RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 CA5AP35218 305 aa14.25□□□□□ -0.13
SCN3B-201ENST00000299333 CAP1Q01518 475 aa14.25□□□□□ -0.13
SCN3B-201ENST00000299333 PPIGQ13427 754 aaKnown RBP eCLIP14.25□□□□□ -0.13
SCN3B-201ENST00000299333 SMYD5Q6GMV2 418 aa14.25□□□□□ -0.13
SCN3B-201ENST00000299333 ENPP6Q6UWR7 440 aa14.25□□□□□ -0.13
SCN3B-201ENST00000299333 ZSCAN4Q8NAM6 433 aaPredicted RBP14.25□□□□□ -0.13
SCN3B-201ENST00000299333 RIC1Q4ADV7 1423 aa14.25□□□□□ -0.13
SCN3B-201ENST00000299333 LOC102724200A0A096LPH7 203 aaPredicted RBP14.25□□□□□ -0.13
SCN3B-201ENST00000299333 SULT1C2O00338 296 aa14.25□□□□□ -0.13
SCN3B-201ENST00000299333 LRRTM2O43300 516 aa14.25□□□□□ -0.13
SCN3B-201ENST00000299333 GPAT4Q86UL3 456 aa14.25□□□□□ -0.13
SCN3B-201ENST00000299333 CILP2Q8IUL8 1156 aa14.25□□□□□ -0.13
SCN3B-201ENST00000299333 PROKR1Q8TCW9 393 aa14.25□□□□□ -0.13
SCN3B-201ENST00000299333 FKBP10Q96AY3 582 aa14.25□□□□□ -0.13
SCN3B-201ENST00000299333 CREBZFQ9NS37 354 aa14.25□□□□□ -0.13
SCN3B-201ENST00000299333 PIGVQ9NUD9 493 aa14.25□□□□□ -0.13
SCN3B-201ENST00000299333 MKS1Q9NXB0 559 aa14.25□□□□□ -0.13
SCN3B-201ENST00000299333 DCCP43146 1447 aa14.25□□□□□ -0.13
SCN3B-201ENST00000299333 SLC22A5O76082 557 aa14.25□□□□□ -0.13
SCN3B-201ENST00000299333 HCAR3P49019 387 aa14.25□□□□□ -0.13
SCN3B-201ENST00000299333 OR4D2P58180 307 aa14.25□□□□□ -0.13
SCN3B-201ENST00000299333 RPS24P62847 133 aaKnown RBP14.25□□□□□ -0.13
SCN3B-201ENST00000299333 PDGFRLQ15198 375 aa14.25□□□□□ -0.13
SCN3B-201ENST00000299333 RNASE10Q5GAN6 216 aaKnown RBP14.25□□□□□ -0.13
SCN3B-201ENST00000299333 GPR142Q7Z601 462 aa14.25□□□□□ -0.13
SCN3B-201ENST00000299333 C12orf45Q8N5I9 185 aaPredicted RBP14.25□□□□□ -0.13
SCN3B-201ENST00000299333 ZNF597Q96LX8 424 aa14.25□□□□□ -0.13
SCN3B-201ENST00000299333 SAMD11Q96NU1 681 aa14.25□□□□□ -0.13
SCN3B-201ENST00000299333 RNF208Q9H0X6 261 aa14.25□□□□□ -0.13
SCN3B-201ENST00000299333 UNC119BA6NIH7 251 aa14.25□□□□□ -0.13
SCN3B-201ENST00000299333 C11orf98E9PRG8 122 aa14.25□□□□□ -0.13
SCN3B-201ENST00000299333 ZNF821O75541 412 aaPredicted RBP14.25□□□□□ -0.13
SCN3B-201ENST00000299333 NFATC1O95644 943 aa14.25□□□□□ -0.13
SCN3B-201ENST00000299333 CD6P30203 668 aa14.25□□□□□ -0.13
SCN3B-201ENST00000299333 DLSTP36957 453 aa14.25□□□□□ -0.13
SCN3B-201ENST00000299333 ACTC1P68032 377 aa14.25□□□□□ -0.13
SCN3B-201ENST00000299333 ACTA1P68133 377 aa14.25□□□□□ -0.13
SCN3B-201ENST00000299333 FAM214AQ32MH5 1076 aa14.25□□□□□ -0.13
SCN3B-201ENST00000299333 OR51A7Q8NH64 312 aa14.25□□□□□ -0.13
SCN3B-201ENST00000299333 C7orf43Q8WVR3 580 aa14.25□□□□□ -0.13
SCN3B-201ENST00000299333 PCTPQ9UKL6 214 aa14.25□□□□□ -0.13
SCN3B-201ENST00000299333 PTGDR2Q9Y5Y4 395 aa14.25□□□□□ -0.13
SCN3B-201ENST00000299333 A0A096LPI6 279 aa14.24□□□□□ -0.13
SCN3B-201ENST00000299333 SOBPA7XYQ1 873 aa14.24□□□□□ -0.13
SCN3B-201ENST00000299333 WNT9AO14904 365 aa14.24□□□□□ -0.13
SCN3B-201ENST00000299333 FGF19O95750 216 aa14.24□□□□□ -0.13
SCN3B-201ENST00000299333 RAB6AP20340 208 aa14.24□□□□□ -0.13
SCN3B-201ENST00000299333 ZNF136P52737 540 aa14.24□□□□□ -0.13
SCN3B-201ENST00000299333 RAB30Q15771 203 aa14.24□□□□□ -0.13
SCN3B-201ENST00000299333 CORO6Q6QEF8 472 aa14.24□□□□□ -0.13
SCN3B-201ENST00000299333 NTAN1Q96AB6 310 aa14.24□□□□□ -0.13
SCN3B-201ENST00000299333 FAM124BQ9H5Z6 455 aaPredicted RBP14.24□□□□□ -0.13
SCN3B-201ENST00000299333 KLHL9Q9P2J3 617 aa14.24□□□□□ -0.13
SCN3B-201ENST00000299333 MITFO75030 526 aaPredicted RBP14.24□□□□□ -0.13
SCN3B-201ENST00000299333 CBSLP0DN79 551 aa14.24□□□□□ -0.13
SCN3B-201ENST00000299333 SSTR4P31391 388 aa14.24□□□□□ -0.13
SCN3B-201ENST00000299333 CBSP35520 551 aa14.24□□□□□ -0.13
SCN3B-201ENST00000299333 SLC25A11Q02978 314 aaKnown RBP14.24□□□□□ -0.13
SCN3B-201ENST00000299333 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.24□□□□□ -0.13
SCN3B-201ENST00000299333 C12orf40Q86WS4 652 aa14.24□□□□□ -0.13
SCN3B-201ENST00000299333 ZNF436Q9C0F3 470 aaPredicted RBP14.24□□□□□ -0.13
SCN3B-201ENST00000299333 RIPK3Q9Y572 518 aa14.24□□□□□ -0.13
SCN3B-201ENST00000299333 TNFSF12-TNFSF13A0A0A6YY99 330 aa14.24□□□□□ -0.13
SCN3B-201ENST00000299333 TNFSF12O43508 249 aa14.24□□□□□ -0.13
SCN3B-201ENST00000299333 OR12D1P0DN82 309 aa14.24□□□□□ -0.13
SCN3B-201ENST00000299333 GP1BBP13224 206 aa14.24□□□□□ -0.13
SCN3B-201ENST00000299333 AK4P27144 223 aaPredicted RBP14.24□□□□□ -0.13
SCN3B-201ENST00000299333 SSTR2P30874 369 aa14.24□□□□□ -0.13
SCN3B-201ENST00000299333 PPA1Q15181 289 aa14.24□□□□□ -0.13
SCN3B-201ENST00000299333 DECR1Q16698 335 aa14.24□□□□□ -0.13
SCN3B-201ENST00000299333 TLDC1Q6P9B6 456 aa14.24□□□□□ -0.13
SCN3B-201ENST00000299333 HCAR2Q8TDS4 363 aa14.24□□□□□ -0.13
SCN3B-201ENST00000299333 ZNF514Q96K75 400 aaPredicted RBP14.24□□□□□ -0.13
SCN3B-201ENST00000299333 NSUN5Q96P11 429 aaKnown RBP14.24□□□□□ -0.13
SCN3B-201ENST00000299333 VRK1Q99986 396 aaPredicted RBP14.24□□□□□ -0.13
SCN3B-201ENST00000299333 DPYSL5Q9BPU6 564 aa14.24□□□□□ -0.13
SCN3B-201ENST00000299333 DPH2Q9BQC3 489 aaPredicted RBP14.24□□□□□ -0.13
SCN3B-201ENST00000299333 NIFKQ9BYG3 293 aaKnown RBP14.24□□□□□ -0.13
SCN3B-201ENST00000299333 DUS2Q9NX74 493 aaKnown RBP14.24□□□□□ -0.13
SCN3B-201ENST00000299333 UBE2J1Q9Y385 318 aaPredicted RBP14.24□□□□□ -0.13
SCN3B-201ENST00000299333 IRAK2O43187 625 aa14.24□□□□□ -0.13
SCN3B-201ENST00000299333 TBX18O95935 607 aa14.24□□□□□ -0.13
SCN3B-201ENST00000299333 UQCRC2P22695 453 aa14.24□□□□□ -0.13
SCN3B-201ENST00000299333 BDKRB2P30411 391 aa14.24□□□□□ -0.13
SCN3B-201ENST00000299333 LEPRP48357 1165 aaKnown RBP14.24□□□□□ -0.13
SCN3B-201ENST00000299333 TMIGD1Q6UXZ0 262 aa14.24□□□□□ -0.13
SCN3B-201ENST00000299333 SLC29A4Q7RTT9 530 aa14.24□□□□□ -0.13
SCN3B-201ENST00000299333 KCTD20Q7Z5Y7 419 aa14.24□□□□□ -0.13
SCN3B-201ENST00000299333 PXKQ7Z7A4 578 aa14.24□□□□□ -0.13
SCN3B-201ENST00000299333 OR5H6Q8NGV6 325 aa14.24□□□□□ -0.13
SCN3B-201ENST00000299333 ST7LQ8TDW4 575 aa14.24□□□□□ -0.13
SCN3B-201ENST00000299333 RBP7Q96R05 134 aa14.24□□□□□ -0.13
SCN3B-201ENST00000299333 FAM83CQ9BQN1 747 aa14.24□□□□□ -0.13
SCN3B-201ENST00000299333 MROQ9BYG7 248 aa14.24□□□□□ -0.13
SCN3B-201ENST00000299333 KLRF1Q9NZS2 232 aa14.24□□□□□ -0.13
SCN3B-201ENST00000299333 TMEM181Q9P2C4 612 aa14.24□□□□□ -0.13
SCN3B-201ENST00000299333 GXYLT2A0PJZ3 443 aa14.24□□□□□ -0.13
SCN3B-201ENST00000299333 MMP3P08254 477 aa14.24□□□□□ -0.13
SCN3B-201ENST00000299333 SNRNP70P08621 437 aaKnown RBP14.24□□□□□ -0.13
SCN3B-201ENST00000299333 H2BFMP0C1H6 154 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms