RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 MLLT1Q03111 559 aaPredicted RBP8.78□□□□□ -1
PDGFC-201ENST00000274071 FABP9Q0Z7S8 132 aa8.78□□□□□ -1
PDGFC-201ENST00000274071 SYTL3Q4VX76 610 aa8.78□□□□□ -1
PDGFC-201ENST00000274071 CRTC1Q6UUV9 634 aa8.78□□□□□ -1
PDGFC-201ENST00000274071 PGAP1Q75T13 922 aa8.78□□□□□ -1
PDGFC-201ENST00000274071 TRIM69Q86WT6 500 aa8.78□□□□□ -1
PDGFC-201ENST00000274071 SVBPQ8N300 66 aa8.78□□□□□ -1
PDGFC-201ENST00000274071 SYT14Q8NB59 555 aa8.78□□□□□ -1
PDGFC-201ENST00000274071 REPS2Q8NFH8 660 aa8.78□□□□□ -1
PDGFC-201ENST00000274071 THAP6Q8TBB0 222 aa8.78□□□□□ -1
PDGFC-201ENST00000274071 C12orf42Q96LP6 360 aa8.78□□□□□ -1
PDGFC-201ENST00000274071 B3GNT5Q9BYG0 378 aa8.78□□□□□ -1
PDGFC-201ENST00000274071 PRKD2Q9BZL6 878 aa8.78□□□□□ -1
PDGFC-201ENST00000274071 CHIAQ9BZP6 476 aa8.78□□□□□ -1
PDGFC-201ENST00000274071 SAP130Q9H0E3 1048 aa8.78□□□□□ -1
PDGFC-201ENST00000274071 ENKD1Q9H0I2 346 aa8.78□□□□□ -1
PDGFC-201ENST00000274071 SLC6A20Q9NP91 592 aa8.78□□□□□ -1
PDGFC-201ENST00000274071 AKAP7Q9P0M2 348 aaPredicted RBP8.78□□□□□ -1
PDGFC-201ENST00000274071 CFAP97Q9P2B7 532 aa8.78□□□□□ -1
PDGFC-201ENST00000274071 TCEAL9Q9UHQ7 104 aa8.78□□□□□ -1
PDGFC-201ENST00000274071 ZNF214Q9UL59 606 aaPredicted RBP8.78□□□□□ -1
PDGFC-201ENST00000274071 ADAMTS5Q9UNA0 930 aa8.78□□□□□ -1
PDGFC-201ENST00000274071 CRYL1Q9Y2S2 319 aa8.78□□□□□ -1
PDGFC-201ENST00000274071 LOXHD1Q8IVV2 1947 aa8.78□□□□□ -1
PDGFC-201ENST00000274071 PRSS47A8MTI9 375 aa8.78□□□□□ -1
PDGFC-201ENST00000274071 CDC123O75794 336 aaPredicted RBP8.78□□□□□ -1
PDGFC-201ENST00000274071 HPXP02790 462 aa8.78□□□□□ -1
PDGFC-201ENST00000274071 RB1P06400 928 aa8.78□□□□□ -1
PDGFC-201ENST00000274071 NR2C1P13056 603 aa8.78□□□□□ -1
PDGFC-201ENST00000274071 BPIP17213 487 aa8.78□□□□□ -1
PDGFC-201ENST00000274071 HOXB6P17509 224 aaKnown RBP8.78□□□□□ -1
PDGFC-201ENST00000274071 CYP2B6P20813 491 aa8.78□□□□□ -1
PDGFC-201ENST00000274071 G0S2P27469 103 aa8.78□□□□□ -1
PDGFC-201ENST00000274071 PRDX3P30048 256 aaKnown RBP8.78□□□□□ -1
PDGFC-201ENST00000274071 GKP32189 559 aa8.78□□□□□ -1
PDGFC-201ENST00000274071 SLC1A3P43003 542 aa8.78□□□□□ -1
PDGFC-201ENST00000274071 AFF1P51825 1210 aaKnown RBP8.78□□□□□ -1
PDGFC-201ENST00000274071 RAB5BP61020 215 aa8.78□□□□□ -1
PDGFC-201ENST00000274071 NFKB2Q00653 900 aa8.78□□□□□ -1
PDGFC-201ENST00000274071 DHODHQ02127 395 aa8.78□□□□□ -1
PDGFC-201ENST00000274071 ZNF155Q12901 538 aaPredicted RBP8.78□□□□□ -1
PDGFC-201ENST00000274071 GANABQ14697 944 aaKnown RBP8.78□□□□□ -1
PDGFC-201ENST00000274071 SUPT20HL1Q3ZLR7 823 aa8.78□□□□□ -1
PDGFC-201ENST00000274071 MPPE1Q53F39 396 aa8.78□□□□□ -1
PDGFC-201ENST00000274071 XKR7Q5GH72 579 aa8.78□□□□□ -1
PDGFC-201ENST00000274071 GCNT6Q5T4J0 391 aa8.78□□□□□ -1
PDGFC-201ENST00000274071 OTUD1Q5VV17 481 aaPredicted RBP8.78□□□□□ -1
PDGFC-201ENST00000274071 RAET1GQ6H3X3 334 aa8.78□□□□□ -1
PDGFC-201ENST00000274071 ANGPTL8Q6UXH0 198 aa8.78□□□□□ -1
PDGFC-201ENST00000274071 VSIG10LQ86VR7 867 aa8.78□□□□□ -1
PDGFC-201ENST00000274071 ZNF687Q8N1G0 1237 aa8.78□□□□□ -1
PDGFC-201ENST00000274071 AVL9Q8NBF6 648 aa8.78□□□□□ -1
PDGFC-201ENST00000274071 C11orf65Q8NCR3 313 aa8.78□□□□□ -1
PDGFC-201ENST00000274071 C12orf66Q96MD2 445 aa8.78□□□□□ -1
PDGFC-201ENST00000274071 GGACTQ9BVM4 153 aa8.78□□□□□ -1
PDGFC-201ENST00000274071 SPATA5L1Q9BVQ7 753 aa8.78□□□□□ -1
PDGFC-201ENST00000274071 NLNQ9BYT8 704 aa8.78□□□□□ -1
PDGFC-201ENST00000274071 ZFP57Q9NU63 452 aa8.78□□□□□ -1
PDGFC-201ENST00000274071 PCDHB7Q9Y5E2 793 aa8.78□□□□□ -1
PDGFC-201ENST00000274071 PCDHA10Q9Y5I2 948 aa8.78□□□□□ -1
PDGFC-201ENST00000274071 USP3Q9Y6I4 520 aa8.78□□□□□ -1
PDGFC-201ENST00000274071 RLFQ13129 1914 aa8.78□□□□□ -1
PDGFC-201ENST00000274071 ZNF638Q14966 1978 aaKnown RBP8.78□□□□□ -1
PDGFC-201ENST00000274071 LRIT2A6NDA9 550 aa8.77□□□□□ -1.01
PDGFC-201ENST00000274071 NEDD8-MDP1E9PL57 170 aa8.77□□□□□ -1.01
PDGFC-201ENST00000274071 TGM5O43548 720 aa8.77□□□□□ -1.01
PDGFC-201ENST00000274071 CRCPO75575 148 aa8.77□□□□□ -1.01
PDGFC-201ENST00000274071 RP2O75695 350 aa8.77□□□□□ -1.01
PDGFC-201ENST00000274071 UBXN7O94888 489 aa8.77□□□□□ -1.01
PDGFC-201ENST00000274071 G6PDP11413 515 aa8.77□□□□□ -1.01
PDGFC-201ENST00000274071 PTPN3P26045 913 aa8.77□□□□□ -1.01
PDGFC-201ENST00000274071 S100A11P31949 105 aa8.77□□□□□ -1.01
PDGFC-201ENST00000274071 PXNP49023 591 aaPredicted RBP8.77□□□□□ -1.01
PDGFC-201ENST00000274071 OAZ1P54368 228 aa8.77□□□□□ -1.01
PDGFC-201ENST00000274071 MEF2AQ02078 507 aaPredicted RBP8.77□□□□□ -1.01
PDGFC-201ENST00000274071 MAP4K2Q12851 820 aa8.77□□□□□ -1.01
PDGFC-201ENST00000274071 PDZK1IP1Q13113 114 aa8.77□□□□□ -1.01
PDGFC-201ENST00000274071 TMEM255AQ5JRV8 349 aa8.77□□□□□ -1.01
PDGFC-201ENST00000274071 MANEAQ5SRI9 462 aa8.77□□□□□ -1.01
PDGFC-201ENST00000274071 TMIGD1Q6UXZ0 262 aa8.77□□□□□ -1.01
PDGFC-201ENST00000274071 RAB44Q7Z6P3 723 aaPredicted RBP8.77□□□□□ -1.01
PDGFC-201ENST00000274071 PLEKHH3Q7Z736 793 aa8.77□□□□□ -1.01
PDGFC-201ENST00000274071 NUDT13Q86X67 352 aa8.77□□□□□ -1.01
PDGFC-201ENST00000274071 NAXDQ8IW45 347 aa8.77□□□□□ -1.01
PDGFC-201ENST00000274071 SPAG16Q8N0X2 631 aa8.77□□□□□ -1.01
PDGFC-201ENST00000274071 KDF1Q8NAX2 398 aaPredicted RBP8.77□□□□□ -1.01
PDGFC-201ENST00000274071 RELL2Q8NC24 303 aaPredicted RBP8.77□□□□□ -1.01
PDGFC-201ENST00000274071 C2CD4AQ8NCU7 369 aaPredicted RBP8.77□□□□□ -1.01
PDGFC-201ENST00000274071 PXT1Q8NFP0 134 aa8.77□□□□□ -1.01
PDGFC-201ENST00000274071 OR10H5Q8NGA6 315 aa8.77□□□□□ -1.01
PDGFC-201ENST00000274071 OR52K2Q8NGK3 314 aa8.77□□□□□ -1.01
PDGFC-201ENST00000274071 METTL6Q8TCB7 284 aa8.77□□□□□ -1.01
PDGFC-201ENST00000274071 TM9SF4Q92544 642 aa8.77□□□□□ -1.01
PDGFC-201ENST00000274071 KHSRPQ92945 711 aaKnown RBP eCLIP8.77□□□□□ -1.01
PDGFC-201ENST00000274071 THAP7Q9BT49 309 aaPredicted RBP8.77□□□□□ -1.01
PDGFC-201ENST00000274071 POLR2J2Q9GZM3 115 aaKnown RBP8.77□□□□□ -1.01
PDGFC-201ENST00000274071 REEP1Q9H902 201 aa8.77□□□□□ -1.01
PDGFC-201ENST00000274071 SEMA4BQ9NPR2 832 aaPredicted RBP8.77□□□□□ -1.01
PDGFC-201ENST00000274071 CNOT2Q9NZN8 540 aaKnown RBP8.77□□□□□ -1.01
PDGFC-201ENST00000274071 RCOR3Q9P2K3 495 aaPredicted RBP8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 171.1 ms