RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 FUZQ9BT04 418 aa15.22■□□□□ 0.03
USP42-201ENST00000306177 WACQ9BTA9 647 aa15.22■□□□□ 0.03
USP42-201ENST00000306177 FAM118AQ9NWS6 357 aa15.22■□□□□ 0.03
USP42-201ENST00000306177 ERVK-18Q9QC07 812 aa15.22■□□□□ 0.03
USP42-201ENST00000306177 SUSD2Q9UGT4 822 aa15.22■□□□□ 0.03
USP42-201ENST00000306177 TPD52L2O43399 206 aaKnown RBP15.22■□□□□ 0.03
USP42-201ENST00000306177 ETFAP13804 333 aa15.22■□□□□ 0.03
USP42-201ENST00000306177 MAP2K4P45985 399 aa15.22■□□□□ 0.03
USP42-201ENST00000306177 METTL2BQ6P1Q9 378 aaKnown RBP15.22■□□□□ 0.03
USP42-201ENST00000306177 KCTD18Q6PI47 426 aaPredicted RBP15.22■□□□□ 0.03
USP42-201ENST00000306177 ARHGAP12Q8IWW6 846 aa15.22■□□□□ 0.03
USP42-201ENST00000306177 CPXM2Q8N436 756 aa15.22■□□□□ 0.03
USP42-201ENST00000306177 INO80EQ8NBZ0 244 aaPredicted RBP15.22■□□□□ 0.03
USP42-201ENST00000306177 MDGA1Q8NFP4 955 aa15.22■□□□□ 0.03
USP42-201ENST00000306177 APIPQ96GX9 242 aa15.22■□□□□ 0.03
USP42-201ENST00000306177 MYRFLQ96LU7 910 aa15.22■□□□□ 0.03
USP42-201ENST00000306177 ZNF717Q9BY31 904 aaPredicted RBP15.22■□□□□ 0.03
USP42-201ENST00000306177 SDR39U1Q9NRG7 319 aaPredicted RBP15.22■□□□□ 0.03
USP42-201ENST00000306177 HSPE1-MOB4S4R3N1 261 aa15.22■□□□□ 0.03
USP42-201ENST00000306177 C11orf98E9PRG8 122 aa15.21■□□□□ 0.03
USP42-201ENST00000306177 H3BSH0 61 aa15.21■□□□□ 0.03
USP42-201ENST00000306177 SLC19A2O60779 497 aa15.21■□□□□ 0.03
USP42-201ENST00000306177 TMEM225Q6GV28 225 aa15.21■□□□□ 0.03
USP42-201ENST00000306177 LETMD1Q6P1Q0 360 aa15.21■□□□□ 0.03
USP42-201ENST00000306177 TAS1R1Q7RTX1 841 aa15.21■□□□□ 0.03
USP42-201ENST00000306177 UBE2Q1Q7Z7E8 422 aa15.21■□□□□ 0.03
USP42-201ENST00000306177 DEFB126Q9BYW3 111 aa15.21■□□□□ 0.03
USP42-201ENST00000306177 TTTY10Q9BZA0 68 aa15.21■□□□□ 0.03
USP42-201ENST00000306177 ENAMQ9NRM1 1142 aa15.21■□□□□ 0.03
USP42-201ENST00000306177 NOX1Q9Y5S8 564 aa15.21■□□□□ 0.03
USP42-201ENST00000306177 HTR3EA5X5Y0 456 aa15.21■□□□□ 0.03
USP42-201ENST00000306177 SCO2O43819 266 aa15.21■□□□□ 0.03
USP42-201ENST00000306177 SLITRK5O94991 958 aa15.21■□□□□ 0.03
USP42-201ENST00000306177 IFNA21P01568 189 aa15.21■□□□□ 0.03
USP42-201ENST00000306177 LRIT3Q3SXY7 679 aa15.21■□□□□ 0.03
USP42-201ENST00000306177 ZNF542PQ5EBM4 170 aa15.21■□□□□ 0.03
USP42-201ENST00000306177 MPP7Q5T2T1 576 aa15.21■□□□□ 0.03
USP42-201ENST00000306177 CST9Q5W186 159 aa15.21■□□□□ 0.03
USP42-201ENST00000306177 GTF2IRD2BQ6EKJ0 949 aa15.21■□□□□ 0.03
USP42-201ENST00000306177 GTF2IRD2Q86UP8 949 aa15.21■□□□□ 0.03
USP42-201ENST00000306177 ISG20Q96AZ6 181 aaKnown RBP15.21■□□□□ 0.03
USP42-201ENST00000306177 ECHDC3Q96DC8 303 aa15.21■□□□□ 0.03
USP42-201ENST00000306177 HCFC1R1Q9NWW0 138 aa15.21■□□□□ 0.03
USP42-201ENST00000306177 BAIAP2Q9UQB8 552 aa15.21■□□□□ 0.03
USP42-201ENST00000306177 USP3Q9Y6I4 520 aa15.21■□□□□ 0.03
USP42-201ENST00000306177 MYOCOSA0A1B0GUC4 107 aa15.21■□□□□ 0.03
USP42-201ENST00000306177 OR6C70A6NIJ9 312 aa15.21■□□□□ 0.03
USP42-201ENST00000306177 OR2AT4A6NND4 320 aa15.21■□□□□ 0.03
USP42-201ENST00000306177 SCGNO76038 276 aa15.21■□□□□ 0.03
USP42-201ENST00000306177 SEMA4FO95754 770 aa15.21■□□□□ 0.03
USP42-201ENST00000306177 APOC1P02654 83 aa15.21■□□□□ 0.03
USP42-201ENST00000306177 SPARCP09486 303 aa15.21■□□□□ 0.03
USP42-201ENST00000306177 ZNF182P17025 639 aaPredicted RBP15.21■□□□□ 0.03
USP42-201ENST00000306177 RABIFP47224 123 aa15.21■□□□□ 0.03
USP42-201ENST00000306177 ZNF45Q02386 682 aa15.21■□□□□ 0.03
USP42-201ENST00000306177 PRKCDQ05655 676 aa15.21■□□□□ 0.03
USP42-201ENST00000306177 NNATQ16517 81 aa15.21■□□□□ 0.03
USP42-201ENST00000306177 CTC1Q2NKJ3 1217 aa15.21■□□□□ 0.03
USP42-201ENST00000306177 FIGLAQ6QHK4 219 aa15.21■□□□□ 0.03
USP42-201ENST00000306177 GPAT4Q86UL3 456 aa15.21■□□□□ 0.03
USP42-201ENST00000306177 SECISBP2Q96T21 854 aaKnown RBP15.21■□□□□ 0.03
USP42-201ENST00000306177 TAS2R10Q9NYW0 307 aa15.21■□□□□ 0.03
USP42-201ENST00000306177 COL16A1Q07092 1604 aaPredicted RBP15.21■□□□□ 0.03
USP42-201ENST00000306177 PRRC2BQ5JSZ5 2229 aaKnown RBP15.21■□□□□ 0.02
USP42-201ENST00000306177 A0A1W2PPL8 197 aa15.21■□□□□ 0.02
USP42-201ENST00000306177 KANTRA0A1W2PQU2 76 aa15.21■□□□□ 0.02
USP42-201ENST00000306177 SMIM30A4D0T7 59 aa15.21■□□□□ 0.02
USP42-201ENST00000306177 NME4O00746 187 aa15.21■□□□□ 0.02
USP42-201ENST00000306177 AURKAO14965 403 aa15.21■□□□□ 0.02
USP42-201ENST00000306177 S1PR1P21453 382 aa15.21■□□□□ 0.02
USP42-201ENST00000306177 GBX1Q14549 363 aa15.21■□□□□ 0.02
USP42-201ENST00000306177 LRIF1Q5T3J3 769 aa15.21■□□□□ 0.02
USP42-201ENST00000306177 HMGN2P46Q86SG4 172 aa15.21■□□□□ 0.02
USP42-201ENST00000306177 TMEM19Q96HH6 336 aa15.21■□□□□ 0.02
USP42-201ENST00000306177 C4AP0C0L4 1744 aa15.21■□□□□ 0.02
USP42-201ENST00000306177 SOCS2O14508 198 aa15.2■□□□□ 0.02
USP42-201ENST00000306177 SMAD6O43541 496 aaKnown RBP15.2■□□□□ 0.02
USP42-201ENST00000306177 DENRO43583 198 aaKnown RBP15.2■□□□□ 0.02
USP42-201ENST00000306177 S100A6P06703 90 aa15.2■□□□□ 0.02
USP42-201ENST00000306177 CKMT1AP12532 417 aa15.2■□□□□ 0.02
USP42-201ENST00000306177 DCKP27707 260 aa15.2■□□□□ 0.02
USP42-201ENST00000306177 HLCSP50747 726 aa15.2■□□□□ 0.02
USP42-201ENST00000306177 LIPKQ5VXJ0 399 aa15.2■□□□□ 0.02
USP42-201ENST00000306177 HTR3DQ70Z44 454 aa15.2■□□□□ 0.02
USP42-201ENST00000306177 OR8H3Q8N146 312 aa15.2■□□□□ 0.02
USP42-201ENST00000306177 THAP4Q8WY91 577 aa15.2■□□□□ 0.02
USP42-201ENST00000306177 BRF2Q9HAW0 419 aa15.2■□□□□ 0.02
USP42-201ENST00000306177 TREX1Q9NSU2 369 aa15.2■□□□□ 0.02
USP42-201ENST00000306177 ADAMTS4O75173 837 aa15.2■□□□□ 0.02
USP42-201ENST00000306177 KDM4BO94953 1096 aa15.2■□□□□ 0.02
USP42-201ENST00000306177 KCNJ5P48544 419 aa15.2■□□□□ 0.02
USP42-201ENST00000306177 HK3P52790 923 aa15.2■□□□□ 0.02
USP42-201ENST00000306177 SLC14A2Q15849 920 aa15.2■□□□□ 0.02
USP42-201ENST00000306177 ASRGL1Q7L266 308 aa15.2■□□□□ 0.02
USP42-201ENST00000306177 ZNF440Q8IYI8 595 aa15.2■□□□□ 0.02
USP42-201ENST00000306177 PNPLA1Q8N8W4 532 aa15.2■□□□□ 0.02
USP42-201ENST00000306177 NEIL3Q8TAT5 605 aa15.2■□□□□ 0.02
USP42-201ENST00000306177 SGCDQ92629 289 aa15.2■□□□□ 0.02
USP42-201ENST00000306177 KIAA1143Q96AT1 154 aaPredicted RBP15.2■□□□□ 0.02
USP42-201ENST00000306177 CDCA3Q99618 268 aaPredicted RBP15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms