RNA–Protein interactions for RNA: ENST00000284049.7

CHD1-201, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1, Length 6,457 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-201ENST00000284049 SPEF2Q9C093 1822 aa2.57□□□□□ -2
CHD1-201ENST00000284049 ECI2O75521 394 aa2.57□□□□□ -2
CHD1-201ENST00000284049 EFEMP2O95967 443 aa2.57□□□□□ -2
CHD1-201ENST00000284049 CXCL10P02778 98 aa2.57□□□□□ -2
CHD1-201ENST00000284049 GRIA3P42263 894 aa2.57□□□□□ -2
CHD1-201ENST00000284049 RAB7AP51149 207 aa2.57□□□□□ -2
CHD1-201ENST00000284049 PEX3P56589 373 aa2.57□□□□□ -2
CHD1-201ENST00000284049 PDIA5Q14554 519 aa2.57□□□□□ -2
CHD1-201ENST00000284049 MESDQ14696 234 aa2.57□□□□□ -2
CHD1-201ENST00000284049 PHLDA2Q53GA4 152 aa2.57□□□□□ -2
CHD1-201ENST00000284049 C9orf135Q5VTT2 229 aa2.57□□□□□ -2
CHD1-201ENST00000284049 CDC42EP5Q6NZY7 148 aa2.57□□□□□ -2
CHD1-201ENST00000284049 RBM44Q6ZP01 1051 aaKnown RBP2.57□□□□□ -2
CHD1-201ENST00000284049 Q6ZTK2 550 aa2.57□□□□□ -2
CHD1-201ENST00000284049 POLNQ7Z5Q5 900 aa2.57□□□□□ -2
CHD1-201ENST00000284049 MARVELD2Q8N4S9 558 aa2.57□□□□□ -2
CHD1-201ENST00000284049 GCSAMQ8N6F7 178 aa2.57□□□□□ -2
CHD1-201ENST00000284049 PIH1D2Q8WWB5 315 aa2.57□□□□□ -2
CHD1-201ENST00000284049 Q96MF0 132 aa2.57□□□□□ -2
CHD1-201ENST00000284049 INPP4AQ96PE3 977 aaPredicted RBP2.57□□□□□ -2
CHD1-201ENST00000284049 TIMP4Q99727 224 aa2.57□□□□□ -2
CHD1-201ENST00000284049 CBWD1Q9BRT8 395 aa2.57□□□□□ -2
CHD1-201ENST00000284049 TRIM62Q9BVG3 475 aa2.57□□□□□ -2
CHD1-201ENST00000284049 VCPKMTQ9H867 229 aa2.57□□□□□ -2
CHD1-201ENST00000284049 SLC22A11Q9NSA0 550 aa2.57□□□□□ -2
CHD1-201ENST00000284049 SPHK1Q9NYA1 384 aa2.57□□□□□ -2
CHD1-201ENST00000284049 TNNQ9UQP3 1299 aa2.57□□□□□ -2
CHD1-201ENST00000284049 ARFGEF1Q9Y6D6 1849 aa2.57□□□□□ -2
CHD1-201ENST00000284049 C4orf47A7E2U8 309 aa2.57□□□□□ -2
CHD1-201ENST00000284049 LINC00473A8K010 186 aa2.57□□□□□ -2
CHD1-201ENST00000284049 KIAA1324LA8MWY0 1029 aaPredicted RBP2.57□□□□□ -2
CHD1-201ENST00000284049 NPIPA2E9PIF3 369 aa2.57□□□□□ -2
CHD1-201ENST00000284049 RAF1P04049 648 aa2.57□□□□□ -2
CHD1-201ENST00000284049 RNASE1P07998 156 aaKnown RBP2.57□□□□□ -2
CHD1-201ENST00000284049 ACO1P21399 889 aaKnown RBP2.57□□□□□ -2
CHD1-201ENST00000284049 RPL13AP40429 203 aaKnown RBP2.57□□□□□ -2
CHD1-201ENST00000284049 OR1G1P47890 313 aa2.57□□□□□ -2
CHD1-201ENST00000284049 SLC1A6P48664 564 aa2.57□□□□□ -2
CHD1-201ENST00000284049 YWHAEP62258 255 aaKnown RBP2.57□□□□□ -2
CHD1-201ENST00000284049 TUBA1BP68363 451 aa2.57□□□□□ -2
CHD1-201ENST00000284049 GHRHRQ02643 423 aa2.57□□□□□ -2
CHD1-201ENST00000284049 KLC1Q07866 573 aa2.57□□□□□ -2
CHD1-201ENST00000284049 TXNRD1Q16881 649 aa2.57□□□□□ -2
CHD1-201ENST00000284049 CCDC142Q17RM4 750 aa2.57□□□□□ -2
CHD1-201ENST00000284049 HNRNPA1L2Q32P51 320 aaKnown RBP2.57□□□□□ -2
CHD1-201ENST00000284049 ZNF385BQ569K4 471 aa2.57□□□□□ -2
CHD1-201ENST00000284049 SUMO4Q6EEV6 95 aa2.57□□□□□ -2
CHD1-201ENST00000284049 C19orf35Q6ZS72 473 aa2.57□□□□□ -2
CHD1-201ENST00000284049 TUBA1AQ71U36 451 aa2.57□□□□□ -2
CHD1-201ENST00000284049 ATG4DQ86TL0 474 aaPredicted RBP2.57□□□□□ -2
CHD1-201ENST00000284049 BIVMQ86UB2 503 aa2.57□□□□□ -2
CHD1-201ENST00000284049 LRRC56Q8IYG6 542 aaPredicted RBP2.57□□□□□ -2
CHD1-201ENST00000284049 OR14A16Q8NHC5 309 aa2.57□□□□□ -2
CHD1-201ENST00000284049 CA5BP1Q8WTZ4 195 aa2.57□□□□□ -2
CHD1-201ENST00000284049 SLC38A4Q969I6 547 aa2.57□□□□□ -2
CHD1-201ENST00000284049 PHF21AQ96BD5 680 aa2.57□□□□□ -2
CHD1-201ENST00000284049 RAB39BQ96DA2 213 aa2.57□□□□□ -2
CHD1-201ENST00000284049 BPIFA2Q96DR5 249 aa2.57□□□□□ -2
CHD1-201ENST00000284049 TXNDC15Q96J42 360 aa2.57□□□□□ -2
CHD1-201ENST00000284049 LURAP1Q96LR2 239 aa2.57□□□□□ -2
CHD1-201ENST00000284049 AGPAT1Q99943 283 aa2.57□□□□□ -2
CHD1-201ENST00000284049 TDRD1Q9BXT4 1180 aaKnown RBP2.57□□□□□ -2
CHD1-201ENST00000284049 TM6SF1Q9BZW5 370 aa2.57□□□□□ -2
CHD1-201ENST00000284049 NANSQ9NR45 359 aa2.57□□□□□ -2
CHD1-201ENST00000284049 GSN-AS1Q9NRJ2 163 aa2.57□□□□□ -2
CHD1-201ENST00000284049 ERRFI1Q9UJM3 462 aaPredicted RBP2.57□□□□□ -2
CHD1-201ENST00000284049 ABCG2Q9UNQ0 655 aa2.57□□□□□ -2
CHD1-201ENST00000284049 VDAC3Q9Y277 283 aa2.57□□□□□ -2
CHD1-201ENST00000284049 ZHX2Q9Y6X8 837 aa2.57□□□□□ -2
CHD1-201ENST00000284049 ALOX15BO15296 676 aa2.57□□□□□ -2
CHD1-201ENST00000284049 IVLP07476 585 aa2.57□□□□□ -2
CHD1-201ENST00000284049 PLEKP08567 350 aaPredicted RBP2.57□□□□□ -2
CHD1-201ENST00000284049 INSRRP14616 1297 aa2.57□□□□□ -2
CHD1-201ENST00000284049 MSH3P20585 1137 aa2.57□□□□□ -2
CHD1-201ENST00000284049 PRKACBP22694 351 aa2.57□□□□□ -2
CHD1-201ENST00000284049 CD1CP29017 333 aa2.57□□□□□ -2
CHD1-201ENST00000284049 CLDN17P56750 224 aa2.57□□□□□ -2
CHD1-201ENST00000284049 CCDC14Q49A88 953 aa2.57□□□□□ -2
CHD1-201ENST00000284049 BCL7AQ4VC05 210 aa2.57□□□□□ -2
CHD1-201ENST00000284049 B3GNTL1Q67FW5 361 aaPredicted RBP2.57□□□□□ -2
CHD1-201ENST00000284049 ATG9AQ7Z3C6 839 aa2.57□□□□□ -2
CHD1-201ENST00000284049 ZNF761Q86XN6 746 aaPredicted RBP2.57□□□□□ -2
CHD1-201ENST00000284049 LINC01356Q8N9X3 169 aa2.57□□□□□ -2
CHD1-201ENST00000284049 COLGALT1Q8NBJ5 622 aa2.57□□□□□ -2
CHD1-201ENST00000284049 FBXL13Q8NEE6 735 aa2.57□□□□□ -2
CHD1-201ENST00000284049 OR52N4Q8NGI2 321 aa2.57□□□□□ -2
CHD1-201ENST00000284049 DTX3LQ8TDB6 740 aa2.57□□□□□ -2
CHD1-201ENST00000284049 CHPT1Q8WUD6 406 aa2.57□□□□□ -2
CHD1-201ENST00000284049 TMEM174Q8WUU8 243 aa2.57□□□□□ -2
CHD1-201ENST00000284049 SNRNP40Q96DI7 357 aaKnown RBP2.57□□□□□ -2
CHD1-201ENST00000284049 C3orf30Q96M34 536 aa2.57□□□□□ -2
CHD1-201ENST00000284049 UHRF2Q96PU4 802 aa2.57□□□□□ -2
CHD1-201ENST00000284049 NPAS2Q99743 824 aa2.57□□□□□ -2
CHD1-201ENST00000284049 GLT8D2Q9H1C3 349 aa2.57□□□□□ -2
CHD1-201ENST00000284049 AUNIPQ9H7T9 357 aa2.57□□□□□ -2
CHD1-201ENST00000284049 MED17Q9NVC6 651 aa2.57□□□□□ -2
CHD1-201ENST00000284049 AGO2Q9UKV8 859 aaKnown RBP2.57□□□□□ -2
CHD1-201ENST00000284049 A0A0U1RQS6 177 aa2.57□□□□□ -2
CHD1-201ENST00000284049 KLK8O60259 260 aa2.57□□□□□ -2
CHD1-201ENST00000284049 PRAF2O60831 178 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms