RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 TMEM25Q86YD3 366 aa26.08■■□□□ 1.77
CBX4-201ENST00000269397 JPH3Q8WXH2 748 aaPredicted RBP26.08■■□□□ 1.77
CBX4-201ENST00000269397 TM9SF4Q92544 642 aa26.08■■□□□ 1.77
CBX4-201ENST00000269397 MSLNLQ96KJ4 702 aa26.08■■□□□ 1.77
CBX4-201ENST00000269397 LMLNQ96KR4 655 aa26.08■■□□□ 1.77
CBX4-201ENST00000269397 TNFRSF10AO00220 468 aa26.08■■□□□ 1.76
CBX4-201ENST00000269397 FOXE1O00358 373 aaPredicted RBP26.08■■□□□ 1.76
CBX4-201ENST00000269397 HOXA2O43364 376 aa26.08■■□□□ 1.76
CBX4-201ENST00000269397 IL1AP01583 271 aa26.08■■□□□ 1.76
CBX4-201ENST00000269397 SRPRAP08240 638 aaKnown RBP26.08■■□□□ 1.76
CBX4-201ENST00000269397 SYT14P1Q58G82 188 aa26.08■■□□□ 1.76
CBX4-201ENST00000269397 MPP7Q5T2T1 576 aa26.08■■□□□ 1.76
CBX4-201ENST00000269397 ACSM5Q6NUN0 579 aa26.08■■□□□ 1.76
CBX4-201ENST00000269397 BRAT1Q6PJG6 821 aa26.08■■□□□ 1.76
CBX4-201ENST00000269397 PRR23CQ6ZRP0 262 aa26.08■■□□□ 1.76
CBX4-201ENST00000269397 SZRD1Q7Z422 152 aa26.08■■□□□ 1.76
CBX4-201ENST00000269397 TMCO2Q7Z6W1 182 aaPredicted RBP26.08■■□□□ 1.76
CBX4-201ENST00000269397 FAM181AQ8N9Y4 354 aa26.08■■□□□ 1.76
CBX4-201ENST00000269397 NLGN4YQ8NFZ3 816 aaPredicted RBP26.08■■□□□ 1.76
CBX4-201ENST00000269397 OR52P1PQ8NH57 321 aa26.08■■□□□ 1.76
CBX4-201ENST00000269397 OTUB1Q96FW1 271 aaPredicted RBP26.08■■□□□ 1.76
CBX4-201ENST00000269397 ANHXE9PGG2 379 aa26.07■■□□□ 1.76
CBX4-201ENST00000269397 M0R3H8 397 aa26.07■■□□□ 1.76
CBX4-201ENST00000269397 ERVH48-1M5A8F1 160 aa26.07■■□□□ 1.76
CBX4-201ENST00000269397 POLR1CO15160 346 aaPredicted RBP26.07■■□□□ 1.76
CBX4-201ENST00000269397 TP53P04637 393 aaPredicted RBP26.07■■□□□ 1.76
CBX4-201ENST00000269397 CCNYL3P0C7X3 344 aa26.07■■□□□ 1.76
CBX4-201ENST00000269397 MAN2A2P49641 1150 aa26.07■■□□□ 1.76
CBX4-201ENST00000269397 CRTC2Q53ET0 693 aaPredicted RBP26.07■■□□□ 1.76
CBX4-201ENST00000269397 ARSIQ5FYB1 569 aa26.07■■□□□ 1.76
CBX4-201ENST00000269397 IL17FQ96PD4 163 aa26.07■■□□□ 1.76
CBX4-201ENST00000269397 KATNB1Q9BVA0 655 aa26.07■■□□□ 1.76
CBX4-201ENST00000269397 SLA2Q9H6Q3 261 aa26.07■■□□□ 1.76
CBX4-201ENST00000269397 NDOR1Q9UHB4 597 aa26.07■■□□□ 1.76
CBX4-201ENST00000269397 GPSM3Q9Y4H4 160 aa26.07■■□□□ 1.76
CBX4-201ENST00000269397 CLCA3PQ9Y6N3 262 aa26.07■■□□□ 1.76
CBX4-201ENST00000269397 B4GALT2O60909 372 aa26.07■■□□□ 1.76
CBX4-201ENST00000269397 NME6O75414 186 aaPredicted RBP26.07■■□□□ 1.76
CBX4-201ENST00000269397 MANFP55145 182 aaKnown RBP26.07■■□□□ 1.76
CBX4-201ENST00000269397 GPLD1P80108 840 aa26.07■■□□□ 1.76
CBX4-201ENST00000269397 QPRTQ15274 297 aa26.07■■□□□ 1.76
CBX4-201ENST00000269397 ZNF284Q2VY69 593 aa26.07■■□□□ 1.76
CBX4-201ENST00000269397 LIN28BQ6ZN17 250 aaKnown RBP eCLIP26.07■■□□□ 1.76
CBX4-201ENST00000269397 CPXM2Q8N436 756 aa26.07■■□□□ 1.76
CBX4-201ENST00000269397 TRAM1L1Q8N609 369 aa26.07■■□□□ 1.76
CBX4-201ENST00000269397 YIPF7Q8N8F6 280 aa26.07■■□□□ 1.76
CBX4-201ENST00000269397 GLYATL1Q969I3 302 aa26.07■■□□□ 1.76
CBX4-201ENST00000269397 ITM2BQ9Y287 266 aa26.07■■□□□ 1.76
CBX4-201ENST00000269397 THSD7BQ9C0I4 1608 aa26.07■■□□□ 1.76
CBX4-201ENST00000269397 A0A1W2PRU2 124 aa26.06■■□□□ 1.76
CBX4-201ENST00000269397 NEDD8-MDP1E9PL57 170 aa26.06■■□□□ 1.76
CBX4-201ENST00000269397 FAAHO00519 579 aa26.06■■□□□ 1.76
CBX4-201ENST00000269397 TRAPPC2P0DI81 140 aa26.06■■□□□ 1.76
CBX4-201ENST00000269397 TRAPPC2BP0DI82 140 aa26.06■■□□□ 1.76
CBX4-201ENST00000269397 PSKH1P11801 424 aa26.06■■□□□ 1.76
CBX4-201ENST00000269397 CA8P35219 290 aa26.06■■□□□ 1.76
CBX4-201ENST00000269397 GINS1Q14691 196 aa26.06■■□□□ 1.76
CBX4-201ENST00000269397 HIST2H2AA3Q6FI13 130 aa26.06■■□□□ 1.76
CBX4-201ENST00000269397 MRPS31Q92665 395 aaKnown RBP26.06■■□□□ 1.76
CBX4-201ENST00000269397 EFCAB11Q9BUY7 163 aa26.06■■□□□ 1.76
CBX4-201ENST00000269397 CCL26Q9Y258 94 aa26.06■■□□□ 1.76
CBX4-201ENST00000269397 GPR52Q9Y2T5 361 aa26.06■■□□□ 1.76
CBX4-201ENST00000269397 ALPPP05187 535 aa26.06■■□□□ 1.76
CBX4-201ENST00000269397 RPL3P39023 403 aaKnown RBP26.06■■□□□ 1.76
CBX4-201ENST00000269397 PRLHRP49683 370 aa26.06■■□□□ 1.76
CBX4-201ENST00000269397 CHRNEQ04844 493 aa26.06■■□□□ 1.76
CBX4-201ENST00000269397 NFE2L1Q14494 772 aa26.06■■□□□ 1.76
CBX4-201ENST00000269397 LAPTM4BQ86VI4 370 aa26.06■■□□□ 1.76
CBX4-201ENST00000269397 LSRQ86X29 649 aaPredicted RBP26.06■■□□□ 1.76
CBX4-201ENST00000269397 KCTD7Q96MP8 289 aa26.06■■□□□ 1.76
CBX4-201ENST00000269397 GPA33Q99795 319 aa26.06■■□□□ 1.76
CBX4-201ENST00000269397 MCOLN1Q9GZU1 580 aa26.06■■□□□ 1.76
CBX4-201ENST00000269397 IRF2BPLQ9H1B7 796 aa26.06■■□□□ 1.76
CBX4-201ENST00000269397 PLAGL1Q9UM63 463 aa26.06■■□□□ 1.76
CBX4-201ENST00000269397 LEFTY2O00292 366 aa26.05■■□□□ 1.76
CBX4-201ENST00000269397 RAB36O95755 333 aa26.05■■□□□ 1.76
CBX4-201ENST00000269397 CD79BP40259 229 aa26.05■■□□□ 1.76
CBX4-201ENST00000269397 SLC9A3P48764 834 aa26.05■■□□□ 1.76
CBX4-201ENST00000269397 EFR3AQ14156 821 aa26.05■■□□□ 1.76
CBX4-201ENST00000269397 TATDN3Q17R31 274 aa26.05■■□□□ 1.76
CBX4-201ENST00000269397 PODNL1Q6PEZ8 512 aa26.05■■□□□ 1.76
CBX4-201ENST00000269397 KLHDC8AQ8IYD2 350 aa26.05■■□□□ 1.76
CBX4-201ENST00000269397 ZNF366Q8N895 744 aa26.05■■□□□ 1.76
CBX4-201ENST00000269397 GDPD1Q8N9F7 314 aa26.05■■□□□ 1.76
CBX4-201ENST00000269397 TP53I13Q8NBR0 393 aaPredicted RBP26.05■■□□□ 1.76
CBX4-201ENST00000269397 CYB5D2Q8WUJ1 264 aa26.05■■□□□ 1.76
CBX4-201ENST00000269397 SLC5A11Q8WWX8 675 aa26.05■■□□□ 1.76
CBX4-201ENST00000269397 ZSCAN5AQ9BUG6 496 aa26.05■■□□□ 1.76
CBX4-201ENST00000269397 SEC14L3Q9UDX4 400 aa26.05■■□□□ 1.76
CBX4-201ENST00000269397 SOD2P04179 222 aa26.05■■□□□ 1.76
CBX4-201ENST00000269397 CYP2A6P11509 494 aaPredicted RBP26.05■■□□□ 1.76
CBX4-201ENST00000269397 CPEP16870 476 aa26.05■■□□□ 1.76
CBX4-201ENST00000269397 ZNF30P17039 623 aa26.05■■□□□ 1.76
CBX4-201ENST00000269397 E2F2Q14209 437 aa26.05■■□□□ 1.76
CBX4-201ENST00000269397 P2RY14Q15391 338 aa26.05■■□□□ 1.76
CBX4-201ENST00000269397 SPDYE7PQ495Y7 208 aa26.05■■□□□ 1.76
CBX4-201ENST00000269397 DEFB128Q7Z7B8 93 aa26.05■■□□□ 1.76
CBX4-201ENST00000269397 CLDN22Q8N7P3 220 aa26.05■■□□□ 1.76
CBX4-201ENST00000269397 CITED4Q96RK1 184 aa26.05■■□□□ 1.76
CBX4-201ENST00000269397 DIMT1Q9UNQ2 313 aaKnown RBP26.05■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms