RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 SCELO95171 688 aa11.29□□□□□ -0.6
TRAF4-202ENST00000262396 LRATO95237 230 aa11.29□□□□□ -0.6
TRAF4-202ENST00000262396 CLDN9O95484 217 aa11.29□□□□□ -0.6
TRAF4-202ENST00000262396 IGHG3P01860 377 aa11.29□□□□□ -0.6
TRAF4-202ENST00000262396 C2P06681 752 aa11.29□□□□□ -0.6
TRAF4-202ENST00000262396 CELA3AP09093 270 aa11.29□□□□□ -0.6
TRAF4-202ENST00000262396 GLI4P10075 376 aa11.29□□□□□ -0.6
TRAF4-202ENST00000262396 CD1EP15812 388 aa11.29□□□□□ -0.6
TRAF4-202ENST00000262396 EPORP19235 508 aa11.29□□□□□ -0.6
TRAF4-202ENST00000262396 NT5EP21589 574 aa11.29□□□□□ -0.6
TRAF4-202ENST00000262396 UQCRC1P31930 480 aa11.29□□□□□ -0.6
TRAF4-202ENST00000262396 NR0B1P51843 470 aaKnown RBP11.29□□□□□ -0.6
TRAF4-202ENST00000262396 IRF9Q00978 393 aa11.29□□□□□ -0.6
TRAF4-202ENST00000262396 CKAP4Q07065 602 aaKnown RBP11.29□□□□□ -0.6
TRAF4-202ENST00000262396 DLG1Q12959 904 aa11.29□□□□□ -0.6
TRAF4-202ENST00000262396 SETDB1Q15047 1291 aa11.29□□□□□ -0.6
TRAF4-202ENST00000262396 SLC25A35Q3KQZ1 300 aa11.29□□□□□ -0.6
TRAF4-202ENST00000262396 EMC4Q5J8M3 183 aa11.29□□□□□ -0.6
TRAF4-202ENST00000262396 TBCELQ5QJ74 424 aa11.29□□□□□ -0.6
TRAF4-202ENST00000262396 OR52E8Q6IFG1 317 aa11.29□□□□□ -0.6
TRAF4-202ENST00000262396 C8orf74Q6P047 294 aa11.29□□□□□ -0.6
TRAF4-202ENST00000262396 PAGE2Q7Z2X7 111 aa11.29□□□□□ -0.6
TRAF4-202ENST00000262396 GOLGA7Q7Z5G4 137 aa11.29□□□□□ -0.6
TRAF4-202ENST00000262396 PACS2Q86VP3 889 aa11.29□□□□□ -0.6
TRAF4-202ENST00000262396 C9orf40Q8IXQ3 194 aa11.29□□□□□ -0.6
TRAF4-202ENST00000262396 DMRTC2Q8IXT2 367 aaPredicted RBP11.29□□□□□ -0.6
TRAF4-202ENST00000262396 FBXW8Q8N3Y1 598 aa11.29□□□□□ -0.6
TRAF4-202ENST00000262396 OR10G3Q8NGC4 313 aa11.29□□□□□ -0.6
TRAF4-202ENST00000262396 RHEBL1Q8TAI7 183 aa11.29□□□□□ -0.6
TRAF4-202ENST00000262396 SERPINI1Q99574 410 aa11.29□□□□□ -0.6
TRAF4-202ENST00000262396 WWTR1Q9GZV5 400 aa11.29□□□□□ -0.6
TRAF4-202ENST00000262396 SNX15Q9NRS6 342 aa11.29□□□□□ -0.6
TRAF4-202ENST00000262396 IGSF5Q9NSI5 407 aa11.29□□□□□ -0.6
TRAF4-202ENST00000262396 GRHL1Q9NZI5 618 aa11.29□□□□□ -0.6
TRAF4-202ENST00000262396 MTRF1LQ9UGC7 380 aaKnown RBP11.29□□□□□ -0.6
TRAF4-202ENST00000262396 A0A1B0GVC2 190 aa11.28□□□□□ -0.6
TRAF4-202ENST00000262396 HSPB2A8KAH6 182 aa11.28□□□□□ -0.6
TRAF4-202ENST00000262396 DVL2O14641 736 aa11.28□□□□□ -0.6
TRAF4-202ENST00000262396 PROM1O43490 865 aa11.28□□□□□ -0.6
TRAF4-202ENST00000262396 KLK8O60259 260 aa11.28□□□□□ -0.6
TRAF4-202ENST00000262396 UGDHO60701 494 aa11.28□□□□□ -0.6
TRAF4-202ENST00000262396 KLHL2O95198 593 aa11.28□□□□□ -0.6
TRAF4-202ENST00000262396 NADKO95544 446 aaPredicted RBP11.28□□□□□ -0.6
TRAF4-202ENST00000262396 GBAP04062 536 aa11.28□□□□□ -0.6
TRAF4-202ENST00000262396 INHBAP08476 426 aa11.28□□□□□ -0.6
TRAF4-202ENST00000262396 KIR2DL3P43628 341 aa11.28□□□□□ -0.6
TRAF4-202ENST00000262396 NEK2P51955 445 aa11.28□□□□□ -0.6
TRAF4-202ENST00000262396 ART1P52961 327 aa11.28□□□□□ -0.6
TRAF4-202ENST00000262396 ARFIP1P53367 373 aa11.28□□□□□ -0.6
TRAF4-202ENST00000262396 HNRNPH2P55795 449 aaKnown RBP11.28□□□□□ -0.6
TRAF4-202ENST00000262396 CBLBQ13191 982 aa11.28□□□□□ -0.6
TRAF4-202ENST00000262396 CUL3Q13618 768 aa11.28□□□□□ -0.6
TRAF4-202ENST00000262396 HSPB2Q16082 182 aa11.28□□□□□ -0.6
TRAF4-202ENST00000262396 ZNF791Q3KP31 576 aaPredicted RBP11.28□□□□□ -0.6
TRAF4-202ENST00000262396 SGO1Q5FBB7 561 aa11.28□□□□□ -0.6
TRAF4-202ENST00000262396 CCNYL2Q5T2Q4 361 aa11.28□□□□□ -0.6
TRAF4-202ENST00000262396 GALNT12Q8IXK2 581 aa11.28□□□□□ -0.6
TRAF4-202ENST00000262396 OR4K14Q8NGD5 310 aa11.28□□□□□ -0.6
TRAF4-202ENST00000262396 GOT1L1Q8NHS2 421 aaPredicted RBP11.28□□□□□ -0.6
TRAF4-202ENST00000262396 PAQR8Q8TEZ7 354 aa11.28□□□□□ -0.6
TRAF4-202ENST00000262396 PHF21BQ96EK2 531 aa11.28□□□□□ -0.6
TRAF4-202ENST00000262396 SLC6A15Q9H2J7 730 aa11.28□□□□□ -0.6
TRAF4-202ENST00000262396 ELOVL6Q9H5J4 265 aa11.28□□□□□ -0.6
TRAF4-202ENST00000262396 NOL11Q9H8H0 719 aaKnown RBP11.28□□□□□ -0.6
TRAF4-202ENST00000262396 SEMA4BQ9NPR2 832 aaPredicted RBP11.28□□□□□ -0.6
TRAF4-202ENST00000262396 PFDN4Q9NQP4 134 aa11.28□□□□□ -0.6
TRAF4-202ENST00000262396 NPDC1Q9NQX5 325 aaPredicted RBP11.28□□□□□ -0.6
TRAF4-202ENST00000262396 RYDENQ9NUL5 291 aaKnown RBP11.28□□□□□ -0.6
TRAF4-202ENST00000262396 DNAJB12Q9NXW2 375 aaKnown RBP11.28□□□□□ -0.6
TRAF4-202ENST00000262396 RNF11Q9Y3C5 154 aa11.28□□□□□ -0.6
TRAF4-202ENST00000262396 NCOA6Q14686 2063 aaPredicted RBP11.28□□□□□ -0.6
TRAF4-202ENST00000262396 A0A0G2JNJ9 132 aa11.27□□□□□ -0.61
TRAF4-202ENST00000262396 H0YIV9 168 aa11.27□□□□□ -0.61
TRAF4-202ENST00000262396 HRKO00198 91 aa11.27□□□□□ -0.61
TRAF4-202ENST00000262396 ZNF354AO60765 605 aaPredicted RBP11.27□□□□□ -0.61
TRAF4-202ENST00000262396 EEDO75530 441 aaKnown RBP11.27□□□□□ -0.61
TRAF4-202ENST00000262396 ESRRBO95718 433 aa11.27□□□□□ -0.61
TRAF4-202ENST00000262396 AIFM1O95831 613 aa11.27□□□□□ -0.61
TRAF4-202ENST00000262396 IL2RAP01589 272 aa11.27□□□□□ -0.61
TRAF4-202ENST00000262396 IGKV3-11P04433 115 aa11.27□□□□□ -0.61
TRAF4-202ENST00000262396 RBP1P09455 135 aa11.27□□□□□ -0.61
TRAF4-202ENST00000262396 FBXO45P0C2W1 286 aa11.27□□□□□ -0.61
TRAF4-202ENST00000262396 SLC35E2P0CK97 266 aa11.27□□□□□ -0.61
TRAF4-202ENST00000262396 BMP5P22003 454 aa11.27□□□□□ -0.61
TRAF4-202ENST00000262396 PEX19P40855 299 aa11.27□□□□□ -0.61
TRAF4-202ENST00000262396 IGLV3-21P80748 117 aaPredicted RBP11.27□□□□□ -0.61
TRAF4-202ENST00000262396 SLC7A5Q01650 507 aa11.27□□□□□ -0.61
TRAF4-202ENST00000262396 FOXO1Q12778 655 aa11.27□□□□□ -0.61
TRAF4-202ENST00000262396 HYAL4Q2M3T9 481 aa11.27□□□□□ -0.61
TRAF4-202ENST00000262396 SPRED3Q2MJR0 410 aa11.27□□□□□ -0.61
TRAF4-202ENST00000262396 RIPPLY2Q5TAB7 128 aa11.27□□□□□ -0.61
TRAF4-202ENST00000262396 ARSKQ6UWY0 536 aa11.27□□□□□ -0.61
TRAF4-202ENST00000262396 SYT10Q6XYQ8 523 aa11.27□□□□□ -0.61
TRAF4-202ENST00000262396 DGAT2L6Q6ZPD8 337 aa11.27□□□□□ -0.61
TRAF4-202ENST00000262396 PM20D2Q8IYS1 436 aa11.27□□□□□ -0.61
TRAF4-202ENST00000262396 PTGR2Q8N8N7 351 aaPredicted RBP11.27□□□□□ -0.61
TRAF4-202ENST00000262396 NEIL3Q8TAT5 605 aa11.27□□□□□ -0.61
TRAF4-202ENST00000262396 POLDIP3Q9BY77 421 aaKnown RBP11.27□□□□□ -0.61
TRAF4-202ENST00000262396 BRINP2Q9C0B6 783 aa11.27□□□□□ -0.61
TRAF4-202ENST00000262396 ZNF703Q9H7S9 590 aaPredicted RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms