RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 NLGN4XQ8N0W4 816 aa12.84□□□□□ -0.35
HPS3-201ENST00000296051 IQCF1Q8N6M8 205 aa12.84□□□□□ -0.35
HPS3-201ENST00000296051 CHST14Q8NCH0 376 aa12.84□□□□□ -0.35
HPS3-201ENST00000296051 RNASE11Q8TAA1 199 aaKnown RBP12.84□□□□□ -0.35
HPS3-201ENST00000296051 GATAD2BQ8WXI9 593 aa12.84□□□□□ -0.35
HPS3-201ENST00000296051 DGAT2Q96PD7 388 aa12.84□□□□□ -0.35
HPS3-201ENST00000296051 SLC29A3Q9BZD2 475 aa12.84□□□□□ -0.35
HPS3-201ENST00000296051 KCNN2Q9H2S1 579 aa12.84□□□□□ -0.35
HPS3-201ENST00000296051 NANSQ9NR45 359 aa12.84□□□□□ -0.35
HPS3-201ENST00000296051 IKZF2Q9UKS7 526 aa12.84□□□□□ -0.35
HPS3-201ENST00000296051 RBM7Q9Y580 266 aaKnown RBP12.84□□□□□ -0.35
HPS3-201ENST00000296051 A0A1W2PQL4 384 aaPredicted RBP12.84□□□□□ -0.35
HPS3-201ENST00000296051 SOCS5O75159 536 aa12.84□□□□□ -0.35
HPS3-201ENST00000296051 HRH2P25021 359 aa12.84□□□□□ -0.35
HPS3-201ENST00000296051 TACR1P25103 407 aa12.84□□□□□ -0.35
HPS3-201ENST00000296051 PTX3P26022 381 aaPredicted RBP12.84□□□□□ -0.35
HPS3-201ENST00000296051 MAP2K3P46734 347 aa12.84□□□□□ -0.35
HPS3-201ENST00000296051 PNLIPRP1P54315 467 aa12.84□□□□□ -0.35
HPS3-201ENST00000296051 KIAA0319Q5VV43 1072 aa12.84□□□□□ -0.35
HPS3-201ENST00000296051 LINGO2Q7L985 606 aa12.84□□□□□ -0.35
HPS3-201ENST00000296051 P4HA3Q7Z4N8 544 aa12.84□□□□□ -0.35
HPS3-201ENST00000296051 NAGSQ8N159 534 aa12.84□□□□□ -0.35
HPS3-201ENST00000296051 MND1Q9BWT6 205 aa12.84□□□□□ -0.35
HPS3-201ENST00000296051 IL20RAQ9UHF4 553 aa12.84□□□□□ -0.35
HPS3-201ENST00000296051 DAPL1A0PJW8 107 aa12.84□□□□□ -0.35
HPS3-201ENST00000296051 RGRP47804 291 aa12.84□□□□□ -0.35
HPS3-201ENST00000296051 CLDN8P56748 225 aa12.84□□□□□ -0.35
HPS3-201ENST00000296051 VSX2P58304 361 aaPredicted RBP12.84□□□□□ -0.35
HPS3-201ENST00000296051 CNTN4Q8IWV2 1026 aa12.84□□□□□ -0.35
HPS3-201ENST00000296051 SEC14L4Q9UDX3 406 aa12.84□□□□□ -0.35
HPS3-201ENST00000296051 PGAP2Q9UHJ9 254 aa12.84□□□□□ -0.35
HPS3-201ENST00000296051 CNOT1A5YKK6 2376 aaKnown RBP12.84□□□□□ -0.35
HPS3-201ENST00000296051 CHST10O43529 356 aa12.83□□□□□ -0.35
HPS3-201ENST00000296051 C6P13671 934 aa12.83□□□□□ -0.35
HPS3-201ENST00000296051 C5AR1P21730 350 aa12.83□□□□□ -0.35
HPS3-201ENST00000296051 GSTM4Q03013 218 aa12.83□□□□□ -0.35
HPS3-201ENST00000296051 PROX2Q3B8N5 592 aa12.83□□□□□ -0.35
HPS3-201ENST00000296051 PNCKQ6P2M8 343 aa12.83□□□□□ -0.35
HPS3-201ENST00000296051 MAPKAP1Q9BPZ7 522 aa12.83□□□□□ -0.35
HPS3-201ENST00000296051 MROQ9BYG7 248 aa12.83□□□□□ -0.35
HPS3-201ENST00000296051 RACGAP1Q9H0H5 632 aa12.83□□□□□ -0.35
HPS3-201ENST00000296051 RNF167Q9H6Y7 350 aa12.83□□□□□ -0.35
HPS3-201ENST00000296051 CXXC1Q9P0U4 656 aaPredicted RBP12.83□□□□□ -0.35
HPS3-201ENST00000296051 A0A075B6Q4 140 aa12.83□□□□□ -0.36
HPS3-201ENST00000296051 LINC01553A4QN01 128 aa12.83□□□□□ -0.36
HPS3-201ENST00000296051 FAM86C2PA6NEL3 165 aa12.83□□□□□ -0.36
HPS3-201ENST00000296051 M0QZQ0 153 aa12.83□□□□□ -0.36
HPS3-201ENST00000296051 C8orf89P0DMQ9 161 aa12.83□□□□□ -0.36
HPS3-201ENST00000296051 RNF144AP50876 292 aaPredicted RBP12.83□□□□□ -0.36
HPS3-201ENST00000296051 RHAGQ02094 409 aa12.83□□□□□ -0.36
HPS3-201ENST00000296051 THAP3Q8WTV1 239 aaPredicted RBP12.83□□□□□ -0.36
HPS3-201ENST00000296051 RGMAQ96B86 450 aa12.83□□□□□ -0.36
HPS3-201ENST00000296051 HSPA12BQ96MM6 686 aa12.83□□□□□ -0.36
HPS3-201ENST00000296051 ENAMQ9NRM1 1142 aa12.83□□□□□ -0.36
HPS3-201ENST00000296051 EXTL2Q9UBQ6 330 aa12.83□□□□□ -0.36
HPS3-201ENST00000296051 PFDN2Q9UHV9 154 aa12.83□□□□□ -0.36
HPS3-201ENST00000296051 GPR52Q9Y2T5 361 aa12.83□□□□□ -0.36
HPS3-201ENST00000296051 IFT52Q9Y366 437 aa12.83□□□□□ -0.36
HPS3-201ENST00000296051 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.83□□□□□ -0.36
HPS3-201ENST00000296051 OR6C74A6NCV1 312 aa12.83□□□□□ -0.36
HPS3-201ENST00000296051 NUDT7P0C024 238 aa12.83□□□□□ -0.36
HPS3-201ENST00000296051 CDH11P55287 796 aa12.83□□□□□ -0.36
HPS3-201ENST00000296051 ZNF691Q5VV52 312 aa12.83□□□□□ -0.36
HPS3-201ENST00000296051 HSDL2Q6YN16 418 aa12.83□□□□□ -0.36
HPS3-201ENST00000296051 SLC29A4Q7RTT9 530 aa12.83□□□□□ -0.36
HPS3-201ENST00000296051 TMEFF1Q8IYR6 380 aa12.83□□□□□ -0.36
HPS3-201ENST00000296051 ZSCAN1Q8NBB4 408 aa12.83□□□□□ -0.36
HPS3-201ENST00000296051 SNX33Q8WV41 574 aa12.83□□□□□ -0.36
HPS3-201ENST00000296051 PPIL3Q9H2H8 161 aaKnown RBP12.83□□□□□ -0.36
HPS3-201ENST00000296051 KLHL31Q9H511 634 aa12.83□□□□□ -0.36
HPS3-201ENST00000296051 WBP1LQ9NX94 342 aa12.83□□□□□ -0.36
HPS3-201ENST00000296051 STOML2Q9UJZ1 356 aa12.83□□□□□ -0.36
HPS3-201ENST00000296051 ZFR2Q9UPR6 939 aaKnown RBP12.83□□□□□ -0.36
HPS3-201ENST00000296051 A0A1B0GTL3 188 aa12.83□□□□□ -0.36
HPS3-201ENST00000296051 SEC14L2O76054 403 aa12.83□□□□□ -0.36
HPS3-201ENST00000296051 UQCRC1P31930 480 aa12.83□□□□□ -0.36
HPS3-201ENST00000296051 ELOAQ14241 798 aaKnown RBP12.83□□□□□ -0.36
HPS3-201ENST00000296051 GPR68Q15743 365 aa12.83□□□□□ -0.36
HPS3-201ENST00000296051 AGAP6Q5VW22 663 aa12.83□□□□□ -0.36
HPS3-201ENST00000296051 MDGA1Q8NFP4 955 aa12.83□□□□□ -0.36
HPS3-201ENST00000296051 SNAPC3Q92966 411 aa12.83□□□□□ -0.36
HPS3-201ENST00000296051 MUL1Q969V5 352 aa12.83□□□□□ -0.36
HPS3-201ENST00000296051 SLC35G5Q96KT7 338 aa12.83□□□□□ -0.36
HPS3-201ENST00000296051 AGAP4Q96P64 663 aa12.83□□□□□ -0.36
HPS3-201ENST00000296051 KLRF1Q9NZS2 232 aa12.83□□□□□ -0.36
HPS3-201ENST00000296051 EVPLQ92817 2033 aa12.82□□□□□ -0.36
HPS3-201ENST00000296051 RTCAO00442 366 aaKnown RBP12.82□□□□□ -0.36
HPS3-201ENST00000296051 PRLP01236 227 aa12.82□□□□□ -0.36
HPS3-201ENST00000296051 LNX2Q8N448 690 aa12.82□□□□□ -0.36
HPS3-201ENST00000296051 TOMM5Q8N4H5 51 aa12.82□□□□□ -0.36
HPS3-201ENST00000296051 SAMD12Q8N8I0 201 aa12.82□□□□□ -0.36
HPS3-201ENST00000296051 PIGXQ8TBF5 258 aa12.82□□□□□ -0.36
HPS3-201ENST00000296051 MYLIPQ8WY64 445 aa12.82□□□□□ -0.36
HPS3-201ENST00000296051 SLC25A36Q96CQ1 311 aa12.82□□□□□ -0.36
HPS3-201ENST00000296051 RHNO1Q9BSD3 238 aa12.82□□□□□ -0.36
HPS3-201ENST00000296051 BCL2L14Q9BZR8 327 aa12.82□□□□□ -0.36
HPS3-201ENST00000296051 AMBRA1Q9C0C7 1298 aa12.82□□□□□ -0.36
HPS3-201ENST00000296051 COMMD9Q9P000 198 aa12.82□□□□□ -0.36
HPS3-201ENST00000296051 ACSL5Q9ULC5 683 aa12.82□□□□□ -0.36
HPS3-201ENST00000296051 RIF1Q5UIP0 2472 aaKnown RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms