RNA–Protein interactions for RNA: ENST00000297615.9

TTC39B-201, Transcript of tetratricopeptide repeat domain 39B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TTC39B, Length 3,053 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39B-201ENST00000297615 DEFB134Q4QY38 66 aa12.82□□□□□ -0.36
TTC39B-201ENST00000297615 KHDRBS2Q5VWX1 349 aaKnown RBP12.82□□□□□ -0.36
TTC39B-201ENST00000297615 NIPAL1Q6NVV3 410 aa12.82□□□□□ -0.36
TTC39B-201ENST00000297615 ANKRD54Q6NXT1 300 aa12.82□□□□□ -0.36
TTC39B-201ENST00000297615 METTL2BQ6P1Q9 378 aaKnown RBP12.82□□□□□ -0.36
TTC39B-201ENST00000297615 ZNF438Q7Z4V0 828 aa12.82□□□□□ -0.36
TTC39B-201ENST00000297615 NLRP8Q86W28 1048 aa12.82□□□□□ -0.36
TTC39B-201ENST00000297615 KRT78Q8N1N4 520 aa12.82□□□□□ -0.36
TTC39B-201ENST00000297615 SLC9A6Q92581 669 aa12.82□□□□□ -0.36
TTC39B-201ENST00000297615 SLC38A4Q969I6 547 aa12.82□□□□□ -0.36
TTC39B-201ENST00000297615 TP53INP1Q96A56 240 aa12.82□□□□□ -0.36
TTC39B-201ENST00000297615 TM4SF18Q96CE8 201 aa12.82□□□□□ -0.36
TTC39B-201ENST00000297615 HRASLS5Q96KN8 279 aa12.82□□□□□ -0.36
TTC39B-201ENST00000297615 CNDP2Q96KP4 475 aaKnown RBP12.82□□□□□ -0.36
TTC39B-201ENST00000297615 AIF1LQ9BQI0 150 aa12.82□□□□□ -0.36
TTC39B-201ENST00000297615 TCEAL2Q9H3H9 227 aaPredicted RBP12.82□□□□□ -0.36
TTC39B-201ENST00000297615 INIPQ9NRY2 104 aa12.82□□□□□ -0.36
TTC39B-201ENST00000297615 ERVK13-1Q9NX77 482 aa12.82□□□□□ -0.36
TTC39B-201ENST00000297615 GIN1Q9NXP7 522 aa12.82□□□□□ -0.36
TTC39B-201ENST00000297615 ZNF226Q9NYT6 803 aa12.82□□□□□ -0.36
TTC39B-201ENST00000297615 TBC1D29Q9UFV1 150 aa12.82□□□□□ -0.36
TTC39B-201ENST00000297615 KLHL3Q9UH77 587 aa12.82□□□□□ -0.36
TTC39B-201ENST00000297615 HELZP42694 1942 aaKnown RBP12.82□□□□□ -0.36
TTC39B-201ENST00000297615 LRRK1Q38SD2 2015 aa12.82□□□□□ -0.36
TTC39B-201ENST00000297615 CTDSP2O14595 271 aa12.82□□□□□ -0.36
TTC39B-201ENST00000297615 GNB5O14775 395 aa12.82□□□□□ -0.36
TTC39B-201ENST00000297615 CCNB2O95067 398 aa12.82□□□□□ -0.36
TTC39B-201ENST00000297615 EGFP01133 1207 aa12.82□□□□□ -0.36
TTC39B-201ENST00000297615 IFNW1P05000 195 aa12.82□□□□□ -0.36
TTC39B-201ENST00000297615 ADRA2AP08913 450 aa12.82□□□□□ -0.36
TTC39B-201ENST00000297615 HOXB2P14652 356 aa12.82□□□□□ -0.36
TTC39B-201ENST00000297615 SERPINB1P30740 379 aa12.82□□□□□ -0.36
TTC39B-201ENST00000297615 PCGF2P35227 344 aa12.82□□□□□ -0.36
TTC39B-201ENST00000297615 GGT2P36268 569 aa12.82□□□□□ -0.36
TTC39B-201ENST00000297615 AVPR1BP47901 424 aa12.82□□□□□ -0.36
TTC39B-201ENST00000297615 NNATQ16517 81 aa12.82□□□□□ -0.36
TTC39B-201ENST00000297615 ZNF404Q494X3 552 aa12.82□□□□□ -0.36
TTC39B-201ENST00000297615 IQCCQ4KMZ1 466 aa12.82□□□□□ -0.36
TTC39B-201ENST00000297615 FAHD1Q6P587 224 aa12.82□□□□□ -0.36
TTC39B-201ENST00000297615 PAQR6Q6TCH4 344 aa12.82□□□□□ -0.36
TTC39B-201ENST00000297615 DCUN1D3Q8IWE4 304 aa12.82□□□□□ -0.36
TTC39B-201ENST00000297615 DNAJC22Q8N4W6 341 aa12.82□□□□□ -0.36
TTC39B-201ENST00000297615 OR52E4Q8NGH9 312 aa12.82□□□□□ -0.36
TTC39B-201ENST00000297615 OR4D11Q8NGI4 311 aa12.82□□□□□ -0.36
TTC39B-201ENST00000297615 SLC17A9Q9BYT1 436 aa12.82□□□□□ -0.36
TTC39B-201ENST00000297615 SLIRPQ9GZT3 109 aaKnown RBP12.82□□□□□ -0.36
TTC39B-201ENST00000297615 NMNAT1Q9HAN9 279 aaPredicted RBP12.82□□□□□ -0.36
TTC39B-201ENST00000297615 TBCCD1Q9NVR7 557 aa12.82□□□□□ -0.36
TTC39B-201ENST00000297615 DKK3Q9UBP4 350 aa12.82□□□□□ -0.36
TTC39B-201ENST00000297615 SEC14L3Q9UDX4 400 aa12.82□□□□□ -0.36
TTC39B-201ENST00000297615 CLEC2DQ9UHP7 191 aa12.82□□□□□ -0.36
TTC39B-201ENST00000297615 MKLN1Q9UL63 735 aa12.82□□□□□ -0.36
TTC39B-201ENST00000297615 IGKV1-8A0A0C4DH67 115 aa12.82□□□□□ -0.36
TTC39B-201ENST00000297615 CLCA1A8K7I4 914 aa12.82□□□□□ -0.36
TTC39B-201ENST00000297615 HOXC11O43248 304 aaPredicted RBP12.82□□□□□ -0.36
TTC39B-201ENST00000297615 GPR37L1O60883 481 aa12.82□□□□□ -0.36
TTC39B-201ENST00000297615 RNGTTO60942 597 aaKnown RBP12.82□□□□□ -0.36
TTC39B-201ENST00000297615 CNOT3O75175 753 aaKnown RBP12.82□□□□□ -0.36
TTC39B-201ENST00000297615 SERPINB7O75635 380 aa12.82□□□□□ -0.36
TTC39B-201ENST00000297615 MAOBP27338 520 aa12.82□□□□□ -0.36
TTC39B-201ENST00000297615 S100A5P33763 92 aa12.82□□□□□ -0.36
TTC39B-201ENST00000297615 BCL6P41182 706 aa12.82□□□□□ -0.36
TTC39B-201ENST00000297615 LIM2P55344 173 aa12.82□□□□□ -0.36
TTC39B-201ENST00000297615 PPP1CAP62136 330 aa12.82□□□□□ -0.36
TTC39B-201ENST00000297615 TEAD4Q15561 434 aa12.82□□□□□ -0.36
TTC39B-201ENST00000297615 MICAQ29983 383 aa12.82□□□□□ -0.36
TTC39B-201ENST00000297615 TMEM196Q5HYL7 178 aa12.82□□□□□ -0.36
TTC39B-201ENST00000297615 CDKL4Q5MAI5 379 aa12.82□□□□□ -0.36
TTC39B-201ENST00000297615 C6orf132Q5T0Z8 1188 aa12.82□□□□□ -0.36
TTC39B-201ENST00000297615 PDZD3Q86UT5 571 aa12.82□□□□□ -0.36
TTC39B-201ENST00000297615 GALNT13Q8IUC8 556 aa12.82□□□□□ -0.36
TTC39B-201ENST00000297615 OR8H2Q8N162 312 aa12.82□□□□□ -0.36
TTC39B-201ENST00000297615 CHCHD4Q8N4Q1 142 aa12.82□□□□□ -0.36
TTC39B-201ENST00000297615 MYDGFQ969H8 173 aa12.82□□□□□ -0.36
TTC39B-201ENST00000297615 NACC2Q96BF6 587 aa12.82□□□□□ -0.36
TTC39B-201ENST00000297615 OTUB2Q96DC9 234 aa12.82□□□□□ -0.36
TTC39B-201ENST00000297615 CAMK1GQ96NX5 476 aa12.82□□□□□ -0.36
TTC39B-201ENST00000297615 MVB12BQ9H7P6 319 aa12.82□□□□□ -0.36
TTC39B-201ENST00000297615 CCNB1IP1Q9NPC3 277 aa12.82□□□□□ -0.36
TTC39B-201ENST00000297615 SLCO1B1Q9Y6L6 691 aa12.82□□□□□ -0.36
TTC39B-201ENST00000297615 RTTNQ86VV8 2226 aa12.81□□□□□ -0.36
TTC39B-201ENST00000297615 SLC35F4A4IF30 521 aa12.81□□□□□ -0.36
TTC39B-201ENST00000297615 PSMD11O00231 422 aa12.81□□□□□ -0.36
TTC39B-201ENST00000297615 PDPK1O15530 556 aa12.81□□□□□ -0.36
TTC39B-201ENST00000297615 CELA2BP08218 269 aaPredicted RBP12.81□□□□□ -0.36
TTC39B-201ENST00000297615 ADORA3P0DMS8 318 aa12.81□□□□□ -0.36
TTC39B-201ENST00000297615 JUNDP17535 347 aa12.81□□□□□ -0.36
TTC39B-201ENST00000297615 IL1RNP18510 177 aa12.81□□□□□ -0.36
TTC39B-201ENST00000297615 PRPH2P23942 346 aa12.81□□□□□ -0.36
TTC39B-201ENST00000297615 PTX3P26022 381 aaPredicted RBP12.81□□□□□ -0.36
TTC39B-201ENST00000297615 CD97P48960 835 aa12.81□□□□□ -0.36
TTC39B-201ENST00000297615 CCR8P51685 355 aa12.81□□□□□ -0.36
TTC39B-201ENST00000297615 PUM1Q14671 1186 aaKnown RBP eCLIP12.81□□□□□ -0.36
TTC39B-201ENST00000297615 FAM71E1Q6IPT2 247 aa12.81□□□□□ -0.36
TTC39B-201ENST00000297615 PRSS41Q7RTY9 318 aa12.81□□□□□ -0.36
TTC39B-201ENST00000297615 MFSD4AQ8N468 514 aa12.81□□□□□ -0.36
TTC39B-201ENST00000297615 Q8N9G6 341 aaPredicted RBP12.81□□□□□ -0.36
TTC39B-201ENST00000297615 ZBTB8BQ8NAP8 495 aaPredicted RBP12.81□□□□□ -0.36
TTC39B-201ENST00000297615 LCN9Q8WX39 176 aa12.81□□□□□ -0.36
TTC39B-201ENST00000297615 CLIP3Q96DZ5 547 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms