RNA–Protein interactions for RNA: ENST00000287546.8

VPS8-201, Transcript of VPS8, CORVET complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS8, Length 5,047 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-201ENST00000287546 PREBQ9HCU5 417 aa6.61□□□□□ -1.35
VPS8-201ENST00000287546 TNFRSF12AQ9NP84 129 aa6.61□□□□□ -1.35
VPS8-201ENST00000287546 VAPAQ9P0L0 249 aa6.61□□□□□ -1.35
VPS8-201ENST00000287546 SEC14L3Q9UDX4 400 aa6.61□□□□□ -1.35
VPS8-201ENST00000287546 MAN2B2Q9Y2E5 1009 aa6.61□□□□□ -1.35
VPS8-201ENST00000287546 PDLIM1O00151 329 aa6.61□□□□□ -1.35
VPS8-201ENST00000287546 GREM1O60565 184 aa6.61□□□□□ -1.35
VPS8-201ENST00000287546 PFDN1O60925 122 aa6.61□□□□□ -1.35
VPS8-201ENST00000287546 RNGTTO60942 597 aaKnown RBP6.61□□□□□ -1.35
VPS8-201ENST00000287546 AGR2O95994 175 aa6.61□□□□□ -1.35
VPS8-201ENST00000287546 DRD1P21728 446 aa6.61□□□□□ -1.35
VPS8-201ENST00000287546 OMPP47874 163 aa6.61□□□□□ -1.35
VPS8-201ENST00000287546 ZNF41P51814 821 aaPredicted RBP6.61□□□□□ -1.35
VPS8-201ENST00000287546 UGT2B15P54855 530 aa6.61□□□□□ -1.35
VPS8-201ENST00000287546 CDK3Q00526 305 aa6.61□□□□□ -1.35
VPS8-201ENST00000287546 BNIP3Q12983 259 aa6.61□□□□□ -1.35
VPS8-201ENST00000287546 SHHQ15465 462 aa6.61□□□□□ -1.35
VPS8-201ENST00000287546 TIMM50Q3ZCQ8 353 aa6.61□□□□□ -1.35
VPS8-201ENST00000287546 CPZQ66K79 652 aa6.61□□□□□ -1.35
VPS8-201ENST00000287546 KCTD18Q6PI47 426 aaPredicted RBP6.61□□□□□ -1.35
VPS8-201ENST00000287546 CROCCP3Q8IVE0 287 aa6.61□□□□□ -1.35
VPS8-201ENST00000287546 KBTBD2Q8IY47 623 aa6.61□□□□□ -1.35
VPS8-201ENST00000287546 CADM2Q8N3J6 435 aa6.61□□□□□ -1.35
VPS8-201ENST00000287546 LINC00471Q8N535 108 aa6.61□□□□□ -1.35
VPS8-201ENST00000287546 DTWD1Q8N5C7 304 aa6.61□□□□□ -1.35
VPS8-201ENST00000287546 TMEM102Q8N9M5 508 aaPredicted RBP6.61□□□□□ -1.35
VPS8-201ENST00000287546 BOLLQ8N9W6 283 aaKnown RBP6.61□□□□□ -1.35
VPS8-201ENST00000287546 NAXEQ8NCW5 288 aa6.61□□□□□ -1.35
VPS8-201ENST00000287546 OR8J2Q8NGG1 315 aa6.61□□□□□ -1.35
VPS8-201ENST00000287546 NDNFQ8TB73 568 aa6.61□□□□□ -1.35
VPS8-201ENST00000287546 ZCCHC10Q8TBK6 192 aa6.61□□□□□ -1.35
VPS8-201ENST00000287546 ZNF480Q8WV37 535 aa6.61□□□□□ -1.35
VPS8-201ENST00000287546 JPH3Q8WXH2 748 aaPredicted RBP6.61□□□□□ -1.35
VPS8-201ENST00000287546 NANOS1Q8WY41 292 aaKnown RBP6.61□□□□□ -1.35
VPS8-201ENST00000287546 NAT6Q93015 286 aa6.61□□□□□ -1.35
VPS8-201ENST00000287546 SLC35G5Q96KT7 338 aa6.61□□□□□ -1.35
VPS8-201ENST00000287546 COQ10AQ96MF6 247 aa6.61□□□□□ -1.35
VPS8-201ENST00000287546 OR51B5Q9H339 312 aa6.61□□□□□ -1.35
VPS8-201ENST00000287546 RPF2Q9H7B2 306 aaKnown RBP6.61□□□□□ -1.35
VPS8-201ENST00000287546 MYNNQ9NPC7 610 aa6.61□□□□□ -1.35
VPS8-201ENST00000287546 THSD1Q9NS62 852 aa6.61□□□□□ -1.35
VPS8-201ENST00000287546 DLGAP4Q9Y2H0 992 aa6.61□□□□□ -1.35
VPS8-201ENST00000287546 PCDHGA8Q9Y5G5 932 aa6.61□□□□□ -1.35
VPS8-201ENST00000287546 CNTRLQ7Z7A1 2325 aa6.61□□□□□ -1.35
VPS8-201ENST00000287546 FNDC1Q4ZHG4 1894 aaPredicted RBP6.61□□□□□ -1.35
VPS8-201ENST00000287546 A0A1W2PQU0 124 aa6.6□□□□□ -1.35
VPS8-201ENST00000287546 MKRN2OSH3BPM6 223 aa6.6□□□□□ -1.35
VPS8-201ENST00000287546 DNAJB5O75953 348 aa6.6□□□□□ -1.35
VPS8-201ENST00000287546 KLF8O95600 359 aaPredicted RBP6.6□□□□□ -1.35
VPS8-201ENST00000287546 C9P02748 559 aa6.6□□□□□ -1.35
VPS8-201ENST00000287546 DRD2P14416 443 aa6.6□□□□□ -1.35
VPS8-201ENST00000287546 MYF6P23409 242 aa6.6□□□□□ -1.35
VPS8-201ENST00000287546 IMPA1P29218 277 aa6.6□□□□□ -1.35
VPS8-201ENST00000287546 SLC6A11P48066 632 aa6.6□□□□□ -1.35
VPS8-201ENST00000287546 LGALS4P56470 323 aa6.6□□□□□ -1.35
VPS8-201ENST00000287546 CDK6Q00534 326 aa6.6□□□□□ -1.35
VPS8-201ENST00000287546 NFE2L1Q14494 772 aa6.6□□□□□ -1.35
VPS8-201ENST00000287546 CLCA4Q14CN2 919 aa6.6□□□□□ -1.35
VPS8-201ENST00000287546 FAM180BQ6P0A1 224 aa6.6□□□□□ -1.35
VPS8-201ENST00000287546 FAM3CQ92520 227 aa6.6□□□□□ -1.35
VPS8-201ENST00000287546 NR4A3Q92570 626 aa6.6□□□□□ -1.35
VPS8-201ENST00000287546 EXOSC8Q96B26 276 aaKnown RBP6.6□□□□□ -1.35
VPS8-201ENST00000287546 CPNE2Q96FN4 548 aaPredicted RBP6.6□□□□□ -1.35
VPS8-201ENST00000287546 HS6ST2Q96MM7 605 aa6.6□□□□□ -1.35
VPS8-201ENST00000287546 WDR92Q96MX6 357 aa6.6□□□□□ -1.35
VPS8-201ENST00000287546 NPLQ9BXD5 320 aaPredicted RBP6.6□□□□□ -1.35
VPS8-201ENST00000287546 SLC17A9Q9BYT1 436 aa6.6□□□□□ -1.35
VPS8-201ENST00000287546 PFDN2Q9UHV9 154 aa6.6□□□□□ -1.35
VPS8-201ENST00000287546 IKZF2Q9UKS7 526 aa6.6□□□□□ -1.35
VPS8-201ENST00000287546 MAP4K5Q9Y4K4 846 aa6.6□□□□□ -1.35
VPS8-201ENST00000287546 TRIM64CA6NLI5 447 aa6.6□□□□□ -1.35
VPS8-201ENST00000287546 TEX46H3BTG2 121 aa6.6□□□□□ -1.35
VPS8-201ENST00000287546 NDUFS4O43181 175 aa6.6□□□□□ -1.35
VPS8-201ENST00000287546 ANGPTL1O95841 491 aa6.6□□□□□ -1.35
VPS8-201ENST00000287546 PAK4O96013 591 aaPredicted RBP6.6□□□□□ -1.35
VPS8-201ENST00000287546 IFNA6P05013 189 aa6.6□□□□□ -1.35
VPS8-201ENST00000287546 S100A7P31151 101 aa6.6□□□□□ -1.35
VPS8-201ENST00000287546 SLC6A9P48067 706 aa6.6□□□□□ -1.35
VPS8-201ENST00000287546 EPHA4P54764 986 aa6.6□□□□□ -1.35
VPS8-201ENST00000287546 SIM1P81133 766 aaPredicted RBP6.6□□□□□ -1.35
VPS8-201ENST00000287546 TIAL1Q01085 375 aaKnown RBP eCLIP6.6□□□□□ -1.35
VPS8-201ENST00000287546 LARS2Q15031 903 aaKnown RBP6.6□□□□□ -1.35
VPS8-201ENST00000287546 PON2Q15165 354 aa6.6□□□□□ -1.35
VPS8-201ENST00000287546 GXYLT1Q4G148 440 aa6.6□□□□□ -1.35
VPS8-201ENST00000287546 SPANXN2Q5MJ10 180 aa6.6□□□□□ -1.35
VPS8-201ENST00000287546 SYCE2Q6PIF2 218 aa6.6□□□□□ -1.35
VPS8-201ENST00000287546 SUSD1Q6UWL2 747 aa6.6□□□□□ -1.35
VPS8-201ENST00000287546 RFLNAQ6ZTI6 216 aa6.6□□□□□ -1.35
VPS8-201ENST00000287546 COMMD6Q7Z4G1 85 aa6.6□□□□□ -1.35
VPS8-201ENST00000287546 ZSWIM9Q86XI8 627 aa6.6□□□□□ -1.35
VPS8-201ENST00000287546 ZNF808Q8N4W9 903 aaPredicted RBP6.6□□□□□ -1.35
VPS8-201ENST00000287546 C2orf73Q8N5S3 287 aaPredicted RBP6.6□□□□□ -1.35
VPS8-201ENST00000287546 BPIFB6Q8NFQ5 453 aa6.6□□□□□ -1.35
VPS8-201ENST00000287546 THRSPQ92748 146 aa6.6□□□□□ -1.35
VPS8-201ENST00000287546 ELSPBP1Q96BH3 223 aa6.6□□□□□ -1.35
VPS8-201ENST00000287546 MRPL38Q96DV4 380 aaKnown RBP6.6□□□□□ -1.35
VPS8-201ENST00000287546 LINC00615Q96LM1 132 aaPredicted RBP6.6□□□□□ -1.35
VPS8-201ENST00000287546 RAB9BQ9NP90 201 aa6.6□□□□□ -1.35
VPS8-201ENST00000287546 PRSS16Q9NQE7 514 aa6.6□□□□□ -1.35
VPS8-201ENST00000287546 DMRT3Q9NQL9 472 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms