RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 PCDHGA3Q9Y5H0 932 aa17.76■□□□□ 0.43
PDLIM3-202ENST00000284770 JRKO75564 520 aa17.76■□□□□ 0.43
PDLIM3-202ENST00000284770 ABCB1P08183 1280 aaPredicted RBP17.76■□□□□ 0.43
PDLIM3-202ENST00000284770 CPMP14384 443 aa17.76■□□□□ 0.43
PDLIM3-202ENST00000284770 PORP16435 677 aaPredicted RBP17.76■□□□□ 0.43
PDLIM3-202ENST00000284770 AGXTP21549 392 aa17.76■□□□□ 0.43
PDLIM3-202ENST00000284770 MSX2P35548 267 aaPredicted RBP17.76■□□□□ 0.43
PDLIM3-202ENST00000284770 MS4A2Q01362 244 aa17.76■□□□□ 0.43
PDLIM3-202ENST00000284770 DUSP2Q05923 314 aa17.76■□□□□ 0.43
PDLIM3-202ENST00000284770 HSPB3Q12988 150 aa17.76■□□□□ 0.43
PDLIM3-202ENST00000284770 SLC13A2Q13183 592 aa17.76■□□□□ 0.43
PDLIM3-202ENST00000284770 KIF26BQ2KJY2 2108 aa17.76■□□□□ 0.43
PDLIM3-202ENST00000284770 SPATS1Q496A3 300 aa17.76■□□□□ 0.43
PDLIM3-202ENST00000284770 GTDC1Q4AE62 458 aa17.76■□□□□ 0.43
PDLIM3-202ENST00000284770 C6orf163Q5TEZ5 329 aa17.76■□□□□ 0.43
PDLIM3-202ENST00000284770 LRRC25Q8N386 305 aaPredicted RBP17.76■□□□□ 0.43
PDLIM3-202ENST00000284770 PSMA8Q8TAA3 256 aa17.76■□□□□ 0.43
PDLIM3-202ENST00000284770 DPH2Q9BQC3 489 aaPredicted RBP17.76■□□□□ 0.43
PDLIM3-202ENST00000284770 GMPR2Q9P2T1 348 aaKnown RBP17.76■□□□□ 0.43
PDLIM3-202ENST00000284770 VPS4AQ9UN37 437 aa17.76■□□□□ 0.43
PDLIM3-202ENST00000284770 SATB2Q9UPW6 733 aa17.76■□□□□ 0.43
PDLIM3-202ENST00000284770 IGLV3-12A0A075B6K2 115 aa17.75■□□□□ 0.43
PDLIM3-202ENST00000284770 ACOT8O14734 319 aa17.75■□□□□ 0.43
PDLIM3-202ENST00000284770 KLK3P07288 261 aaPredicted RBP17.75■□□□□ 0.43
PDLIM3-202ENST00000284770 HSD17B1P14061 328 aa17.75■□□□□ 0.43
PDLIM3-202ENST00000284770 BTG2P78543 158 aa17.75■□□□□ 0.43
PDLIM3-202ENST00000284770 ID2Q02363 134 aa17.75■□□□□ 0.43
PDLIM3-202ENST00000284770 SELPLGQ14242 412 aa17.75■□□□□ 0.43
PDLIM3-202ENST00000284770 RUNDC3AQ59EK9 446 aa17.75■□□□□ 0.43
PDLIM3-202ENST00000284770 VWA2Q5GFL6 755 aa17.75■□□□□ 0.43
PDLIM3-202ENST00000284770 C3orf38Q5JPI3 329 aa17.75■□□□□ 0.43
PDLIM3-202ENST00000284770 ZC3H7AQ8IWR0 971 aaKnown RBP17.75■□□□□ 0.43
PDLIM3-202ENST00000284770 TRIML2Q8N7C3 387 aa17.75■□□□□ 0.43
PDLIM3-202ENST00000284770 ADAMTS14Q8WXS8 1223 aa17.75■□□□□ 0.43
PDLIM3-202ENST00000284770 TRIM4Q9C037 500 aa17.75■□□□□ 0.43
PDLIM3-202ENST00000284770 CTSFQ9UBX1 484 aa17.75■□□□□ 0.43
PDLIM3-202ENST00000284770 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.75■□□□□ 0.43
PDLIM3-202ENST00000284770 MMACHCQ9Y4U1 282 aa17.75■□□□□ 0.43
PDLIM3-202ENST00000284770 NVLO15381 856 aaKnown RBP17.74■□□□□ 0.43
PDLIM3-202ENST00000284770 ATP6V1G2O95670 118 aa17.74■□□□□ 0.43
PDLIM3-202ENST00000284770 TCN1P20061 433 aaPredicted RBP17.74■□□□□ 0.43
PDLIM3-202ENST00000284770 MTPNP58546 118 aa17.74■□□□□ 0.43
PDLIM3-202ENST00000284770 IGLV3-21P80748 117 aaPredicted RBP17.74■□□□□ 0.43
PDLIM3-202ENST00000284770 STX4Q12846 297 aa17.74■□□□□ 0.43
PDLIM3-202ENST00000284770 TRIM25Q14258 630 aaKnown RBP17.74■□□□□ 0.43
PDLIM3-202ENST00000284770 TMEM164Q5U3C3 297 aa17.74■□□□□ 0.43
PDLIM3-202ENST00000284770 OVCH1Q7RTY7 1134 aa17.74■□□□□ 0.43
PDLIM3-202ENST00000284770 ASB9Q96DX5 294 aa17.74■□□□□ 0.43
PDLIM3-202ENST00000284770 IKZF5Q9H5V7 419 aa17.74■□□□□ 0.43
PDLIM3-202ENST00000284770 CXorf36Q9H7Y0 433 aa17.74■□□□□ 0.43
PDLIM3-202ENST00000284770 IFT80Q9P2H3 777 aaPredicted RBP17.74■□□□□ 0.43
PDLIM3-202ENST00000284770 L3MBTL1Q9Y468 752 aa17.74■□□□□ 0.43
PDLIM3-202ENST00000284770 CLDN16Q9Y5I7 305 aa17.74■□□□□ 0.43
PDLIM3-202ENST00000284770 SEC16AO15027 2179 aa17.74■□□□□ 0.43
PDLIM3-202ENST00000284770 DMXL1Q9Y485 3027 aa17.74■□□□□ 0.43
PDLIM3-202ENST00000284770 PTPRZ1P23471 2315 aaPredicted RBP17.74■□□□□ 0.43
PDLIM3-202ENST00000284770 FAM149AA5PLN7 773 aa17.74■□□□□ 0.43
PDLIM3-202ENST00000284770 OR2W5A6NFC9 320 aa17.74■□□□□ 0.43
PDLIM3-202ENST00000284770 STK17BO94768 372 aa17.74■□□□□ 0.43
PDLIM3-202ENST00000284770 ATP1B1P05026 303 aa17.74■□□□□ 0.43
PDLIM3-202ENST00000284770 SLC35E2P0CK97 266 aa17.74■□□□□ 0.43
PDLIM3-202ENST00000284770 EEFSECP57772 596 aaKnown RBP17.74■□□□□ 0.43
PDLIM3-202ENST00000284770 OCA2Q04671 838 aa17.74■□□□□ 0.43
PDLIM3-202ENST00000284770 CCNIQ14094 377 aa17.74■□□□□ 0.43
PDLIM3-202ENST00000284770 LCN10Q6JVE6 187 aa17.74■□□□□ 0.43
PDLIM3-202ENST00000284770 QSOX2Q6ZRP7 698 aa17.74■□□□□ 0.43
PDLIM3-202ENST00000284770 STT3BQ8TCJ2 826 aa17.74■□□□□ 0.43
PDLIM3-202ENST00000284770 SH3GL1Q99961 368 aa17.74■□□□□ 0.43
PDLIM3-202ENST00000284770 CPPED1Q9BRF8 314 aaPredicted RBP17.74■□□□□ 0.43
PDLIM3-202ENST00000284770 ALG2Q9H553 416 aa17.74■□□□□ 0.43
PDLIM3-202ENST00000284770 SIRT3Q9NTG7 399 aaPredicted RBP17.74■□□□□ 0.43
PDLIM3-202ENST00000284770 SNX8Q9Y5X2 465 aa17.74■□□□□ 0.43
PDLIM3-202ENST00000284770 C9orf172C9J069 976 aa17.73■□□□□ 0.43
PDLIM3-202ENST00000284770 TGFBR3LH3BV60 316 aa17.73■□□□□ 0.43
PDLIM3-202ENST00000284770 ALBP02768 609 aa17.73■□□□□ 0.43
PDLIM3-202ENST00000284770 MAOAP21397 527 aa17.73■□□□□ 0.43
PDLIM3-202ENST00000284770 UQCRC2P22695 453 aa17.73■□□□□ 0.43
PDLIM3-202ENST00000284770 GPC1P35052 558 aa17.73■□□□□ 0.43
PDLIM3-202ENST00000284770 GSK3BP49841 420 aa17.73■□□□□ 0.43
PDLIM3-202ENST00000284770 CDK9P50750 372 aaKnown RBP17.73■□□□□ 0.43
PDLIM3-202ENST00000284770 LIPEQ05469 1076 aa17.73■□□□□ 0.43
PDLIM3-202ENST00000284770 BIKQ13323 160 aa17.73■□□□□ 0.43
PDLIM3-202ENST00000284770 GAB1Q13480 694 aa17.73■□□□□ 0.43
PDLIM3-202ENST00000284770 RSPO4Q2I0M5 234 aaPredicted RBP17.73■□□□□ 0.43
PDLIM3-202ENST00000284770 MINDY4Q4G0A6 757 aa17.73■□□□□ 0.43
PDLIM3-202ENST00000284770 CPZQ66K79 652 aa17.73■□□□□ 0.43
PDLIM3-202ENST00000284770 ZNF517Q6ZMY9 492 aaPredicted RBP17.73■□□□□ 0.43
PDLIM3-202ENST00000284770 GALNT15Q8N3T1 639 aa17.73■□□□□ 0.43
PDLIM3-202ENST00000284770 OR9A2Q8NGT5 310 aa17.73■□□□□ 0.43
PDLIM3-202ENST00000284770 FKBP10Q96AY3 582 aa17.73■□□□□ 0.43
PDLIM3-202ENST00000284770 AURKBQ96GD4 344 aaPredicted RBP17.73■□□□□ 0.43
PDLIM3-202ENST00000284770 PTCHD1Q96NR3 888 aa17.73■□□□□ 0.43
PDLIM3-202ENST00000284770 ALOXE3Q9BYJ1 711 aa17.73■□□□□ 0.43
PDLIM3-202ENST00000284770 PCDHAC1Q9H158 963 aa17.73■□□□□ 0.43
PDLIM3-202ENST00000284770 SLC26A1Q9H2B4 701 aa17.73■□□□□ 0.43
PDLIM3-202ENST00000284770 AKIRIN1Q9H9L7 192 aaPredicted RBP17.73■□□□□ 0.43
PDLIM3-202ENST00000284770 SEMA3GQ9NS98 782 aa17.73■□□□□ 0.43
PDLIM3-202ENST00000284770 C14orf105Q9NVL8 296 aa17.73■□□□□ 0.43
PDLIM3-202ENST00000284770 DLL3Q9NYJ7 618 aa17.73■□□□□ 0.43
PDLIM3-202ENST00000284770 GMEB1Q9Y692 573 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms