RNA–Protein interactions for RNA: ENST00000262213.6

TRAM1-201, Transcript of translocation associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAM1, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-201ENST00000262213 PPIL1Q9Y3C6 166 aa16.57■□□□□ 0.24
TRAM1-201ENST00000262213 FAM25AB3EWG3 89 aa16.57■□□□□ 0.24
TRAM1-201ENST00000262213 FAM25CB3EWG5 89 aa16.57■□□□□ 0.24
TRAM1-201ENST00000262213 FAM25GB3EWG6 89 aa16.57■□□□□ 0.24
TRAM1-201ENST00000262213 AKR7A2O43488 359 aa16.57■□□□□ 0.24
TRAM1-201ENST00000262213 C1GALT1C1LP0DN25 315 aa16.57■□□□□ 0.24
TRAM1-201ENST00000262213 ITGB7P26010 798 aa16.57■□□□□ 0.24
TRAM1-201ENST00000262213 PTGER1P34995 402 aa16.57■□□□□ 0.24
TRAM1-201ENST00000262213 MANFP55145 182 aaKnown RBP16.57■□□□□ 0.24
TRAM1-201ENST00000262213 PDE7AQ13946 482 aa16.57■□□□□ 0.24
TRAM1-201ENST00000262213 EFR3AQ14156 821 aa16.57■□□□□ 0.24
TRAM1-201ENST00000262213 E2F2Q14209 437 aa16.57■□□□□ 0.24
TRAM1-201ENST00000262213 GINS1Q14691 196 aa16.57■□□□□ 0.24
TRAM1-201ENST00000262213 TATDN3Q17R31 274 aa16.57■□□□□ 0.24
TRAM1-201ENST00000262213 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.57■□□□□ 0.246e-7■■□□□ 12.8
TRAM1-201ENST00000262213 ZDHHC20Q5W0Z9 365 aa16.57■□□□□ 0.24
TRAM1-201ENST00000262213 C12orf73Q69YU5 71 aa16.57■□□□□ 0.24
TRAM1-201ENST00000262213 HIST2H2AA3Q6FI13 130 aa16.57■□□□□ 0.24
TRAM1-201ENST00000262213 RDH10Q8IZV5 341 aa16.57■□□□□ 0.24
TRAM1-201ENST00000262213 ZNF366Q8N895 744 aa16.57■□□□□ 0.24
TRAM1-201ENST00000262213 TMEM169Q96HH4 297 aa16.57■□□□□ 0.24
TRAM1-201ENST00000262213 IGSF21Q96ID5 467 aa16.57■□□□□ 0.24
TRAM1-201ENST00000262213 KCTD7Q96MP8 289 aa16.57■□□□□ 0.24
TRAM1-201ENST00000262213 ANHXE9PGG2 379 aa16.56■□□□□ 0.24
TRAM1-201ENST00000262213 POLR1CO15160 346 aaPredicted RBP16.56■□□□□ 0.24
TRAM1-201ENST00000262213 POLR2EP19388 210 aaKnown RBP16.56■□□□□ 0.24
TRAM1-201ENST00000262213 UQCRC2P22695 453 aa16.56■□□□□ 0.24
TRAM1-201ENST00000262213 CD79BP40259 229 aa16.56■□□□□ 0.24
TRAM1-201ENST00000262213 ARPC4P59998 168 aa16.56■□□□□ 0.24
TRAM1-201ENST00000262213 WDR5P61964 334 aaKnown RBP16.56■□□□□ 0.24
TRAM1-201ENST00000262213 TRIQKQ629K1 86 aa16.56■□□□□ 0.24
TRAM1-201ENST00000262213 ACSM5Q6NUN0 579 aa16.56■□□□□ 0.24
TRAM1-201ENST00000262213 TMCO2Q7Z6W1 182 aaPredicted RBP16.56■□□□□ 0.24
TRAM1-201ENST00000262213 C19orf18Q8NEA5 215 aa16.56■□□□□ 0.24
TRAM1-201ENST00000262213 IL21Q9HBE4 155 aa16.56■□□□□ 0.24
TRAM1-201ENST00000262213 MYNNQ9NPC7 610 aa16.56■□□□□ 0.24
TRAM1-201ENST00000262213 NLKQ9UBE8 527 aa16.56■□□□□ 0.24
TRAM1-201ENST00000262213 INSL5Q9Y5Q6 135 aa16.56■□□□□ 0.24
TRAM1-201ENST00000262213 SLC35F4A4IF30 521 aa16.56■□□□□ 0.24
TRAM1-201ENST00000262213 NEDD8-MDP1E9PL57 170 aa16.56■□□□□ 0.24
TRAM1-201ENST00000262213 RAB36O95755 333 aa16.56■□□□□ 0.24
TRAM1-201ENST00000262213 SLC2A2P11168 524 aaPredicted RBP16.56■□□□□ 0.24
TRAM1-201ENST00000262213 XPAP23025 273 aaPredicted RBP16.56■□□□□ 0.24
TRAM1-201ENST00000262213 RECQLP46063 649 aaPredicted RBP16.56■□□□□ 0.24
TRAM1-201ENST00000262213 TMEM115Q12893 351 aaPredicted RBP16.56■□□□□ 0.24
TRAM1-201ENST00000262213 P2RY14Q15391 338 aa16.56■□□□□ 0.24
TRAM1-201ENST00000262213 ZNF284Q2VY69 593 aa16.56■□□□□ 0.24
TRAM1-201ENST00000262213 ARSIQ5FYB1 569 aa16.56■□□□□ 0.24
TRAM1-201ENST00000262213 LCN1P1Q5VSP4 162 aa16.56■□□□□ 0.24
TRAM1-201ENST00000262213 GAREM2Q75VX8 874 aa16.56■□□□□ 0.24
TRAM1-201ENST00000262213 RASGRP3Q8IV61 690 aa16.56■□□□□ 0.24
TRAM1-201ENST00000262213 KATNB1Q9BVA0 655 aa16.56■□□□□ 0.24
TRAM1-201ENST00000262213 SEC14L3Q9UDX4 400 aa16.56■□□□□ 0.24
TRAM1-201ENST00000262213 ITM2BQ9Y287 266 aa16.56■□□□□ 0.24
TRAM1-201ENST00000262213 ALG5Q9Y673 324 aa16.56■□□□□ 0.24
TRAM1-201ENST00000262213 A0A1W2PQ45 241 aaPredicted RBP16.55■□□□□ 0.24
TRAM1-201ENST00000262213 A0A1W2PQY0 241 aa16.55■□□□□ 0.24
TRAM1-201ENST00000262213 SLC28A2O43868 658 aa16.55■□□□□ 0.24
TRAM1-201ENST00000262213 HPGDSO60760 199 aa16.55■□□□□ 0.24
TRAM1-201ENST00000262213 LEFTY1O75610 366 aa16.55■□□□□ 0.24
TRAM1-201ENST00000262213 IL1AP01583 271 aa16.55■□□□□ 0.24
TRAM1-201ENST00000262213 IFI30P13284 250 aa16.55■□□□□ 0.24
TRAM1-201ENST00000262213 MYL12AP19105 171 aa16.55■□□□□ 0.24
TRAM1-201ENST00000262213 IL12RB1P42701 662 aa16.55■□□□□ 0.24
TRAM1-201ENST00000262213 SLC9A3P48764 834 aa16.55■□□□□ 0.24
TRAM1-201ENST00000262213 POLR2LP62875 67 aaKnown RBP16.55■□□□□ 0.24
TRAM1-201ENST00000262213 CHRNEQ04844 493 aa16.55■□□□□ 0.24
TRAM1-201ENST00000262213 SNAPC1Q16533 368 aa16.55■□□□□ 0.24
TRAM1-201ENST00000262213 SYT14P1Q58G82 188 aa16.55■□□□□ 0.24
TRAM1-201ENST00000262213 DEFB128Q7Z7B8 93 aa16.55■□□□□ 0.24
TRAM1-201ENST00000262213 CYB5D2Q8WUJ1 264 aa16.55■□□□□ 0.24
TRAM1-201ENST00000262213 TM9SF4Q92544 642 aa16.55■□□□□ 0.24
TRAM1-201ENST00000262213 SNAPC3Q92966 411 aa16.55■□□□□ 0.24
TRAM1-201ENST00000262213 ANKRA2Q9H9E1 313 aa16.55■□□□□ 0.24
TRAM1-201ENST00000262213 A0A0G2JMP0 313 aa16.55■□□□□ 0.24
TRAM1-201ENST00000262213 SLC5A10A0PJK1 596 aa16.55■□□□□ 0.24
TRAM1-201ENST00000262213 FAAHO00519 579 aa16.55■□□□□ 0.24
TRAM1-201ENST00000262213 CASKO14936 926 aa16.55■□□□□ 0.24
TRAM1-201ENST00000262213 C1orf105O95561 183 aa16.55■□□□□ 0.24
TRAM1-201ENST00000262213 VIPR1P32241 457 aa16.55■□□□□ 0.24
TRAM1-201ENST00000262213 PCDH1Q08174 1060 aa16.55■□□□□ 0.24
TRAM1-201ENST00000262213 GPR19Q15760 415 aa16.55■□□□□ 0.24
TRAM1-201ENST00000262213 PODNL1Q6PEZ8 512 aa16.55■□□□□ 0.24
TRAM1-201ENST00000262213 METTL3Q86U44 580 aaKnown RBP16.55■□□□□ 0.24
TRAM1-201ENST00000262213 IQCHQ86VS3 1027 aa16.55■□□□□ 0.24
TRAM1-201ENST00000262213 COMTD1Q86VU5 262 aa16.55■□□□□ 0.24
TRAM1-201ENST00000262213 TMEM25Q86YD3 366 aa16.55■□□□□ 0.24
TRAM1-201ENST00000262213 Q8N402 240 aa16.55■□□□□ 0.24
TRAM1-201ENST00000262213 GDPD1Q8N9F7 314 aa16.55■□□□□ 0.24
TRAM1-201ENST00000262213 DTX3Q8N9I9 347 aa16.55■□□□□ 0.24
TRAM1-201ENST00000262213 BTN2A2Q8WVV5 523 aa16.55■□□□□ 0.24
TRAM1-201ENST00000262213 APOBEC4Q8WW27 367 aaKnown RBP16.55■□□□□ 0.24
TRAM1-201ENST00000262213 MRPS31Q92665 395 aaKnown RBP16.55■□□□□ 0.24
TRAM1-201ENST00000262213 EXOSC8Q96B26 276 aaKnown RBP16.55■□□□□ 0.24
TRAM1-201ENST00000262213 PDXPQ96GD0 296 aa16.55■□□□□ 0.24
TRAM1-201ENST00000262213 RNF186Q9NXI6 227 aa16.55■□□□□ 0.24
TRAM1-201ENST00000262213 HS3ST2Q9Y278 367 aa16.55■□□□□ 0.24
TRAM1-201ENST00000262213 A0A1W2PRU2 124 aa16.55■□□□□ 0.24
TRAM1-201ENST00000262213 ARRDC5A6NEK1 342 aa16.55■□□□□ 0.24
TRAM1-201ENST00000262213 WEE1P30291 646 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms