RNA–Protein interactions for RNA: ENST00000266079.4

PRPF6-201, Transcript of pre-mRNA processing factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF6, Length 3,044 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF6-201ENST00000266079 OR2L2Q8NH16 312 aa12.01□□□□□ -0.49
PRPF6-201ENST00000266079 ZNF675Q8TD23 568 aa12.01□□□□□ -0.49
PRPF6-201ENST00000266079 NACC2Q96BF6 587 aa12.01□□□□□ -0.49
PRPF6-201ENST00000266079 ZNF514Q96K75 400 aaPredicted RBP12.01□□□□□ -0.49
PRPF6-201ENST00000266079 TRNT1Q96Q11 434 aaKnown RBP12.01□□□□□ -0.49
PRPF6-201ENST00000266079 ROGDIQ9GZN7 287 aa12.01□□□□□ -0.49
PRPF6-201ENST00000266079 SLC17A4Q9Y2C5 497 aa12.01□□□□□ -0.49
PRPF6-201ENST00000266079 SPEF1Q9Y4P9 236 aa12.01□□□□□ -0.49
PRPF6-201ENST00000266079 C12orf71A8MTZ7 269 aa12□□□□□ -0.49
PRPF6-201ENST00000266079 ARHGEF33A8MVX0 844 aa12□□□□□ -0.49
PRPF6-201ENST00000266079 B8ZZF3 427 aa12□□□□□ -0.49
PRPF6-201ENST00000266079 E2F3O00716 465 aa12□□□□□ -0.49
PRPF6-201ENST00000266079 CDK1P06493 297 aa12□□□□□ -0.49
PRPF6-201ENST00000266079 TNFSF8P32971 234 aa12□□□□□ -0.49
PRPF6-201ENST00000266079 GZMMP51124 257 aa12□□□□□ -0.49
PRPF6-201ENST00000266079 SRP54P61011 504 aaKnown RBP12□□□□□ -0.49
PRPF6-201ENST00000266079 ADAMTSL2Q86TH1 951 aa12□□□□□ -0.49
PRPF6-201ENST00000266079 CACTIN-AS1Q8N1I8 211 aa12□□□□□ -0.49
PRPF6-201ENST00000266079 DEPDC4Q8N2C3 294 aa12□□□□□ -0.49
PRPF6-201ENST00000266079 DENND6BQ8NEG7 585 aa12□□□□□ -0.49
PRPF6-201ENST00000266079 OR5AR1Q8NGP9 310 aa12□□□□□ -0.49
PRPF6-201ENST00000266079 PATE1Q8WXA2 126 aa12□□□□□ -0.49
PRPF6-201ENST00000266079 MAP6Q96JE9 813 aa12□□□□□ -0.49
PRPF6-201ENST00000266079 IL17FQ96PD4 163 aa12□□□□□ -0.49
PRPF6-201ENST00000266079 ATP13A2Q9NQ11 1180 aa12□□□□□ -0.49
PRPF6-201ENST00000266079 PLCXD1Q9NUJ7 323 aa12□□□□□ -0.49
PRPF6-201ENST00000266079 KIF17Q9P2E2 1029 aa12□□□□□ -0.49
PRPF6-201ENST00000266079 NUFIP1Q9UHK0 495 aaKnown RBP12□□□□□ -0.49
PRPF6-201ENST00000266079 GPR34Q9UPC5 381 aa12□□□□□ -0.49
PRPF6-201ENST00000266079 A0A075B6Q4 140 aa12□□□□□ -0.49
PRPF6-201ENST00000266079 TRBV5-3A0A0A0MS03 114 aa12□□□□□ -0.49
PRPF6-201ENST00000266079 SLCO2B1O94956 709 aa12□□□□□ -0.49
PRPF6-201ENST00000266079 CD27P26842 260 aa12□□□□□ -0.49
PRPF6-201ENST00000266079 RGS6P49758 472 aa12□□□□□ -0.49
PRPF6-201ENST00000266079 BNC1Q01954 994 aa12□□□□□ -0.49
PRPF6-201ENST00000266079 PTGR1Q14914 329 aa12□□□□□ -0.49
PRPF6-201ENST00000266079 ARMCX4Q5H9R4 360 aa12□□□□□ -0.49
PRPF6-201ENST00000266079 EEF1AKMT2Q5JPI9 291 aaKnown RBP12□□□□□ -0.49
PRPF6-201ENST00000266079 GRAMD2AQ8IUY3 354 aa12□□□□□ -0.49
PRPF6-201ENST00000266079 C10orf111Q8N326 155 aa12□□□□□ -0.49
PRPF6-201ENST00000266079 LSMEM1Q8N8F7 131 aa12□□□□□ -0.49
PRPF6-201ENST00000266079 ATG16L2Q8NAA4 619 aa12□□□□□ -0.49
PRPF6-201ENST00000266079 OR2M4Q96R27 311 aa12□□□□□ -0.49
PRPF6-201ENST00000266079 KCNS3Q9BQ31 491 aa12□□□□□ -0.49
PRPF6-201ENST00000266079 CFL2Q9Y281 166 aa12□□□□□ -0.49
PRPF6-201ENST00000266079 KLK4Q9Y5K2 254 aa12□□□□□ -0.49
PRPF6-201ENST00000266079 EML5Q05BV3 1969 aa12□□□□□ -0.49
PRPF6-201ENST00000266079 E9PQ18 207 aa12□□□□□ -0.49
PRPF6-201ENST00000266079 SLC2A4P14672 509 aa12□□□□□ -0.49
PRPF6-201ENST00000266079 CD9P21926 228 aa12□□□□□ -0.49
PRPF6-201ENST00000266079 TARDBPQ13148 414 aaKnown RBP eCLIP12□□□□□ -0.495e-7■■■■■ 28
PRPF6-201ENST00000266079 COL9A2Q14055 689 aaPredicted RBP12□□□□□ -0.49
PRPF6-201ENST00000266079 PRRT3Q5FWE3 981 aa12□□□□□ -0.49
PRPF6-201ENST00000266079 SPANXN4Q5MJ08 99 aa12□□□□□ -0.49
PRPF6-201ENST00000266079 ABI3BPQ7Z7G0 1075 aa12□□□□□ -0.49
PRPF6-201ENST00000266079 ASB11Q8WXH4 323 aa12□□□□□ -0.49
PRPF6-201ENST00000266079 GGHQ92820 318 aa12□□□□□ -0.49
PRPF6-201ENST00000266079 SNAPC3Q92966 411 aa12□□□□□ -0.49
PRPF6-201ENST00000266079 C12orf66Q96MD2 445 aa12□□□□□ -0.49
PRPF6-201ENST00000266079 IL1RAPQ9NPH3 570 aa12□□□□□ -0.49
PRPF6-201ENST00000266079 DIABLOQ9NR28 239 aa12□□□□□ -0.49
PRPF6-201ENST00000266079 TMEM74BQ9NUR3 256 aa12□□□□□ -0.49
PRPF6-201ENST00000266079 WWOXQ9NZC7 414 aa12□□□□□ -0.49
PRPF6-201ENST00000266079 SAMD4AQ9UPU9 718 aaKnown RBP12□□□□□ -0.49
PRPF6-201ENST00000266079 SNX8Q9Y5X2 465 aa12□□□□□ -0.49
PRPF6-201ENST00000266079 CDK2AP1O14519 115 aa11.99□□□□□ -0.49
PRPF6-201ENST00000266079 TFECO14948 347 aaPredicted RBP11.99□□□□□ -0.49
PRPF6-201ENST00000266079 KPNA5O15131 536 aa11.99□□□□□ -0.49
PRPF6-201ENST00000266079 KIAA0513O60268 411 aa11.99□□□□□ -0.49
PRPF6-201ENST00000266079 CPNE3O75131 537 aaKnown RBP11.99□□□□□ -0.49
PRPF6-201ENST00000266079 ZNF780AO75290 641 aaPredicted RBP11.99□□□□□ -0.49
PRPF6-201ENST00000266079 ZNF682O95780 498 aa11.99□□□□□ -0.49
PRPF6-201ENST00000266079 IL6P05231 212 aa11.99□□□□□ -0.49
PRPF6-201ENST00000266079 PGRP06401 933 aa11.99□□□□□ -0.49
PRPF6-201ENST00000266079 HIST1H2AGP0C0S8 130 aaPredicted RBP11.99□□□□□ -0.49
PRPF6-201ENST00000266079 SLC35G4P0C7Q5 338 aa11.99□□□□□ -0.49
PRPF6-201ENST00000266079 HIST1H2ADP20671 130 aa11.99□□□□□ -0.49
PRPF6-201ENST00000266079 CD38P28907 300 aa11.99□□□□□ -0.49
PRPF6-201ENST00000266079 RABIFP47224 123 aa11.99□□□□□ -0.49
PRPF6-201ENST00000266079 MLIPQ5VWP3 458 aa11.99□□□□□ -0.49
PRPF6-201ENST00000266079 FAAH2Q6GMR7 532 aa11.99□□□□□ -0.49
PRPF6-201ENST00000266079 DNAJC22Q8N4W6 341 aa11.99□□□□□ -0.49
PRPF6-201ENST00000266079 ZFAND1Q8TCF1 268 aa11.99□□□□□ -0.49
PRPF6-201ENST00000266079 TFGQ92734 400 aaPredicted RBP11.99□□□□□ -0.49
PRPF6-201ENST00000266079 MED8Q96G25 268 aa11.99□□□□□ -0.49
PRPF6-201ENST00000266079 HIST1H2AHQ96KK5 128 aa11.99□□□□□ -0.49
PRPF6-201ENST00000266079 HIST1H2AJQ99878 128 aa11.99□□□□□ -0.49
PRPF6-201ENST00000266079 H2AFJQ9BTM1 129 aa11.99□□□□□ -0.49
PRPF6-201ENST00000266079 TBC1D29Q9UFV1 150 aa11.99□□□□□ -0.49
PRPF6-201ENST00000266079 PCDHGA6Q9Y5G7 932 aa11.99□□□□□ -0.49
PRPF6-201ENST00000266079 A0A1W2PQ72 361 aa11.99□□□□□ -0.49
PRPF6-201ENST00000266079 HRO43593 1189 aa11.99□□□□□ -0.49
PRPF6-201ENST00000266079 DIRAS1O95057 198 aa11.99□□□□□ -0.49
PRPF6-201ENST00000266079 ADORA3P0DMS8 318 aa11.99□□□□□ -0.49
PRPF6-201ENST00000266079 KELP23276 732 aa11.99□□□□□ -0.49
PRPF6-201ENST00000266079 RPL38P63173 70 aaKnown RBP11.99□□□□□ -0.49
PRPF6-201ENST00000266079 FZD2Q14332 565 aa11.99□□□□□ -0.49
PRPF6-201ENST00000266079 IDO2Q6ZQW0 420 aa11.99□□□□□ -0.49
PRPF6-201ENST00000266079 DTWD2Q8NBA8 298 aa11.99□□□□□ -0.49
PRPF6-201ENST00000266079 GLB1L3Q8NCI6 653 aaPredicted RBP11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms