RNA–Protein interactions for RNA: ENST00000274030.10

USP53-201, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP53, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-201ENST00000274030 HSD17B12Q53GQ0 312 aa10.96□□□□□ -0.66
USP53-201ENST00000274030 RAET1LQ5VY80 246 aa10.96□□□□□ -0.66
USP53-201ENST00000274030 C15orf39Q6ZRI6 1047 aa10.96□□□□□ -0.66
USP53-201ENST00000274030 KBTBD6Q86V97 674 aa10.96□□□□□ -0.66
USP53-201ENST00000274030 FAM217AQ8IXS0 508 aa10.96□□□□□ -0.66
USP53-201ENST00000274030 OR56A3Q8NH54 315 aa10.96□□□□□ -0.66
USP53-201ENST00000274030 HDAC2Q92769 488 aaKnown RBP10.96□□□□□ -0.66
USP53-201ENST00000274030 LRR1Q96L50 414 aa10.96□□□□□ -0.66
USP53-201ENST00000274030 MROQ9BYG7 248 aa10.96□□□□□ -0.66
USP53-201ENST00000274030 EHD1Q9H4M9 534 aa10.96□□□□□ -0.66
USP53-201ENST00000274030 PREBQ9HCU5 417 aa10.96□□□□□ -0.66
USP53-201ENST00000274030 PPP4R1LQ9P1A2 415 aa10.96□□□□□ -0.66
USP53-201ENST00000274030 C1orf226A1L170 272 aa10.96□□□□□ -0.66
USP53-201ENST00000274030 FAAHO00519 579 aa10.96□□□□□ -0.66
USP53-201ENST00000274030 DLGAP1O14490 977 aa10.96□□□□□ -0.66
USP53-201ENST00000274030 VEGFDO43915 354 aa10.96□□□□□ -0.66
USP53-201ENST00000274030 FAM189A1O60320 539 aa10.96□□□□□ -0.66
USP53-201ENST00000274030 TOXO94900 526 aa10.96□□□□□ -0.66
USP53-201ENST00000274030 FARS2O95363 451 aaKnown RBP10.96□□□□□ -0.66
USP53-201ENST00000274030 LAMP1P11279 417 aa10.96□□□□□ -0.66
USP53-201ENST00000274030 MSX1P28360 303 aa10.96□□□□□ -0.66
USP53-201ENST00000274030 EIF2S3P41091 472 aaKnown RBP10.96□□□□□ -0.66
USP53-201ENST00000274030 GRIA2P42262 883 aa10.96□□□□□ -0.66
USP53-201ENST00000274030 MECP2P51608 486 aaKnown RBP10.96□□□□□ -0.66
USP53-201ENST00000274030 GTDC1Q4AE62 458 aa10.96□□□□□ -0.66
USP53-201ENST00000274030 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.96□□□□□ -0.66
USP53-201ENST00000274030 BLOC1S3Q6QNY0 202 aa10.96□□□□□ -0.66
USP53-201ENST00000274030 TMPRSS12Q86WS5 348 aa10.96□□□□□ -0.66
USP53-201ENST00000274030 DENND1AQ8TEH3 1009 aa10.96□□□□□ -0.66
USP53-201ENST00000274030 TMEM234Q8WY98 164 aa10.96□□□□□ -0.66
USP53-201ENST00000274030 KIAA1143Q96AT1 154 aaPredicted RBP10.96□□□□□ -0.66
USP53-201ENST00000274030 FAM210AQ96ND0 272 aa10.96□□□□□ -0.66
USP53-201ENST00000274030 HDHD5Q9BXW7 423 aa10.96□□□□□ -0.66
USP53-201ENST00000274030 PADI2Q9Y2J8 665 aa10.96□□□□□ -0.66
USP53-201ENST00000274030 GPR52Q9Y2T5 361 aa10.96□□□□□ -0.66
USP53-201ENST00000274030 FANCGO15287 622 aa10.95□□□□□ -0.66
USP53-201ENST00000274030 SLC16A5O15375 505 aa10.95□□□□□ -0.66
USP53-201ENST00000274030 SLITRK5O94991 958 aa10.95□□□□□ -0.66
USP53-201ENST00000274030 EPCAMP16422 314 aa10.95□□□□□ -0.66
USP53-201ENST00000274030 MAGEA8P43361 318 aa10.95□□□□□ -0.66
USP53-201ENST00000274030 ERVPABLB-1P60509 514 aa10.95□□□□□ -0.66
USP53-201ENST00000274030 OR4C11Q6IEV9 310 aa10.95□□□□□ -0.66
USP53-201ENST00000274030 XKRXQ6PP77 449 aa10.95□□□□□ -0.66
USP53-201ENST00000274030 LRRC69Q6ZNQ3 347 aa10.95□□□□□ -0.66
USP53-201ENST00000274030 TRIM73Q86UV7 250 aa10.95□□□□□ -0.66
USP53-201ENST00000274030 CENPSQ8N2Z9 138 aa10.95□□□□□ -0.66
USP53-201ENST00000274030 MINDY2Q8NBR6 621 aa10.95□□□□□ -0.66
USP53-201ENST00000274030 ACOT12Q8WYK0 555 aa10.95□□□□□ -0.66
USP53-201ENST00000274030 MOAP1Q96BY2 351 aa10.95□□□□□ -0.66
USP53-201ENST00000274030 SLC25A44Q96H78 314 aaPredicted RBP10.95□□□□□ -0.66
USP53-201ENST00000274030 ZC3H10Q96K80 434 aaKnown RBP10.95□□□□□ -0.66
USP53-201ENST00000274030 SCP2D1Q9UJQ7 156 aa10.95□□□□□ -0.66
USP53-201ENST00000274030 SPO11Q9Y5K1 396 aa10.95□□□□□ -0.66
USP53-201ENST00000274030 VSTM5A8MXK1 200 aa10.95□□□□□ -0.66
USP53-201ENST00000274030 DISC1C4P0D8 188 aa10.95□□□□□ -0.66
USP53-201ENST00000274030 LRRN3E7EW58 273 aa10.95□□□□□ -0.66
USP53-201ENST00000274030 FAM227AF5H4B4 570 aa10.95□□□□□ -0.66
USP53-201ENST00000274030 SFTPBP07988 381 aa10.95□□□□□ -0.66
USP53-201ENST00000274030 RPS3P23396 243 aaKnown RBP eCLIP10.95□□□□□ -0.66
USP53-201ENST00000274030 MEDAGQ5VYS4 303 aa10.95□□□□□ -0.66
USP53-201ENST00000274030 GID4Q8IVV7 300 aa10.95□□□□□ -0.66
USP53-201ENST00000274030 PROKR1Q8TCW9 393 aa10.95□□□□□ -0.66
USP53-201ENST00000274030 C15orf40Q8WUR7 153 aa10.95□□□□□ -0.66
USP53-201ENST00000274030 LRIG1Q96JA1 1093 aa10.95□□□□□ -0.66
USP53-201ENST00000274030 LRRN3Q9H3W5 708 aa10.95□□□□□ -0.66
USP53-201ENST00000274030 PTBP2Q9UKA9 531 aaKnown RBP10.95□□□□□ -0.66
USP53-201ENST00000274030 EEDO75530 441 aaKnown RBP10.95□□□□□ -0.66
USP53-201ENST00000274030 RNH1P13489 461 aaKnown RBP10.95□□□□□ -0.66
USP53-201ENST00000274030 FADDQ13158 208 aa10.95□□□□□ -0.66
USP53-201ENST00000274030 CDK10Q15131 360 aa10.95□□□□□ -0.66
USP53-201ENST00000274030 ISCA2Q86U28 154 aa10.95□□□□□ -0.66
USP53-201ENST00000274030 KLHDC8AQ8IYD2 350 aa10.95□□□□□ -0.66
USP53-201ENST00000274030 PSD4Q8NDX1 1056 aa10.95□□□□□ -0.66
USP53-201ENST00000274030 FUBP1Q96AE4 644 aaKnown RBP10.95□□□□□ -0.66
USP53-201ENST00000274030 APIPQ96GX9 242 aa10.95□□□□□ -0.66
USP53-201ENST00000274030 FEVQ99581 238 aa10.95□□□□□ -0.66
USP53-201ENST00000274030 RDH8Q9NYR8 311 aa10.95□□□□□ -0.66
USP53-201ENST00000274030 UNCXA6NJT0 531 aa10.95□□□□□ -0.66
USP53-201ENST00000274030 INMT-MINDY4F8WBC2 141 aa10.95□□□□□ -0.66
USP53-201ENST00000274030 TP53I11O14683 189 aa10.95□□□□□ -0.66
USP53-201ENST00000274030 RASAL1O95294 804 aa10.95□□□□□ -0.66
USP53-201ENST00000274030 SYNGR4O95473 234 aa10.95□□□□□ -0.66
USP53-201ENST00000274030 NPRL3Q12980 569 aa10.95□□□□□ -0.66
USP53-201ENST00000274030 TCEAL1Q15170 157 aa10.95□□□□□ -0.66
USP53-201ENST00000274030 LPAL2Q16609 132 aa10.95□□□□□ -0.66
USP53-201ENST00000274030 PLEKHG7Q6ZR37 379 aa10.95□□□□□ -0.66
USP53-201ENST00000274030 PIAS4Q8N2W9 510 aaPredicted RBP10.95□□□□□ -0.66
USP53-201ENST00000274030 OR51L1Q8NGJ5 315 aa10.95□□□□□ -0.66
USP53-201ENST00000274030 FCAMRQ8WWV6 532 aa10.95□□□□□ -0.66
USP53-201ENST00000274030 PHOX2BQ99453 314 aa10.95□□□□□ -0.66
USP53-201ENST00000274030 MGLLQ99685 303 aa10.95□□□□□ -0.66
USP53-201ENST00000274030 DZANK1Q9NVP4 752 aa10.95□□□□□ -0.66
USP53-201ENST00000274030 NUFIP1Q9UHK0 495 aaKnown RBP10.95□□□□□ -0.66
USP53-201ENST00000274030 TRBV2A0A0J9YWF9 115 aa10.94□□□□□ -0.66
USP53-201ENST00000274030 MITFO75030 526 aaPredicted RBP10.94□□□□□ -0.66
USP53-201ENST00000274030 GSTT2P0CG29 244 aa10.94□□□□□ -0.66
USP53-201ENST00000274030 GNRHRP30968 328 aa10.94□□□□□ -0.66
USP53-201ENST00000274030 CD68P34810 354 aaPredicted RBP10.94□□□□□ -0.66
USP53-201ENST00000274030 CRISP1P54107 249 aa10.94□□□□□ -0.66
USP53-201ENST00000274030 RPA4Q13156 261 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms