RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 HERVK_113P63132 956 aa8.22□□□□□ -1.09
TPM3-201ENST00000271850 ERVK-8P63133 956 aa8.22□□□□□ -1.09
TPM3-201ENST00000271850 IRF9Q00978 393 aa8.22□□□□□ -1.09
TPM3-201ENST00000271850 TNFRSF17Q02223 184 aa8.22□□□□□ -1.09
TPM3-201ENST00000271850 IRF8Q02556 426 aa8.22□□□□□ -1.09
TPM3-201ENST00000271850 CRYZQ08257 329 aaKnown RBP8.22□□□□□ -1.09
TPM3-201ENST00000271850 SLAMF1Q13291 335 aa8.22□□□□□ -1.09
TPM3-201ENST00000271850 SERTAD2Q14140 314 aa8.22□□□□□ -1.09
TPM3-201ENST00000271850 DCST1Q5T197 706 aa8.22□□□□□ -1.09
TPM3-201ENST00000271850 RIPPLY2Q5TAB7 128 aa8.22□□□□□ -1.09
TPM3-201ENST00000271850 DEPDC1Q5TB30 811 aa8.22□□□□□ -1.09
TPM3-201ENST00000271850 KHDRBS2Q5VWX1 349 aaKnown RBP8.22□□□□□ -1.09
TPM3-201ENST00000271850 GRHL2Q6ISB3 625 aa8.22□□□□□ -1.09
TPM3-201ENST00000271850 TMEM64Q6YI46 380 aa8.22□□□□□ -1.09
TPM3-201ENST00000271850 LRRC70Q7Z2Q7 622 aa8.22□□□□□ -1.09
TPM3-201ENST00000271850 ULK2Q8IYT8 1036 aa8.22□□□□□ -1.09
TPM3-201ENST00000271850 CENPLQ8N0S6 344 aaPredicted RBP8.22□□□□□ -1.09
TPM3-201ENST00000271850 FBXW8Q8N3Y1 598 aa8.22□□□□□ -1.09
TPM3-201ENST00000271850 TNIP2Q8NFZ5 429 aa8.22□□□□□ -1.09
TPM3-201ENST00000271850 OR10Q1Q8NGQ4 319 aa8.22□□□□□ -1.09
TPM3-201ENST00000271850 HUS1BQ8NHY5 278 aa8.22□□□□□ -1.09
TPM3-201ENST00000271850 FBXL20Q96IG2 436 aa8.22□□□□□ -1.09
TPM3-201ENST00000271850 RUNDC3BQ96NL0 473 aa8.22□□□□□ -1.09
TPM3-201ENST00000271850 KRT12Q99456 494 aa8.22□□□□□ -1.09
TPM3-201ENST00000271850 GPATCH1Q9BRR8 931 aaKnown RBP8.22□□□□□ -1.09
TPM3-201ENST00000271850 ERVK-6Q9BXR3 956 aa8.22□□□□□ -1.09
TPM3-201ENST00000271850 CAPS2Q9BXY5 557 aa8.22□□□□□ -1.09
TPM3-201ENST00000271850 UBQLN3Q9H347 655 aa8.22□□□□□ -1.09
TPM3-201ENST00000271850 ZFP64Q9NPA5 681 aa8.22□□□□□ -1.09
TPM3-201ENST00000271850 SAYSD1Q9NPB0 183 aa8.22□□□□□ -1.09
TPM3-201ENST00000271850 DMRT3Q9NQL9 472 aa8.22□□□□□ -1.09
TPM3-201ENST00000271850 CD274Q9NZQ7 290 aa8.22□□□□□ -1.09
TPM3-201ENST00000271850 CRIM1Q9NZV1 1036 aa8.22□□□□□ -1.09
TPM3-201ENST00000271850 ERVK-19Q9WJR5 959 aa8.22□□□□□ -1.09
TPM3-201ENST00000271850 DTX4Q9Y2E6 619 aa8.22□□□□□ -1.09
TPM3-201ENST00000271850 ASB4Q9Y574 426 aa8.22□□□□□ -1.09
TPM3-201ENST00000271850 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.22□□□□□ -1.09
TPM3-201ENST00000271850 EXPH5Q8NEV8 1989 aa8.22□□□□□ -1.09
TPM3-201ENST00000271850 A0A1W2PPR1 153 aa8.21□□□□□ -1.1
TPM3-201ENST00000271850 A0A1W2PR48 441 aa8.21□□□□□ -1.1
TPM3-201ENST00000271850 GLOD5A6NK44 160 aa8.21□□□□□ -1.1
TPM3-201ENST00000271850 PROM1O43490 865 aa8.21□□□□□ -1.1
TPM3-201ENST00000271850 RAD51CO43502 376 aa8.21□□□□□ -1.1
TPM3-201ENST00000271850 KERAO60938 352 aa8.21□□□□□ -1.1
TPM3-201ENST00000271850 WDR1O75083 606 aa8.21□□□□□ -1.1
TPM3-201ENST00000271850 P04436 131 aa8.21□□□□□ -1.1
TPM3-201ENST00000271850 CD1EP15812 388 aa8.21□□□□□ -1.1
TPM3-201ENST00000271850 STMN1P16949 149 aa8.21□□□□□ -1.1
TPM3-201ENST00000271850 TNNI3P19429 210 aa8.21□□□□□ -1.1
TPM3-201ENST00000271850 SSTR4P31391 388 aa8.21□□□□□ -1.1
TPM3-201ENST00000271850 CEACAM8P31997 349 aaPredicted RBP8.21□□□□□ -1.1
TPM3-201ENST00000271850 GP5P40197 560 aa8.21□□□□□ -1.1
TPM3-201ENST00000271850 SSR2P43308 183 aa8.21□□□□□ -1.1
TPM3-201ENST00000271850 TRPC1P48995 793 aa8.21□□□□□ -1.1
TPM3-201ENST00000271850 ZNF136P52737 540 aa8.21□□□□□ -1.1
TPM3-201ENST00000271850 RAB10P61026 200 aa8.21□□□□□ -1.1
TPM3-201ENST00000271850 RPS13P62277 151 aaKnown RBP8.21□□□□□ -1.1
TPM3-201ENST00000271850 DUSP8Q13202 625 aa8.21□□□□□ -1.1
TPM3-201ENST00000271850 MYBPHQ13203 477 aa8.21□□□□□ -1.1
TPM3-201ENST00000271850 SLC10A1Q14973 349 aa8.21□□□□□ -1.1
TPM3-201ENST00000271850 NTRK2Q16620 822 aa8.21□□□□□ -1.1
TPM3-201ENST00000271850 SPRED3Q2MJR0 410 aa8.21□□□□□ -1.1
TPM3-201ENST00000271850 KBTBD12Q3ZCT8 623 aa8.21□□□□□ -1.1
TPM3-201ENST00000271850 ACSF3Q4G176 576 aaPredicted RBP8.21□□□□□ -1.1
TPM3-201ENST00000271850 TMEM35AQ53FP2 167 aa8.21□□□□□ -1.1
TPM3-201ENST00000271850 OR4C11Q6IEV9 310 aa8.21□□□□□ -1.1
TPM3-201ENST00000271850 MED27Q6P2C8 311 aa8.21□□□□□ -1.1
TPM3-201ENST00000271850 PAOXQ6QHF9 649 aa8.21□□□□□ -1.1
TPM3-201ENST00000271850 OPN5Q6U736 354 aa8.21□□□□□ -1.1
TPM3-201ENST00000271850 ARSKQ6UWY0 536 aa8.21□□□□□ -1.1
TPM3-201ENST00000271850 ZDHHC24Q6UX98 284 aa8.21□□□□□ -1.1
TPM3-201ENST00000271850 CYS1Q717R9 158 aa8.21□□□□□ -1.1
TPM3-201ENST00000271850 WDR53Q7Z5U6 358 aaPredicted RBP8.21□□□□□ -1.1
TPM3-201ENST00000271850 KRTAP1-3Q8IUG1 177 aa8.21□□□□□ -1.1
TPM3-201ENST00000271850 ZCCHC7Q8N3Z6 543 aaKnown RBP8.21□□□□□ -1.1
TPM3-201ENST00000271850 OR5L2Q8NGL0 311 aa8.21□□□□□ -1.1
TPM3-201ENST00000271850 NEIL3Q8TAT5 605 aa8.21□□□□□ -1.1
TPM3-201ENST00000271850 NXNL1Q96CM4 212 aa8.21□□□□□ -1.1
TPM3-201ENST00000271850 GPR78Q96P69 363 aa8.21□□□□□ -1.1
TPM3-201ENST00000271850 DGAT2Q96PD7 388 aa8.21□□□□□ -1.1
TPM3-201ENST00000271850 MTERF1Q99551 399 aaKnown RBP8.21□□□□□ -1.1
TPM3-201ENST00000271850 CPNE1Q99829 537 aa8.21□□□□□ -1.1
TPM3-201ENST00000271850 FOXC2Q99958 501 aa8.21□□□□□ -1.1
TPM3-201ENST00000271850 WWTR1Q9GZV5 400 aa8.21□□□□□ -1.1
TPM3-201ENST00000271850 DPH5Q9H2P9 285 aa8.21□□□□□ -1.1
TPM3-201ENST00000271850 GSX1Q9H4S2 264 aaPredicted RBP8.21□□□□□ -1.1
TPM3-201ENST00000271850 RPF2Q9H7B2 306 aaKnown RBP8.21□□□□□ -1.1
TPM3-201ENST00000271850 CNOT10Q9H9A5 744 aaKnown RBP8.21□□□□□ -1.1
TPM3-201ENST00000271850 ACKR4Q9NPB9 350 aa8.21□□□□□ -1.1
TPM3-201ENST00000271850 RASSF1Q9NS23 344 aa8.21□□□□□ -1.1
TPM3-201ENST00000271850 DNAJB12Q9NXW2 375 aaKnown RBP8.21□□□□□ -1.1
TPM3-201ENST00000271850 NSMCE4AQ9NXX6 385 aa8.21□□□□□ -1.1
TPM3-201ENST00000271850 NUDT4Q9NZJ9 180 aa8.21□□□□□ -1.1
TPM3-201ENST00000271850 ST6GALNAC2Q9UJ37 374 aa8.21□□□□□ -1.1
TPM3-201ENST00000271850 ACAD8Q9UKU7 415 aa8.21□□□□□ -1.1
TPM3-201ENST00000271850 CBLCQ9ULV8 474 aa8.21□□□□□ -1.1
TPM3-201ENST00000271850 RNF112Q9ULX5 631 aa8.21□□□□□ -1.1
TPM3-201ENST00000271850 MPDZO75970 2070 aa8.2□□□□□ -1.1
TPM3-201ENST00000271850 A0A1B0GTL3 188 aa8.2□□□□□ -1.1
TPM3-201ENST00000271850 SYNDIG1LA6NDD5 238 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms