RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 PDK3Q15120 406 aa21.05■□□□□ 0.96
SIX3-201ENST00000260653 PRTGQ2VWP7 1150 aa21.05■□□□□ 0.96
SIX3-201ENST00000260653 CCDC80Q76M96 950 aa21.05■□□□□ 0.96
SIX3-201ENST00000260653 GATAD2AQ86YP4 633 aa21.05■□□□□ 0.96
SIX3-201ENST00000260653 TMEM52Q8NDY8 209 aa21.05■□□□□ 0.96
SIX3-201ENST00000260653 MAGEE2Q8TD90 523 aaPredicted RBP21.05■□□□□ 0.96
SIX3-201ENST00000260653 PIGKQ92643 395 aa21.05■□□□□ 0.96
SIX3-201ENST00000260653 TBC1D20Q96BZ9 403 aa21.05■□□□□ 0.96
SIX3-201ENST00000260653 OTUB1Q96FW1 271 aaPredicted RBP21.05■□□□□ 0.96
SIX3-201ENST00000260653 AHCYL2Q96HN2 611 aaKnown RBP21.05■□□□□ 0.96
SIX3-201ENST00000260653 OSBPL11Q9BXB4 747 aa21.05■□□□□ 0.96
SIX3-201ENST00000260653 OR51I1Q9H343 314 aa21.05■□□□□ 0.96
SIX3-201ENST00000260653 A4GALTQ9NPC4 353 aa21.05■□□□□ 0.96
SIX3-201ENST00000260653 PCDHGB5Q9Y5G0 923 aa21.05■□□□□ 0.96
SIX3-201ENST00000260653 IGHV1OR21-1A0A087WYE8 117 aa21.05■□□□□ 0.96
SIX3-201ENST00000260653 HRO43593 1189 aa21.05■□□□□ 0.96
SIX3-201ENST00000260653 DIRAS1O95057 198 aa21.05■□□□□ 0.96
SIX3-201ENST00000260653 MED26O95402 600 aa21.05■□□□□ 0.96
SIX3-201ENST00000260653 FABP3P05413 133 aa21.05■□□□□ 0.96
SIX3-201ENST00000260653 XKP51811 444 aa21.05■□□□□ 0.96
SIX3-201ENST00000260653 KCNJ10P78508 379 aa21.05■□□□□ 0.96
SIX3-201ENST00000260653 NHSL2Q5HYW2 709 aa21.05■□□□□ 0.96
SIX3-201ENST00000260653 RPS26P11Q5JNZ5 115 aaPredicted RBP21.05■□□□□ 0.96
SIX3-201ENST00000260653 HS3ST5Q8IZT8 346 aa21.05■□□□□ 0.96
SIX3-201ENST00000260653 CA13Q8N1Q1 262 aa21.05■□□□□ 0.96
SIX3-201ENST00000260653 OR4K14Q8NGD5 310 aa21.05■□□□□ 0.96
SIX3-201ENST00000260653 SFXN5Q8TD22 340 aa21.05■□□□□ 0.96
SIX3-201ENST00000260653 KAT2AQ92830 837 aa21.05■□□□□ 0.96
SIX3-201ENST00000260653 DOHHQ9BU89 302 aa21.05■□□□□ 0.96
SIX3-201ENST00000260653 EPHA6Q9UF33 1036 aa21.05■□□□□ 0.96
SIX3-201ENST00000260653 U3KQV3 271 aa21.05■□□□□ 0.96
SIX3-201ENST00000260653 CASC3O15234 703 aaKnown RBP21.04■□□□□ 0.96
SIX3-201ENST00000260653 GABRA4P48169 554 aa21.04■□□□□ 0.96
SIX3-201ENST00000260653 SELENOWP63302 87 aa21.04■□□□□ 0.96
SIX3-201ENST00000260653 ID2Q02363 134 aa21.04■□□□□ 0.96
SIX3-201ENST00000260653 AMZ1Q400G9 498 aa21.04■□□□□ 0.96
SIX3-201ENST00000260653 REEP3Q6NUK4 255 aa21.04■□□□□ 0.96
SIX3-201ENST00000260653 TMEM179BQ7Z7N9 219 aa21.04■□□□□ 0.96
SIX3-201ENST00000260653 STK32CQ86UX6 486 aa21.04■□□□□ 0.96
SIX3-201ENST00000260653 LRRC25Q8N386 305 aaPredicted RBP21.04■□□□□ 0.96
SIX3-201ENST00000260653 MARVELD2Q8N4S9 558 aa21.04■□□□□ 0.96
SIX3-201ENST00000260653 COL26A1Q96A83 441 aa21.04■□□□□ 0.96
SIX3-201ENST00000260653 ZDHHC12Q96GR4 267 aa21.04■□□□□ 0.96
SIX3-201ENST00000260653 TMEM19Q96HH6 336 aa21.04■□□□□ 0.96
SIX3-201ENST00000260653 YIPF4Q9BSR8 244 aa21.04■□□□□ 0.96
SIX3-201ENST00000260653 RAB33BQ9H082 229 aa21.04■□□□□ 0.96
SIX3-201ENST00000260653 ANKHQ9HCJ1 492 aa21.04■□□□□ 0.96
SIX3-201ENST00000260653 VNN3Q9NY84 501 aa21.04■□□□□ 0.96
SIX3-201ENST00000260653 UBAP1Q9NZ09 502 aa21.04■□□□□ 0.96
SIX3-201ENST00000260653 CCDC88CQ9P219 2028 aa21.04■□□□□ 0.96
SIX3-201ENST00000260653 CYR61O00622 381 aa21.04■□□□□ 0.96
SIX3-201ENST00000260653 SRPX2O60687 465 aaPredicted RBP21.04■□□□□ 0.96
SIX3-201ENST00000260653 TFPTP0C1Z6 253 aa21.04■□□□□ 0.96
SIX3-201ENST00000260653 OR12D1P0DN82 309 aa21.04■□□□□ 0.96
SIX3-201ENST00000260653 LASP1Q14847 261 aaKnown RBP21.04■□□□□ 0.96
SIX3-201ENST00000260653 MYBPC3Q14896 1274 aa21.04■□□□□ 0.96
SIX3-201ENST00000260653 MAPK11Q15759 364 aa21.04■□□□□ 0.96
SIX3-201ENST00000260653 CRB2Q5IJ48 1285 aa21.04■□□□□ 0.96
SIX3-201ENST00000260653 ZDHHC13Q8IUH4 622 aa21.04■□□□□ 0.96
SIX3-201ENST00000260653 Q8N9G6 341 aaPredicted RBP21.04■□□□□ 0.96
SIX3-201ENST00000260653 N4BP2L2Q92802 583 aaPredicted RBP21.04■□□□□ 0.96
SIX3-201ENST00000260653 TRPC4Q9UBN4 977 aa21.04■□□□□ 0.96
SIX3-201ENST00000260653 FAM227AF5H4B4 570 aa21.03■□□□□ 0.96
SIX3-201ENST00000260653 G3V2T6 193 aa21.03■□□□□ 0.96
SIX3-201ENST00000260653 LDB3O75112 727 aa21.03■□□□□ 0.96
SIX3-201ENST00000260653 HMGN2P05204 90 aaKnown RBP21.03■□□□□ 0.96
SIX3-201ENST00000260653 FHP07954 510 aa21.03■□□□□ 0.96
SIX3-201ENST00000260653 GLB1P16278 677 aa21.03■□□□□ 0.96
SIX3-201ENST00000260653 TNFRSF1BP20333 461 aa21.03■□□□□ 0.96
SIX3-201ENST00000260653 EPHA8P29322 1005 aaPredicted RBP21.03■□□□□ 0.96
SIX3-201ENST00000260653 MRPS35P82673 323 aaKnown RBP21.03■□□□□ 0.96
SIX3-201ENST00000260653 ELP4Q96EB1 424 aa21.03■□□□□ 0.96
SIX3-201ENST00000260653 C7orf34Q96L11 122 aa21.03■□□□□ 0.96
SIX3-201ENST00000260653 C8orf4Q9NR00 106 aa21.03■□□□□ 0.96
SIX3-201ENST00000260653 SUSD2Q9UGT4 822 aa21.03■□□□□ 0.96
SIX3-201ENST00000260653 RAB23Q9ULC3 237 aa21.03■□□□□ 0.96
SIX3-201ENST00000260653 MATN1P21941 496 aa21.03■□□□□ 0.96
SIX3-201ENST00000260653 ARSFP54793 590 aa21.03■□□□□ 0.96
SIX3-201ENST00000260653 CFHR1Q03591 330 aa21.03■□□□□ 0.96
SIX3-201ENST00000260653 TMEM105Q8N8V8 129 aa21.03■□□□□ 0.96
SIX3-201ENST00000260653 SPACA6W5XKT8 324 aa21.03■□□□□ 0.96
SIX3-201ENST00000260653 WDR87Q6ZQQ6 2873 aa21.03■□□□□ 0.96
SIX3-201ENST00000260653 A0A0A6YYC8 382 aaPredicted RBP21.02■□□□□ 0.96
SIX3-201ENST00000260653 MYOCOSA0A1B0GUC4 107 aa21.02■□□□□ 0.96
SIX3-201ENST00000260653 PRAMEF27A3QJZ7 478 aa21.02■□□□□ 0.96
SIX3-201ENST00000260653 C5orf58C9J3I9 102 aa21.02■□□□□ 0.96
SIX3-201ENST00000260653 I3L1I5 382 aaPredicted RBP21.02■□□□□ 0.96
SIX3-201ENST00000260653 B4GAT1O43505 415 aa21.02■□□□□ 0.96
SIX3-201ENST00000260653 E2F6O75461 281 aa21.02■□□□□ 0.96
SIX3-201ENST00000260653 CYP27C1Q4G0S4 372 aa21.02■□□□□ 0.96
SIX3-201ENST00000260653 IQCCQ4KMZ1 466 aa21.02■□□□□ 0.96
SIX3-201ENST00000260653 C11orf74Q86VG3 221 aa21.02■□□□□ 0.96
SIX3-201ENST00000260653 SLC30A8Q8IWU4 369 aa21.02■□□□□ 0.96
SIX3-201ENST00000260653 CHERPQ8IWX8 916 aaKnown RBP21.02■□□□□ 0.96
SIX3-201ENST00000260653 SMYD1Q8NB12 490 aa21.02■□□□□ 0.96
SIX3-201ENST00000260653 OR56A1Q8NGH5 318 aa21.02■□□□□ 0.96
SIX3-201ENST00000260653 XAGE5Q8WWM1 108 aa21.02■□□□□ 0.96
SIX3-201ENST00000260653 PDE7BQ9NP56 450 aa21.02■□□□□ 0.96
SIX3-201ENST00000260653 TMEM9Q9P0T7 183 aa21.02■□□□□ 0.96
SIX3-201ENST00000260653 ZNF232Q9UNY5 417 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms