RNA–Protein interactions for RNA: ENST00000265745.13

VPS41-201, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-201ENST00000265745 SLC22A16Q86VW1 577 aa8.99□□□□□ -0.97
VPS41-201ENST00000265745 C9orf40Q8IXQ3 194 aa8.99□□□□□ -0.97
VPS41-201ENST00000265745 ST13P4Q8IZP2 240 aaPredicted RBP8.99□□□□□ -0.97
VPS41-201ENST00000265745 MARVELD2Q8N4S9 558 aa8.99□□□□□ -0.97
VPS41-201ENST00000265745 MMGT1Q8N4V1 131 aa8.99□□□□□ -0.97
VPS41-201ENST00000265745 ACBD4Q8NC06 268 aa8.99□□□□□ -0.97
VPS41-201ENST00000265745 WDR20Q8TBZ3 569 aa8.99□□□□□ -0.97
VPS41-201ENST00000265745 ISL2Q96A47 359 aa8.99□□□□□ -0.97
VPS41-201ENST00000265745 SDCCAG3Q96C92 435 aa8.99□□□□□ -0.97
VPS41-201ENST00000265745 FBXL20Q96IG2 436 aa8.99□□□□□ -0.97
VPS41-201ENST00000265745 DGAT2Q96PD7 388 aa8.99□□□□□ -0.97
VPS41-201ENST00000265745 FAM173AQ9BQD7 235 aa8.99□□□□□ -0.97
VPS41-201ENST00000265745 TTTY12Q9BZ98 90 aa8.99□□□□□ -0.97
VPS41-201ENST00000265745 TRIM8Q9BZR9 551 aa8.99□□□□□ -0.97
VPS41-201ENST00000265745 TSPYL1Q9H0U9 437 aa8.99□□□□□ -0.97
VPS41-201ENST00000265745 VPS11Q9H270 941 aa8.99□□□□□ -0.97
VPS41-201ENST00000265745 NOL11Q9H8H0 719 aaKnown RBP8.99□□□□□ -0.97
VPS41-201ENST00000265745 IL1RL2Q9HB29 575 aa8.99□□□□□ -0.97
VPS41-201ENST00000265745 SH2D2AQ9NP31 389 aa8.99□□□□□ -0.97
VPS41-201ENST00000265745 CPSF2Q9P2I0 782 aaKnown RBP8.99□□□□□ -0.97
VPS41-201ENST00000265745 COPS7AQ9UBW8 275 aa8.99□□□□□ -0.97
VPS41-201ENST00000265745 MTRF1LQ9UGC7 380 aaKnown RBP8.99□□□□□ -0.97
VPS41-201ENST00000265745 DMGDHQ9UI17 866 aaKnown RBP8.99□□□□□ -0.97
VPS41-201ENST00000265745 PHF11Q9UIL8 331 aa8.99□□□□□ -0.97
VPS41-201ENST00000265745 PCNX1Q96RV3 2341 aa8.99□□□□□ -0.97
VPS41-201ENST00000265745 IQANK1A0A1B0GTG1 560 aa8.98□□□□□ -0.97
VPS41-201ENST00000265745 A0A1B0GVC2 190 aa8.98□□□□□ -0.97
VPS41-201ENST00000265745 GLOD5A6NK44 160 aa8.98□□□□□ -0.97
VPS41-201ENST00000265745 FAM166BA8MTA8 275 aa8.98□□□□□ -0.97
VPS41-201ENST00000265745 ACOT7O00154 380 aa8.98□□□□□ -0.97
VPS41-201ENST00000265745 OR7A17O14581 309 aa8.98□□□□□ -0.97
VPS41-201ENST00000265745 DYRK3O43781 588 aa8.98□□□□□ -0.97
VPS41-201ENST00000265745 CLDN9O95484 217 aa8.98□□□□□ -0.97
VPS41-201ENST00000265745 NADKO95544 446 aaPredicted RBP8.98□□□□□ -0.97
VPS41-201ENST00000265745 ACSL3O95573 720 aa8.98□□□□□ -0.97
VPS41-201ENST00000265745 IGHG3P01860 377 aa8.98□□□□□ -0.97
VPS41-201ENST00000265745 FAM58BPP0C7Q3 252 aa8.98□□□□□ -0.97
VPS41-201ENST00000265745 CCL3P10147 92 aa8.98□□□□□ -0.97
VPS41-201ENST00000265745 ALOX15P16050 662 aaPredicted RBP8.98□□□□□ -0.97
VPS41-201ENST00000265745 BUD31P41223 144 aaPredicted RBP8.98□□□□□ -0.97
VPS41-201ENST00000265745 PHEXP78562 749 aa8.98□□□□□ -0.97
VPS41-201ENST00000265745 PLIN5Q00G26 463 aa8.98□□□□□ -0.97
VPS41-201ENST00000265745 ZNF267Q14586 743 aaPredicted RBP8.98□□□□□ -0.97
VPS41-201ENST00000265745 GXYLT1Q4G148 440 aa8.98□□□□□ -0.97
VPS41-201ENST00000265745 SLC22A10Q63ZE4 541 aa8.98□□□□□ -0.97
VPS41-201ENST00000265745 TMEM211Q6ICI0 200 aa8.98□□□□□ -0.97
VPS41-201ENST00000265745 GK5Q6ZS86 529 aa8.98□□□□□ -0.97
VPS41-201ENST00000265745 MEIOBQ8N635 442 aa8.98□□□□□ -0.97
VPS41-201ENST00000265745 SLC15A4Q8N697 577 aa8.98□□□□□ -0.97
VPS41-201ENST00000265745 PTGR2Q8N8N7 351 aaPredicted RBP8.98□□□□□ -0.97
VPS41-201ENST00000265745 NOA1Q8NC60 698 aaKnown RBP8.98□□□□□ -0.97
VPS41-201ENST00000265745 OR52B6Q8NGF0 335 aa8.98□□□□□ -0.97
VPS41-201ENST00000265745 DOK4Q8TEW6 326 aa8.98□□□□□ -0.97
VPS41-201ENST00000265745 CA5BP1Q8WTZ4 195 aa8.98□□□□□ -0.97
VPS41-201ENST00000265745 RIT1Q92963 219 aa8.98□□□□□ -0.97
VPS41-201ENST00000265745 UCN3Q969E3 161 aa8.98□□□□□ -0.97
VPS41-201ENST00000265745 PHF21BQ96EK2 531 aa8.98□□□□□ -0.97
VPS41-201ENST00000265745 ART5Q96L15 291 aa8.98□□□□□ -0.97
VPS41-201ENST00000265745 C16orf45Q96MC5 204 aaPredicted RBP8.98□□□□□ -0.97
VPS41-201ENST00000265745 SPOCK3Q9BQ16 436 aa8.98□□□□□ -0.97
VPS41-201ENST00000265745 NTMT1Q9BV86 223 aa8.98□□□□□ -0.97
VPS41-201ENST00000265745 TP63Q9H3D4 680 aaPredicted RBP8.98□□□□□ -0.97
VPS41-201ENST00000265745 CDC42EP4Q9H3Q1 356 aaKnown RBP8.98□□□□□ -0.97
VPS41-201ENST00000265745 SACM1LQ9NTJ5 587 aa8.98□□□□□ -0.97
VPS41-201ENST00000265745 LYARQ9NX58 379 aaKnown RBP8.98□□□□□ -0.97
VPS41-201ENST00000265745 PKDREJQ9NTG1 2253 aa8.98□□□□□ -0.97
VPS41-201ENST00000265745 FBN2P35556 2912 aa8.98□□□□□ -0.97
VPS41-201ENST00000265745 APCP25054 2843 aa8.97□□□□□ -0.97
VPS41-201ENST00000265745 OR14I1A6ND48 311 aa8.97□□□□□ -0.97
VPS41-201ENST00000265745 NPIPA2E9PIF3 369 aa8.97□□□□□ -0.97
VPS41-201ENST00000265745 NPIPA3F8WFD2 350 aa8.97□□□□□ -0.97
VPS41-201ENST00000265745 STX16-NPEPL1H3BU86 382 aa8.97□□□□□ -0.97
VPS41-201ENST00000265745 STX16O14662 325 aa8.97□□□□□ -0.97
VPS41-201ENST00000265745 PGRMC2O15173 223 aa8.97□□□□□ -0.97
VPS41-201ENST00000265745 OR10H2O60403 315 aa8.97□□□□□ -0.97
VPS41-201ENST00000265745 SEMA3DO95025 777 aa8.97□□□□□ -0.97
VPS41-201ENST00000265745 AIFM1O95831 613 aa8.97□□□□□ -0.97
VPS41-201ENST00000265745 GBAP04062 536 aa8.97□□□□□ -0.97
VPS41-201ENST00000265745 P04436 131 aa8.97□□□□□ -0.97
VPS41-201ENST00000265745 INHBAP08476 426 aa8.97□□□□□ -0.97
VPS41-201ENST00000265745 SLC35E2P0CK97 266 aa8.97□□□□□ -0.97
VPS41-201ENST00000265745 NR2F6P10588 404 aa8.97□□□□□ -0.97
VPS41-201ENST00000265745 COL6A2P12110 1019 aa8.97□□□□□ -0.97
VPS41-201ENST00000265745 ECHS1P30084 290 aa8.97□□□□□ -0.97
VPS41-201ENST00000265745 GALNSP34059 522 aa8.97□□□□□ -0.97
VPS41-201ENST00000265745 PIGAP37287 484 aa8.97□□□□□ -0.97
VPS41-201ENST00000265745 MAGEA5P43359 124 aa8.97□□□□□ -0.97
VPS41-201ENST00000265745 DNASE1L1P49184 302 aa8.97□□□□□ -0.97
VPS41-201ENST00000265745 SERPINB9P50453 376 aa8.97□□□□□ -0.97
VPS41-201ENST00000265745 RNF144AP50876 292 aaPredicted RBP8.97□□□□□ -0.97
VPS41-201ENST00000265745 HERVK_113P63132 956 aa8.97□□□□□ -0.97
VPS41-201ENST00000265745 ERVK-8P63133 956 aa8.97□□□□□ -0.97
VPS41-201ENST00000265745 PMPCAQ10713 525 aa8.97□□□□□ -0.97
VPS41-201ENST00000265745 SLC10A1Q14973 349 aa8.97□□□□□ -0.97
VPS41-201ENST00000265745 SPRED3Q2MJR0 410 aa8.97□□□□□ -0.97
VPS41-201ENST00000265745 C10orf62Q5T681 223 aaPredicted RBP8.97□□□□□ -0.97
VPS41-201ENST00000265745 FRG2Q64ET8 278 aa8.97□□□□□ -0.97
VPS41-201ENST00000265745 CYP20A1Q6UW02 462 aa8.97□□□□□ -0.97
VPS41-201ENST00000265745 FAM47EQ6ZV65 393 aa8.97□□□□□ -0.97
VPS41-201ENST00000265745 TRILQ7L0X0 811 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms