD2-201ENST00000308077 AASDHQ4L235 1098 aaPredicted RBP6.54□□□□□ -1.36
PTCD2-201ENST00000308077 LAIR1Q6GTX8 287 aa6.54□□□□□ -1.36
PTCD2-201ENST00000308077 ZFP1Q6P2D0 407 aa6.54□□□□□ -1.36
PTCD2-201ENST00000308077 C6orf120Q7Z4R8 191 aa6.54□□□□□ -1.36
PTCD2-201ENST00000308077 GALNT10Q86SR1 603 aa6.54□□□□□ -1.36
PTCD2-201ENST00000308077 KBTBD2Q8IY47 623 aa6.54□□□□□ -1.36
PTCD2-201ENST00000308077 HORMAD2Q8N7B1 307 aa6.54□□□□□ -1.36
PTCD2-201ENST00000308077 FAM86B1Q8N7N1 296 aa6.54□□□□□ -1.36
PTCD2-201ENST00000308077 TTC29Q8NA56 475 aaPredicted RBP6.54□□□□□ -1.36
PTCD2-201ENST00000308077 SUMF1Q8NBK3 374 aa6.54□□□□□ -1.36
PTCD2-201ENST00000308077 TNIP2Q8NFZ5 429 aa6.54□□□□□ -1.36
PTCD2-201ENST00000308077 OR9A2Q8NGT5 310 aa6.54□□□□□ -1.36
PTCD2-201ENST00000308077 ZFP28Q8NHY6 868 aa6.54□□□□□ -1.36
PTCD2-201ENST00000308077 GATA6Q92908 595 aa6.54□□□□□ -1.36
PTCD2-201ENST00000308077 ANKRD9Q96BM1 317 aaPredicted RBP6.54□□□□□ -1.36
PTCD2-201ENST00000308077 MMABQ96EY8 250 aaPredicted RBP6.54□□□□□ -1.36
PTCD2-201ENST00000308077 CNDP2Q96KP4 475 aaKnown RBP6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms