RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 PLEKHS1Q5SXH7 462 aa12.75□□□□□ -0.37
SCAF4-201ENST00000286835 CNIH2Q6PI25 160 aa12.75□□□□□ -0.37
SCAF4-201ENST00000286835 GDPD4Q6W3E5 623 aa12.75□□□□□ -0.37
SCAF4-201ENST00000286835 C16orf62Q7Z3J2 963 aa12.75□□□□□ -0.37
SCAF4-201ENST00000286835 KRT78Q8N1N4 520 aa12.75□□□□□ -0.37
SCAF4-201ENST00000286835 C16orf78Q8WTQ4 265 aa12.75□□□□□ -0.37
SCAF4-201ENST00000286835 UBTD2Q8WUN7 234 aa12.75□□□□□ -0.37
SCAF4-201ENST00000286835 TRMT61BQ9BVS5 477 aaKnown RBP12.75□□□□□ -0.37
SCAF4-201ENST00000286835 GABARAPL3Q9BY60 117 aa12.75□□□□□ -0.37
SCAF4-201ENST00000286835 TTTY10Q9BZA0 68 aa12.75□□□□□ -0.37
SCAF4-201ENST00000286835 CLEC4MQ9H2X3 399 aaPredicted RBP12.75□□□□□ -0.37
SCAF4-201ENST00000286835 ACER3Q9NUN7 267 aa12.75□□□□□ -0.37
SCAF4-201ENST00000286835 ING4Q9UNL4 249 aa12.75□□□□□ -0.37
SCAF4-201ENST00000286835 I3L521 148 aa12.75□□□□□ -0.37
SCAF4-201ENST00000286835 PDPK1O15530 556 aa12.75□□□□□ -0.37
SCAF4-201ENST00000286835 CD22P20273 847 aa12.75□□□□□ -0.37
SCAF4-201ENST00000286835 CPN2P22792 545 aa12.75□□□□□ -0.37
SCAF4-201ENST00000286835 TEAD2Q15562 447 aa12.75□□□□□ -0.37
SCAF4-201ENST00000286835 ZNF791Q3KP31 576 aaPredicted RBP12.75□□□□□ -0.37
SCAF4-201ENST00000286835 PRR23CQ6ZRP0 262 aa12.75□□□□□ -0.37
SCAF4-201ENST00000286835 PDZD3Q86UT5 571 aa12.75□□□□□ -0.37
SCAF4-201ENST00000286835 SLC43A3Q8NBI5 491 aa12.75□□□□□ -0.37
SCAF4-201ENST00000286835 RAD9AQ99638 391 aa12.75□□□□□ -0.37
SCAF4-201ENST00000286835 BTNL2Q9UIR0 455 aa12.75□□□□□ -0.37
SCAF4-201ENST00000286835 PTPRZ1P23471 2315 aaPredicted RBP12.74□□□□□ -0.37
SCAF4-201ENST00000286835 SH3D21A4FU49 640 aa12.74□□□□□ -0.37
SCAF4-201ENST00000286835 ACADMP11310 421 aa12.74□□□□□ -0.37
SCAF4-201ENST00000286835 SRCP12931 536 aa12.74□□□□□ -0.37
SCAF4-201ENST00000286835 CXCR2P25025 360 aa12.74□□□□□ -0.37
SCAF4-201ENST00000286835 SSR2P43308 183 aa12.74□□□□□ -0.37
SCAF4-201ENST00000286835 SLC9A3P48764 834 aa12.74□□□□□ -0.37
SCAF4-201ENST00000286835 RNF144AP50876 292 aaPredicted RBP12.74□□□□□ -0.37
SCAF4-201ENST00000286835 BNC1Q01954 994 aa12.74□□□□□ -0.37
SCAF4-201ENST00000286835 SGCGQ13326 291 aa12.74□□□□□ -0.37
SCAF4-201ENST00000286835 OR6C4Q8NGE1 309 aa12.74□□□□□ -0.37
SCAF4-201ENST00000286835 OR5D16Q8NGK9 328 aa12.74□□□□□ -0.37
SCAF4-201ENST00000286835 NEIL3Q8TAT5 605 aa12.74□□□□□ -0.37
SCAF4-201ENST00000286835 SLC7A6Q92536 515 aa12.74□□□□□ -0.37
SCAF4-201ENST00000286835 PIGKQ92643 395 aa12.74□□□□□ -0.37
SCAF4-201ENST00000286835 OPALINQ96PE5 141 aa12.74□□□□□ -0.37
SCAF4-201ENST00000286835 SLC6A16Q9GZN6 736 aa12.74□□□□□ -0.37
SCAF4-201ENST00000286835 ZNF224Q9NZL3 707 aa12.74□□□□□ -0.37
SCAF4-201ENST00000286835 TOXO94900 526 aa12.74□□□□□ -0.37
SCAF4-201ENST00000286835 RAB36O95755 333 aa12.74□□□□□ -0.37
SCAF4-201ENST00000286835 C8orf89P0DMQ9 161 aa12.74□□□□□ -0.37
SCAF4-201ENST00000286835 PTPN6P29350 595 aa12.74□□□□□ -0.37
SCAF4-201ENST00000286835 B4GALNT1Q00973 533 aa12.74□□□□□ -0.37
SCAF4-201ENST00000286835 TMEM115Q12893 351 aaPredicted RBP12.74□□□□□ -0.37
SCAF4-201ENST00000286835 E2F2Q14209 437 aa12.74□□□□□ -0.37
SCAF4-201ENST00000286835 CCDC190Q86UF4 302 aa12.74□□□□□ -0.37
SCAF4-201ENST00000286835 RASSF5Q8WWW0 418 aa12.74□□□□□ -0.37
SCAF4-201ENST00000286835 CASD1Q96PB1 797 aa12.74□□□□□ -0.37
SCAF4-201ENST00000286835 F2RL3Q96RI0 385 aa12.74□□□□□ -0.37
SCAF4-201ENST00000286835 PRR14Q9BWN1 585 aa12.74□□□□□ -0.37
SCAF4-201ENST00000286835 TTLL2Q9BWV7 592 aa12.74□□□□□ -0.37
SCAF4-201ENST00000286835 ITM2BQ9Y287 266 aa12.74□□□□□ -0.37
SCAF4-201ENST00000286835 PAPPA2Q9BXP8 1791 aa12.74□□□□□ -0.37
SCAF4-201ENST00000286835 HNRNPCL2B2RXH8 293 aa12.74□□□□□ -0.37
SCAF4-201ENST00000286835 H3BQ06 376 aaPredicted RBP12.74□□□□□ -0.37
SCAF4-201ENST00000286835 CRYZL1O95825 349 aa12.74□□□□□ -0.37
SCAF4-201ENST00000286835 ADH1CP00326 375 aa12.74□□□□□ -0.37
SCAF4-201ENST00000286835 EPHX1P07099 455 aa12.74□□□□□ -0.37
SCAF4-201ENST00000286835 MAB21L1Q13394 359 aa12.74□□□□□ -0.37
SCAF4-201ENST00000286835 SSX1Q16384 188 aa12.74□□□□□ -0.37
SCAF4-201ENST00000286835 C17orf64Q86WR6 236 aa12.74□□□□□ -0.37
SCAF4-201ENST00000286835 KIAA1958Q8N8K9 716 aa12.74□□□□□ -0.37
SCAF4-201ENST00000286835 OR52P1PQ8NH57 321 aa12.74□□□□□ -0.37
SCAF4-201ENST00000286835 KLF16Q9BXK1 252 aaPredicted RBP12.74□□□□□ -0.37
SCAF4-201ENST00000286835 TBC1D24Q9ULP9 559 aa12.74□□□□□ -0.37
SCAF4-201ENST00000286835 TRIOBPQ9H2D6 2365 aa12.74□□□□□ -0.37
SCAF4-201ENST00000286835 GAPDHSO14556 408 aaPredicted RBP12.73□□□□□ -0.37
SCAF4-201ENST00000286835 GRM6O15303 877 aa12.73□□□□□ -0.37
SCAF4-201ENST00000286835 CAPN5O15484 640 aaPredicted RBP12.73□□□□□ -0.37
SCAF4-201ENST00000286835 AKR7A2O43488 359 aa12.73□□□□□ -0.37
SCAF4-201ENST00000286835 DCDC1P59894 354 aa12.73□□□□□ -0.37
SCAF4-201ENST00000286835 RPS25P62851 125 aaKnown RBP12.73□□□□□ -0.37
SCAF4-201ENST00000286835 RBBP4Q09028 425 aa12.73□□□□□ -0.37
SCAF4-201ENST00000286835 MBTPS1Q14703 1052 aa12.73□□□□□ -0.37
SCAF4-201ENST00000286835 GRHL2Q6ISB3 625 aa12.73□□□□□ -0.37
SCAF4-201ENST00000286835 HSD11B1LQ7Z5J1 315 aa12.73□□□□□ -0.37
SCAF4-201ENST00000286835 OR4K5Q8NGD3 323 aa12.73□□□□□ -0.37
SCAF4-201ENST00000286835 TDP1Q9NUW8 608 aa12.73□□□□□ -0.37
SCAF4-201ENST00000286835 TXNL4BQ9NX01 149 aaKnown RBP12.73□□□□□ -0.37
SCAF4-201ENST00000286835 MGAT4BQ9UQ53 548 aa12.73□□□□□ -0.37
SCAF4-201ENST00000286835 PCDHGB2Q9Y5G2 931 aa12.73□□□□□ -0.37
SCAF4-201ENST00000286835 CPSF4LA6NMK7 179 aaKnown RBP12.73□□□□□ -0.37
SCAF4-201ENST00000286835 OR1F1O43749 312 aa12.73□□□□□ -0.37
SCAF4-201ENST00000286835 CDH11P55287 796 aa12.73□□□□□ -0.37
SCAF4-201ENST00000286835 NTHL1P78549 312 aa12.73□□□□□ -0.37
SCAF4-201ENST00000286835 LASP1Q14847 261 aaKnown RBP12.73□□□□□ -0.37
SCAF4-201ENST00000286835 C9orf64Q5T6V5 341 aa12.73□□□□□ -0.37
SCAF4-201ENST00000286835 LHX8Q68G74 356 aa12.73□□□□□ -0.37
SCAF4-201ENST00000286835 C6orf120Q7Z4R8 191 aa12.73□□□□□ -0.37
SCAF4-201ENST00000286835 CCDC28AQ8IWP9 274 aa12.73□□□□□ -0.37
SCAF4-201ENST00000286835 ZNF557Q8N988 423 aaPredicted RBP12.73□□□□□ -0.37
SCAF4-201ENST00000286835 LRRC20Q8TCA0 184 aa12.73□□□□□ -0.37
SCAF4-201ENST00000286835 PLCXD1Q9NUJ7 323 aa12.73□□□□□ -0.37
SCAF4-201ENST00000286835 MARCH5Q9NX47 278 aa12.73□□□□□ -0.37
SCAF4-201ENST00000286835 EXTL2Q9UBQ6 330 aa12.73□□□□□ -0.37
SCAF4-201ENST00000286835 TAC3Q9UHF0 121 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms