RNA–Protein interactions for RNA: ENST00000302206.9

TPM3-202, Transcript of tropomyosin 3, humanhuman

TSL 3 BASIC

Gene TPM3, Length 741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-202ENST00000302206 DNAJC22Q8N4W6 341 aa11.32□□□□□ -0.6
TPM3-202ENST00000302206 DHRSXQ8N5I4 330 aa11.32□□□□□ -0.6
TPM3-202ENST00000302206 CSNK1A1LQ8N752 337 aa11.32□□□□□ -0.6
TPM3-202ENST00000302206 HORMAD2Q8N7B1 307 aa11.32□□□□□ -0.6
TPM3-202ENST00000302206 SUN3Q8TAQ9 357 aa11.32□□□□□ -0.6
TPM3-202ENST00000302206 KLHL6Q8WZ60 621 aa11.32□□□□□ -0.6
TPM3-202ENST00000302206 TCTN2Q96GX1 697 aa11.32□□□□□ -0.6
TPM3-202ENST00000302206 SLC35G5Q96KT7 338 aa11.32□□□□□ -0.6
TPM3-202ENST00000302206 C7orf34Q96L11 122 aa11.32□□□□□ -0.6
TPM3-202ENST00000302206 CNBD2Q96M20 576 aa11.32□□□□□ -0.6
TPM3-202ENST00000302206 ZNF347Q96SE7 839 aa11.32□□□□□ -0.6
TPM3-202ENST00000302206 CD180Q99467 661 aa11.32□□□□□ -0.6
TPM3-202ENST00000302206 SLC38A3Q99624 504 aa11.32□□□□□ -0.6
TPM3-202ENST00000302206 RBM4BQ9BQ04 359 aaKnown RBP11.32□□□□□ -0.6
TPM3-202ENST00000302206 ADI1Q9BV57 179 aa11.32□□□□□ -0.6
TPM3-202ENST00000302206 RBM4Q9BWF3 364 aaKnown RBP11.32□□□□□ -0.6
TPM3-202ENST00000302206 EPB41L1Q9H4G0 881 aa11.32□□□□□ -0.6
TPM3-202ENST00000302206 ZNF696Q9H7X3 374 aa11.32□□□□□ -0.6
TPM3-202ENST00000302206 CLK4Q9HAZ1 481 aaKnown RBP11.32□□□□□ -0.6
TPM3-202ENST00000302206 UBAP1Q9NZ09 502 aa11.32□□□□□ -0.6
TPM3-202ENST00000302206 NTMQ9P121 344 aa11.32□□□□□ -0.6
TPM3-202ENST00000302206 DAPP1Q9UN19 280 aa11.32□□□□□ -0.6
TPM3-202ENST00000302206 SNX11Q9Y5W9 270 aa11.32□□□□□ -0.6
TPM3-202ENST00000302206 AK5Q9Y6K8 562 aa11.32□□□□□ -0.6
TPM3-202ENST00000302206 SPACA6W5XKT8 324 aa11.32□□□□□ -0.6
TPM3-202ENST00000302206 EML5Q05BV3 1969 aa11.31□□□□□ -0.6
TPM3-202ENST00000302206 TMEM247A6NEH6 219 aa11.31□□□□□ -0.6
TPM3-202ENST00000302206 C5orf58C9J3I9 102 aa11.31□□□□□ -0.6
TPM3-202ENST00000302206 HMGN4O00479 90 aa11.31□□□□□ -0.6
TPM3-202ENST00000302206 GALR3O60755 368 aaPredicted RBP11.31□□□□□ -0.6
TPM3-202ENST00000302206 ERAL1O75616 437 aaKnown RBP11.31□□□□□ -0.6
TPM3-202ENST00000302206 SLITRK5O94991 958 aa11.31□□□□□ -0.6
TPM3-202ENST00000302206 TNFAIP8O95379 198 aa11.31□□□□□ -0.6
TPM3-202ENST00000302206 FHP07954 510 aa11.31□□□□□ -0.6
TPM3-202ENST00000302206 TFPTP0C1Z6 253 aa11.31□□□□□ -0.6
TPM3-202ENST00000302206 ST6GAL1P15907 406 aa11.31□□□□□ -0.6
TPM3-202ENST00000302206 ITGA2P17301 1181 aa11.31□□□□□ -0.6
TPM3-202ENST00000302206 TYRP1P17643 537 aa11.31□□□□□ -0.6
TPM3-202ENST00000302206 FPR1P21462 350 aa11.31□□□□□ -0.6
TPM3-202ENST00000302206 DNAJA1P31689 397 aaKnown RBP11.31□□□□□ -0.6
TPM3-202ENST00000302206 CAPGP40121 348 aa11.31□□□□□ -0.6
TPM3-202ENST00000302206 DCTP40126 519 aa11.31□□□□□ -0.6
TPM3-202ENST00000302206 CSNK1EP49674 416 aaKnown RBP11.31□□□□□ -0.6
TPM3-202ENST00000302206 SKP1P63208 163 aa11.31□□□□□ -0.6
TPM3-202ENST00000302206 ADARB1P78563 741 aaKnown RBP11.31□□□□□ -0.6
TPM3-202ENST00000302206 PRR5P85299 388 aa11.31□□□□□ -0.6
TPM3-202ENST00000302206 PPP2R2BQ00005 443 aa11.31□□□□□ -0.6
TPM3-202ENST00000302206 RUNX2Q13950 521 aa11.31□□□□□ -0.6
TPM3-202ENST00000302206 GNA13Q14344 377 aa11.31□□□□□ -0.6
TPM3-202ENST00000302206 PRTGQ2VWP7 1150 aa11.31□□□□□ -0.6
TPM3-202ENST00000302206 RFX4Q33E94 735 aa11.31□□□□□ -0.6
TPM3-202ENST00000302206 ZNF528Q3MIS6 628 aa11.31□□□□□ -0.6
TPM3-202ENST00000302206 DEFB134Q4QY38 66 aa11.31□□□□□ -0.6
TPM3-202ENST00000302206 TBPL2Q6SJ96 375 aa11.31□□□□□ -0.6
TPM3-202ENST00000302206 USP53Q70EK8 1073 aa11.31□□□□□ -0.6
TPM3-202ENST00000302206 STK32CQ86UX6 486 aa11.31□□□□□ -0.6
TPM3-202ENST00000302206 ZNF761Q86XN6 746 aaPredicted RBP11.31□□□□□ -0.6
TPM3-202ENST00000302206 ARMC8Q8IUR7 673 aa11.31□□□□□ -0.6
TPM3-202ENST00000302206 ST13P4Q8IZP2 240 aaPredicted RBP11.31□□□□□ -0.6
TPM3-202ENST00000302206 ARHGEF39Q8N4T4 335 aa11.31□□□□□ -0.6
TPM3-202ENST00000302206 OR4K14Q8NGD5 310 aa11.31□□□□□ -0.6
TPM3-202ENST00000302206 ZCCHC10Q8TBK6 192 aa11.31□□□□□ -0.6
TPM3-202ENST00000302206 MAGEE2Q8TD90 523 aaPredicted RBP11.31□□□□□ -0.6
TPM3-202ENST00000302206 TAMM41Q96BW9 452 aa11.31□□□□□ -0.6
TPM3-202ENST00000302206 ZNF285Q96NJ3 590 aa11.31□□□□□ -0.6
TPM3-202ENST00000302206 CCDC3Q9BQI4 270 aa11.31□□□□□ -0.6
TPM3-202ENST00000302206 C3orf14Q9HBI5 128 aa11.31□□□□□ -0.6
TPM3-202ENST00000302206 PRMT8Q9NR22 394 aaPredicted RBP11.31□□□□□ -0.6
TPM3-202ENST00000302206 ENAMQ9NRM1 1142 aa11.31□□□□□ -0.6
TPM3-202ENST00000302206 THSD1Q9NS62 852 aa11.31□□□□□ -0.6
TPM3-202ENST00000302206 PNPLA3Q9NST1 481 aa11.31□□□□□ -0.6
TPM3-202ENST00000302206 ZCCHC3Q9NUD5 404 aaKnown RBP11.31□□□□□ -0.6
TPM3-202ENST00000302206 FAM208BQ5VWN6 2430 aa11.3□□□□□ -0.6
TPM3-202ENST00000302206 TMEM131Q92545 1883 aa11.3□□□□□ -0.6
TPM3-202ENST00000302206 A0A1B0GTW7 788 aa11.3□□□□□ -0.6
TPM3-202ENST00000302206 BLACEA4D250 179 aa11.3□□□□□ -0.6
TPM3-202ENST00000302206 TLCD2A6NGC4 264 aa11.3□□□□□ -0.6
TPM3-202ENST00000302206 GLOD5A6NK44 160 aa11.3□□□□□ -0.6
TPM3-202ENST00000302206 M0QX08 132 aa11.3□□□□□ -0.6
TPM3-202ENST00000302206 PLOD2O00469 737 aa11.3□□□□□ -0.6
TPM3-202ENST00000302206 LAMTOR5O43504 91 aa11.3□□□□□ -0.6
TPM3-202ENST00000302206 ASNA1O43681 348 aa11.3□□□□□ -0.6
TPM3-202ENST00000302206 SH3BP5O60239 455 aa11.3□□□□□ -0.6
TPM3-202ENST00000302206 E2F6O75461 281 aa11.3□□□□□ -0.6
TPM3-202ENST00000302206 PRKRAO75569 313 aaKnown RBP11.3□□□□□ -0.6
TPM3-202ENST00000302206 SMNDC1O75940 238 aaKnown RBP eCLIP11.3□□□□□ -0.6
TPM3-202ENST00000302206 ALBP02768 609 aa11.3□□□□□ -0.6
TPM3-202ENST00000302206 THRBP10828 461 aa11.3□□□□□ -0.6
TPM3-202ENST00000302206 TDGF1P13385 188 aa11.3□□□□□ -0.6
TPM3-202ENST00000302206 MATN1P21941 496 aa11.3□□□□□ -0.6
TPM3-202ENST00000302206 CTSKP43235 329 aa11.3□□□□□ -0.6
TPM3-202ENST00000302206 ARHGDIAP52565 204 aa11.3□□□□□ -0.6
TPM3-202ENST00000302206 VSX2P58304 361 aaPredicted RBP11.3□□□□□ -0.6
TPM3-202ENST00000302206 PPP1CAP62136 330 aa11.3□□□□□ -0.6
TPM3-202ENST00000302206 VLDLRP98155 873 aa11.3□□□□□ -0.6
TPM3-202ENST00000302206 DMWDQ09019 674 aa11.3□□□□□ -0.6
TPM3-202ENST00000302206 TP53BP2Q13625 1128 aa11.3□□□□□ -0.6
TPM3-202ENST00000302206 C6orf132Q5T0Z8 1188 aa11.3□□□□□ -0.6
TPM3-202ENST00000302206 FAM180BQ6P0A1 224 aa11.3□□□□□ -0.6
TPM3-202ENST00000302206 USP51Q70EK9 711 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms