RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 FER1L6-AS2Q96M78 137 aa17.14■□□□□ 0.33
SDF4-201ENST00000263741 LPAR4Q99677 370 aa17.14■□□□□ 0.33
SDF4-201ENST00000263741 EBF4Q9BQW3 602 aa17.14■□□□□ 0.33
SDF4-201ENST00000263741 BLACEA4D250 179 aa17.13■□□□□ 0.33
SDF4-201ENST00000263741 TRPC5OSA6NMA1 111 aa17.13■□□□□ 0.33
SDF4-201ENST00000263741 ALDOCP09972 364 aaKnown RBP17.13■□□□□ 0.33
SDF4-201ENST00000263741 G6PDP11413 515 aa17.13■□□□□ 0.33
SDF4-201ENST00000263741 ITGA3P26006 1051 aa17.13■□□□□ 0.33
SDF4-201ENST00000263741 LINC00303Q3SY05 128 aa17.13■□□□□ 0.33
SDF4-201ENST00000263741 TMEM102Q8N9M5 508 aaPredicted RBP17.13■□□□□ 0.33
SDF4-201ENST00000263741 OR4K14Q8NGD5 310 aa17.13■□□□□ 0.33
SDF4-201ENST00000263741 CNRIP1Q96F85 164 aaPredicted RBP17.13■□□□□ 0.33
SDF4-201ENST00000263741 ANKRD27Q96NW4 1050 aa17.13■□□□□ 0.33
SDF4-201ENST00000263741 DGAT2Q96PD7 388 aa17.13■□□□□ 0.33
SDF4-201ENST00000263741 ADAP2Q9NPF8 381 aa17.13■□□□□ 0.33
SDF4-201ENST00000263741 MIEF1Q9NQG6 463 aa17.13■□□□□ 0.33
SDF4-201ENST00000263741 TLN1Q9Y490 2541 aaKnown RBP17.13■□□□□ 0.33
SDF4-201ENST00000263741 SAGE2PA6NJ88 616 aa17.12■□□□□ 0.33
SDF4-201ENST00000263741 C17orf105B2RV13 164 aa17.12■□□□□ 0.33
SDF4-201ENST00000263741 SLCO1B7G3V0H7 640 aa17.12■□□□□ 0.33
SDF4-201ENST00000263741 HRKO00198 91 aa17.12■□□□□ 0.33
SDF4-201ENST00000263741 ANP32DO95626 131 aa17.12■□□□□ 0.33
SDF4-201ENST00000263741 XKP51811 444 aa17.12■□□□□ 0.33
SDF4-201ENST00000263741 PGDP52209 483 aa17.12■□□□□ 0.33
SDF4-201ENST00000263741 CLNS1AP54105 237 aaKnown RBP17.12■□□□□ 0.33
SDF4-201ENST00000263741 RRADP55042 308 aa17.12■□□□□ 0.33
SDF4-201ENST00000263741 POLE2P56282 527 aa17.12■□□□□ 0.33
SDF4-201ENST00000263741 SLC26A5P58743 744 aa17.12■□□□□ 0.33
SDF4-201ENST00000263741 ERVK-8P63133 956 aa17.12■□□□□ 0.33
SDF4-201ENST00000263741 HEPACAMQ14CZ8 416 aa17.12■□□□□ 0.33
SDF4-201ENST00000263741 TMEM198Q66K66 360 aa17.12■□□□□ 0.33
SDF4-201ENST00000263741 KRTCAP2Q8N6L1 136 aa17.12■□□□□ 0.33
SDF4-201ENST00000263741 ZNF321PQ8N8H1 164 aa17.12■□□□□ 0.33
SDF4-201ENST00000263741 TTC9Q92623 222 aa17.12■□□□□ 0.33
SDF4-201ENST00000263741 TUBB6Q9BUF5 446 aa17.12■□□□□ 0.33
SDF4-201ENST00000263741 NPHS2Q9NP85 383 aa17.12■□□□□ 0.33
SDF4-201ENST00000263741 G3BP2Q9UN86 482 aaKnown RBP17.12■□□□□ 0.33
SDF4-201ENST00000263741 LHX6Q9UPM6 363 aa17.12■□□□□ 0.33
SDF4-201ENST00000263741 OR10H2O60403 315 aa17.12■□□□□ 0.33
SDF4-201ENST00000263741 ITGAMP11215 1152 aa17.12■□□□□ 0.33
SDF4-201ENST00000263741 ALOX15P16050 662 aaPredicted RBP17.12■□□□□ 0.33
SDF4-201ENST00000263741 LBPP18428 481 aa17.12■□□□□ 0.33
SDF4-201ENST00000263741 TNNI3P19429 210 aa17.12■□□□□ 0.33
SDF4-201ENST00000263741 DDCP20711 480 aa17.12■□□□□ 0.33
SDF4-201ENST00000263741 STT3AP46977 705 aa17.12■□□□□ 0.33
SDF4-201ENST00000263741 AQP5P55064 265 aa17.12■□□□□ 0.33
SDF4-201ENST00000263741 NME5P56597 212 aa17.12■□□□□ 0.33
SDF4-201ENST00000263741 PLIN5Q00G26 463 aa17.12■□□□□ 0.33
SDF4-201ENST00000263741 EMX2Q04743 252 aa17.12■□□□□ 0.33
SDF4-201ENST00000263741 SERTAD2Q14140 314 aa17.12■□□□□ 0.33
SDF4-201ENST00000263741 ELAVL1Q15717 326 aaKnown RBP17.12■□□□□ 0.33
SDF4-201ENST00000263741 LTB4RQ15722 352 aa17.12■□□□□ 0.33
SDF4-201ENST00000263741 ZNF385BQ569K4 471 aa17.12■□□□□ 0.33
SDF4-201ENST00000263741 FDCSPQ8NFU4 85 aa17.12■□□□□ 0.33
SDF4-201ENST00000263741 RFWD2Q8NHY2 731 aa17.12■□□□□ 0.33
SDF4-201ENST00000263741 PTPMT1Q8WUK0 201 aaPredicted RBP17.12■□□□□ 0.33
SDF4-201ENST00000263741 THOC3Q96J01 351 aaKnown RBP17.12■□□□□ 0.33
SDF4-201ENST00000263741 ATP13A2Q9NQ11 1180 aa17.12■□□□□ 0.33
SDF4-201ENST00000263741 SAR1AQ9NR31 198 aa17.12■□□□□ 0.33
SDF4-201ENST00000263741 DCTN4Q9UJW0 460 aa17.12■□□□□ 0.33
SDF4-201ENST00000263741 PCDH17O14917 1159 aa17.11■□□□□ 0.33
SDF4-201ENST00000263741 ITGB2P05107 769 aa17.11■□□□□ 0.33
SDF4-201ENST00000263741 CPMP14384 443 aa17.11■□□□□ 0.33
SDF4-201ENST00000263741 DRD2P14416 443 aa17.11■□□□□ 0.33
SDF4-201ENST00000263741 EFNA1P20827 205 aaPredicted RBP17.11■□□□□ 0.33
SDF4-201ENST00000263741 MAPK1P28482 360 aa17.11■□□□□ 0.33
SDF4-201ENST00000263741 AIMP2Q13155 320 aaKnown RBP17.11■□□□□ 0.33
SDF4-201ENST00000263741 APLFQ8IW19 511 aaPredicted RBP17.11■□□□□ 0.33
SDF4-201ENST00000263741 GALNT16Q8N428 558 aa17.11■□□□□ 0.33
SDF4-201ENST00000263741 SIRT6Q8N6T7 355 aa17.11■□□□□ 0.33
SDF4-201ENST00000263741 MAELQ96JY0 434 aaKnown RBP17.11■□□□□ 0.33
SDF4-201ENST00000263741 OR8D2Q9GZM6 311 aa17.11■□□□□ 0.33
SDF4-201ENST00000263741 TRIM33Q9UPN9 1127 aa17.11■□□□□ 0.33
SDF4-201ENST00000263741 EIF3LQ9Y262 564 aaKnown RBP17.11■□□□□ 0.33
SDF4-201ENST00000263741 CLCA3PQ9Y6N3 262 aa17.11■□□□□ 0.33
SDF4-201ENST00000263741 IDH3AP50213 366 aa17.11■□□□□ 0.33
SDF4-201ENST00000263741 ST13P50502 369 aaKnown RBP17.11■□□□□ 0.33
SDF4-201ENST00000263741 EPGNQ6UW88 154 aa17.11■□□□□ 0.33
SDF4-201ENST00000263741 IKBIPQ70UQ0 350 aa17.11■□□□□ 0.33
SDF4-201ENST00000263741 ST13P4Q8IZP2 240 aaPredicted RBP17.11■□□□□ 0.33
SDF4-201ENST00000263741 NFAM1Q8NET5 270 aaPredicted RBP17.11■□□□□ 0.33
SDF4-201ENST00000263741 ADCY4Q8NFM4 1077 aa17.11■□□□□ 0.33
SDF4-201ENST00000263741 BRIX1Q8TDN6 353 aaKnown RBP17.11■□□□□ 0.33
SDF4-201ENST00000263741 CIDECQ96AQ7 238 aaPredicted RBP17.11■□□□□ 0.33
SDF4-201ENST00000263741 VPS50Q96JG6 964 aa17.11■□□□□ 0.33
SDF4-201ENST00000263741 ARHGAP9Q9BRR9 750 aa17.11■□□□□ 0.33
SDF4-201ENST00000263741 CNPPD1Q9BV87 410 aa17.11■□□□□ 0.33
SDF4-201ENST00000263741 NUDT9Q9BW91 350 aa17.11■□□□□ 0.33
SDF4-201ENST00000263741 GPR83Q9NYM4 423 aa17.11■□□□□ 0.33
SDF4-201ENST00000263741 CHD6Q8TD26 2715 aa17.1■□□□□ 0.33
SDF4-201ENST00000263741 C9JVG2 144 aa17.1■□□□□ 0.33
SDF4-201ENST00000263741 K7EM74 188 aa17.1■□□□□ 0.33
SDF4-201ENST00000263741 CT62P0C5K7 136 aa17.1■□□□□ 0.33
SDF4-201ENST00000263741 NT5EP21589 574 aa17.1■□□□□ 0.33
SDF4-201ENST00000263741 LSM12Q3MHD2 195 aaKnown RBP17.1■□□□□ 0.33
SDF4-201ENST00000263741 FCRLBQ6BAA4 426 aa17.1■□□□□ 0.33
SDF4-201ENST00000263741 PLAG1Q6DJT9 500 aa17.1■□□□□ 0.33
SDF4-201ENST00000263741 OR7A2PQ8NGA2 310 aa17.1■□□□□ 0.33
SDF4-201ENST00000263741 NCLNQ969V3 563 aa17.1■□□□□ 0.33
SDF4-201ENST00000263741 RBM18Q96H35 190 aaKnown RBP17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms