RNA–Protein interactions for RNA: ENST00000273064.10

CNOT9-201, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT9, Length 4,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-201ENST00000273064 IDH3BO43837 385 aa13.89□□□□□ -0.19
CNOT9-201ENST00000273064 GPR37L1O60883 481 aa13.89□□□□□ -0.19
CNOT9-201ENST00000273064 RPP14O95059 124 aaKnown RBP13.89□□□□□ -0.19
CNOT9-201ENST00000273064 NPPBP16860 134 aa13.89□□□□□ -0.19
CNOT9-201ENST00000273064 GSTM2P28161 218 aa13.89□□□□□ -0.19
CNOT9-201ENST00000273064 KCNC3Q14003 757 aa13.89□□□□□ -0.19
CNOT9-201ENST00000273064 TOMM20Q15388 145 aa13.89□□□□□ -0.19
CNOT9-201ENST00000273064 TRIM46Q7Z4K8 759 aa13.89□□□□□ -0.19
CNOT9-201ENST00000273064 TSPYL5Q86VY4 417 aaPredicted RBP13.89□□□□□ -0.19
CNOT9-201ENST00000273064 C12orf40Q86WS4 652 aa13.89□□□□□ -0.19
CNOT9-201ENST00000273064 CYB561A3Q8NBI2 242 aa13.89□□□□□ -0.19
CNOT9-201ENST00000273064 SLC38A3Q99624 504 aa13.89□□□□□ -0.19
CNOT9-201ENST00000273064 POLR1DQ9Y2S0 133 aa13.89□□□□□ -0.19
CNOT9-201ENST00000273064 SNX11Q9Y5W9 270 aa13.89□□□□□ -0.19
CNOT9-201ENST00000273064 DAPL1A0PJW8 107 aa13.88□□□□□ -0.19
CNOT9-201ENST00000273064 CAPNS1P04632 268 aa13.88□□□□□ -0.19
CNOT9-201ENST00000273064 IGFBP1P08833 259 aaPredicted RBP13.88□□□□□ -0.19
CNOT9-201ENST00000273064 IFI30P13284 250 aa13.88□□□□□ -0.19
CNOT9-201ENST00000273064 GRSF1Q12849 480 aaKnown RBP eCLIP13.88□□□□□ -0.19
CNOT9-201ENST00000273064 PTGES3Q15185 160 aaKnown RBP13.88□□□□□ -0.19
CNOT9-201ENST00000273064 SLCO4C1Q6ZQN7 724 aa13.88□□□□□ -0.19
CNOT9-201ENST00000273064 SPRED1Q7Z699 444 aa13.88□□□□□ -0.19
CNOT9-201ENST00000273064 ADIPOR2Q86V24 386 aa13.88□□□□□ -0.19
CNOT9-201ENST00000273064 HORMAD2Q8N7B1 307 aa13.88□□□□□ -0.19
CNOT9-201ENST00000273064 C16orf58Q96GQ5 468 aa13.88□□□□□ -0.19
CNOT9-201ENST00000273064 RDH12Q96NR8 316 aa13.88□□□□□ -0.19
CNOT9-201ENST00000273064 NIPSNAP1Q9BPW8 284 aa13.88□□□□□ -0.19
CNOT9-201ENST00000273064 BRD7Q9NPI1 651 aa13.88□□□□□ -0.19
CNOT9-201ENST00000273064 TMEM9Q9P0T7 183 aa13.88□□□□□ -0.19
CNOT9-201ENST00000273064 ZFC3H1O60293 1989 aaKnown RBP13.88□□□□□ -0.19
CNOT9-201ENST00000273064 SH3PXD2BA1X283 911 aa13.88□□□□□ -0.19
CNOT9-201ENST00000273064 WWP2O00308 870 aa13.88□□□□□ -0.19
CNOT9-201ENST00000273064 FZD6O60353 706 aa13.88□□□□□ -0.19
CNOT9-201ENST00000273064 LDB3O75112 727 aa13.88□□□□□ -0.19
CNOT9-201ENST00000273064 ZNF821O75541 412 aaPredicted RBP13.88□□□□□ -0.19
CNOT9-201ENST00000273064 SSTR4P31391 388 aa13.88□□□□□ -0.19
CNOT9-201ENST00000273064 DUSP7Q16829 419 aa13.88□□□□□ -0.19
CNOT9-201ENST00000273064 CTU2Q2VPK5 515 aaKnown RBP13.88□□□□□ -0.19
CNOT9-201ENST00000273064 RTL4Q6ZR62 310 aa13.88□□□□□ -0.19
CNOT9-201ENST00000273064 USP43Q70EL4 1123 aa13.88□□□□□ -0.19
CNOT9-201ENST00000273064 IGFN1Q86VF2 1251 aa13.88□□□□□ -0.19
CNOT9-201ENST00000273064 OR9A2Q8NGT5 310 aa13.88□□□□□ -0.19
CNOT9-201ENST00000273064 SPPL3Q8TCT6 385 aa13.88□□□□□ -0.19
CNOT9-201ENST00000273064 SNX33Q8WV41 574 aa13.88□□□□□ -0.19
CNOT9-201ENST00000273064 RETREG1Q9H6L5 497 aa13.88□□□□□ -0.19
CNOT9-201ENST00000273064 RNF167Q9H6Y7 350 aa13.88□□□□□ -0.19
CNOT9-201ENST00000273064 CYP8B1Q9UNU6 501 aa13.88□□□□□ -0.19
CNOT9-201ENST00000273064 CCDC88CQ9P219 2028 aa13.88□□□□□ -0.19
CNOT9-201ENST00000273064 CENPXA8MT69 81 aa13.88□□□□□ -0.19
CNOT9-201ENST00000273064 PGRMC2O15173 223 aa13.88□□□□□ -0.19
CNOT9-201ENST00000273064 MAD2L1BPQ15013 274 aaPredicted RBP13.88□□□□□ -0.19
CNOT9-201ENST00000273064 QPRTQ15274 297 aa13.88□□□□□ -0.19
CNOT9-201ENST00000273064 GTF2IRD2BQ6EKJ0 949 aa13.88□□□□□ -0.19
CNOT9-201ENST00000273064 DGLUCYQ7Z3D6 616 aa13.88□□□□□ -0.19
CNOT9-201ENST00000273064 GTF2IRD2Q86UP8 949 aa13.88□□□□□ -0.19
CNOT9-201ENST00000273064 OR4C6Q8NH72 309 aa13.88□□□□□ -0.19
CNOT9-201ENST00000273064 OR5P2Q8WZ92 322 aa13.88□□□□□ -0.19
CNOT9-201ENST00000273064 FAM46AQ96IP4 442 aaKnown RBP13.88□□□□□ -0.19
CNOT9-201ENST00000273064 SLC35C2Q9NQQ7 365 aa13.88□□□□□ -0.19
CNOT9-201ENST00000273064 ENPP4Q9Y6X5 453 aa13.88□□□□□ -0.19
CNOT9-201ENST00000273064 RIF1Q5UIP0 2472 aaKnown RBP13.88□□□□□ -0.19
CNOT9-201ENST00000273064 J3QLW9 94 aa13.87□□□□□ -0.19
CNOT9-201ENST00000273064 GKN3PP0CG01 181 aa13.87□□□□□ -0.19
CNOT9-201ENST00000273064 ZNF19P17023 458 aa13.87□□□□□ -0.19
CNOT9-201ENST00000273064 ITGA1P56199 1179 aa13.87□□□□□ -0.19
CNOT9-201ENST00000273064 CDK3Q00526 305 aa13.87□□□□□ -0.19
CNOT9-201ENST00000273064 HNRNPA0Q13151 305 aaKnown RBP13.87□□□□□ -0.19
CNOT9-201ENST00000273064 ZNF791Q3KP31 576 aaPredicted RBP13.87□□□□□ -0.19
CNOT9-201ENST00000273064 RASSF5Q8WWW0 418 aa13.87□□□□□ -0.19
CNOT9-201ENST00000273064 LRIG1Q96JA1 1093 aa13.87□□□□□ -0.19
CNOT9-201ENST00000273064 TRNT1Q96Q11 434 aaKnown RBP13.87□□□□□ -0.19
CNOT9-201ENST00000273064 LGR4Q9BXB1 951 aa13.87□□□□□ -0.19
CNOT9-201ENST00000273064 ZNF222Q9UK12 451 aa13.87□□□□□ -0.19
CNOT9-201ENST00000273064 PRAMEF10O60809 474 aa13.87□□□□□ -0.19
CNOT9-201ENST00000273064 REM1O75628 298 aa13.87□□□□□ -0.19
CNOT9-201ENST00000273064 P2RY2P41231 377 aa13.87□□□□□ -0.19
CNOT9-201ENST00000273064 RAB28P51157 221 aa13.87□□□□□ -0.19
CNOT9-201ENST00000273064 ZNF267Q14586 743 aaPredicted RBP13.87□□□□□ -0.19
CNOT9-201ENST00000273064 ISG20Q96AZ6 181 aaKnown RBP13.87□□□□□ -0.19
CNOT9-201ENST00000273064 CAMK1GQ96NX5 476 aa13.87□□□□□ -0.19
CNOT9-201ENST00000273064 PNO1Q9NRX1 252 aaKnown RBP13.87□□□□□ -0.19
CNOT9-201ENST00000273064 VNN3Q9NY84 501 aa13.87□□□□□ -0.19
CNOT9-201ENST00000273064 BTNL2Q9UIR0 455 aa13.87□□□□□ -0.19
CNOT9-201ENST00000273064 SDC3O75056 442 aa13.87□□□□□ -0.19
CNOT9-201ENST00000273064 HIST1H2ABP04908 130 aa13.87□□□□□ -0.19
CNOT9-201ENST00000273064 CTSLP07711 333 aa13.87□□□□□ -0.19
CNOT9-201ENST00000273064 FHP07954 510 aa13.87□□□□□ -0.19
CNOT9-201ENST00000273064 PRLHRP49683 370 aa13.87□□□□□ -0.19
CNOT9-201ENST00000273064 CSTF1Q05048 431 aaKnown RBP13.87□□□□□ -0.19
CNOT9-201ENST00000273064 SPHARQ15513 63 aa13.87□□□□□ -0.19
CNOT9-201ENST00000273064 WSCD2Q2TBF2 565 aa13.87□□□□□ -0.19
CNOT9-201ENST00000273064 ALG1LQ6GMV1 187 aa13.87□□□□□ -0.19
CNOT9-201ENST00000273064 USP53Q70EK8 1073 aa13.87□□□□□ -0.19
CNOT9-201ENST00000273064 HIST3H2AQ7L7L0 130 aa13.87□□□□□ -0.19
CNOT9-201ENST00000273064 TMEM150AQ86TG1 271 aa13.87□□□□□ -0.19
CNOT9-201ENST00000273064 GOLM1Q8NBJ4 401 aa13.87□□□□□ -0.19
CNOT9-201ENST00000273064 B3GNT7Q8NFL0 401 aa13.87□□□□□ -0.19
CNOT9-201ENST00000273064 HIST1H2ACQ93077 130 aa13.87□□□□□ -0.19
CNOT9-201ENST00000273064 SLC25A36Q96CQ1 311 aa13.87□□□□□ -0.19
CNOT9-201ENST00000273064 SPNS1Q9H2V7 528 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms