RNA–Protein interactions for RNA: ENST00000260327.8

CTDSPL2-201, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 6,828 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-201ENST00000260327 ABCG4Q9H172 646 aa9.34□□□□□ -0.91
CTDSPL2-201ENST00000260327 MRTO4Q9UKD2 239 aaKnown RBP9.34□□□□□ -0.91
CTDSPL2-201ENST00000260327 HSPE1-MOB4S4R3N1 261 aa9.34□□□□□ -0.91
CTDSPL2-201ENST00000260327 SLC35G6P0C7Q6 338 aa9.34□□□□□ -0.91
CTDSPL2-201ENST00000260327 IDSP22304 550 aa9.34□□□□□ -0.91
CTDSPL2-201ENST00000260327 INHBCP55103 352 aa9.34□□□□□ -0.91
CTDSPL2-201ENST00000260327 AGAP7PQ5VUJ5 663 aa9.34□□□□□ -0.91
CTDSPL2-201ENST00000260327 C3P1Q6ZMU1 363 aa9.34□□□□□ -0.91
CTDSPL2-201ENST00000260327 LINC00471Q8N535 108 aa9.34□□□□□ -0.91
CTDSPL2-201ENST00000260327 OR5T1Q8NG75 326 aa9.34□□□□□ -0.91
CTDSPL2-201ENST00000260327 ARNTL2Q8WYA1 636 aa9.34□□□□□ -0.91
CTDSPL2-201ENST00000260327 RTP4Q96DX8 246 aa9.34□□□□□ -0.91
CTDSPL2-201ENST00000260327 SSX3Q99909 188 aa9.34□□□□□ -0.91
CTDSPL2-201ENST00000260327 PHPT1Q9NRX4 125 aaPredicted RBP9.34□□□□□ -0.91
CTDSPL2-201ENST00000260327 NENFQ9UMX5 172 aa9.34□□□□□ -0.91
CTDSPL2-201ENST00000260327 WNT9AO14904 365 aa9.34□□□□□ -0.92
CTDSPL2-201ENST00000260327 CYB5AP00167 134 aa9.34□□□□□ -0.92
CTDSPL2-201ENST00000260327 IL3P08700 152 aa9.34□□□□□ -0.92
CTDSPL2-201ENST00000260327 TNFSF8P32971 234 aa9.34□□□□□ -0.92
CTDSPL2-201ENST00000260327 GJA5P36382 358 aa9.34□□□□□ -0.92
CTDSPL2-201ENST00000260327 RPS26P62854 115 aaKnown RBP9.34□□□□□ -0.92
CTDSPL2-201ENST00000260327 CLDN10P78369 228 aa9.34□□□□□ -0.92
CTDSPL2-201ENST00000260327 PSAPL1Q6NUJ1 521 aa9.34□□□□□ -0.92
CTDSPL2-201ENST00000260327 ADGRG5Q8IZF4 528 aa9.34□□□□□ -0.92
CTDSPL2-201ENST00000260327 RHOXF1Q8NHV9 184 aa9.34□□□□□ -0.92
CTDSPL2-201ENST00000260327 TRMT10AQ8TBZ6 339 aaKnown RBP9.34□□□□□ -0.92
CTDSPL2-201ENST00000260327 SLC2A13Q96QE2 648 aa9.34□□□□□ -0.92
CTDSPL2-201ENST00000260327 ZNF334Q9HCZ1 680 aaPredicted RBP9.34□□□□□ -0.92
CTDSPL2-201ENST00000260327 IGSF5Q9NSI5 407 aa9.34□□□□□ -0.92
CTDSPL2-201ENST00000260327 DEC1Q9P2X7 70 aa9.34□□□□□ -0.92
CTDSPL2-201ENST00000260327 PLAGL1Q9UM63 463 aa9.34□□□□□ -0.92
CTDSPL2-201ENST00000260327 SELPP16109 830 aa9.33□□□□□ -0.92
CTDSPL2-201ENST00000260327 ENDOUP21128 410 aaKnown RBP9.33□□□□□ -0.92
CTDSPL2-201ENST00000260327 PREPP48147 710 aa9.33□□□□□ -0.92
CTDSPL2-201ENST00000260327 RACK1P63244 317 aaKnown RBP9.33□□□□□ -0.92
CTDSPL2-201ENST00000260327 CARD16Q5EG05 197 aa9.33□□□□□ -0.92
CTDSPL2-201ENST00000260327 OR8J1Q8NGP2 316 aa9.33□□□□□ -0.92
CTDSPL2-201ENST00000260327 STK35Q8TDR2 534 aa9.33□□□□□ -0.92
CTDSPL2-201ENST00000260327 CYB5D2Q8WUJ1 264 aa9.33□□□□□ -0.92
CTDSPL2-201ENST00000260327 MAN2C1Q9NTJ4 1040 aa9.33□□□□□ -0.92
CTDSPL2-201ENST00000260327 GJD2Q9UKL4 321 aa9.33□□□□□ -0.92
CTDSPL2-201ENST00000260327 ACSL6Q9UKU0 697 aa9.33□□□□□ -0.92
CTDSPL2-201ENST00000260327 KCNIP3Q9Y2W7 256 aa9.33□□□□□ -0.92
CTDSPL2-201ENST00000260327 CACNG2Q9Y698 323 aa9.33□□□□□ -0.92
CTDSPL2-201ENST00000260327 RGPD1P0DJD0 1748 aa9.33□□□□□ -0.92
CTDSPL2-201ENST00000260327 A8MUA0 341 aa9.33□□□□□ -0.92
CTDSPL2-201ENST00000260327 KDELR3O43731 214 aa9.33□□□□□ -0.92
CTDSPL2-201ENST00000260327 HPGDSO60760 199 aa9.33□□□□□ -0.92
CTDSPL2-201ENST00000260327 B3GALNT1O75752 331 aa9.33□□□□□ -0.92
CTDSPL2-201ENST00000260327 ARHGEF15O94989 841 aa9.33□□□□□ -0.92
CTDSPL2-201ENST00000260327 GKN3PP0CG01 181 aa9.33□□□□□ -0.92
CTDSPL2-201ENST00000260327 CSNK2A2P19784 350 aaPredicted RBP9.33□□□□□ -0.92
CTDSPL2-201ENST00000260327 M6PRP20645 277 aa9.33□□□□□ -0.92
CTDSPL2-201ENST00000260327 CRHBPP24387 322 aa9.33□□□□□ -0.92
CTDSPL2-201ENST00000260327 VSX2P58304 361 aaPredicted RBP9.33□□□□□ -0.92
CTDSPL2-201ENST00000260327 MINDY4Q4G0A6 757 aa9.33□□□□□ -0.92
CTDSPL2-201ENST00000260327 STEAP3Q658P3 488 aa9.33□□□□□ -0.92
CTDSPL2-201ENST00000260327 B3GNT8Q7Z7M8 397 aa9.33□□□□□ -0.92
CTDSPL2-201ENST00000260327 FBXO15Q8NCQ5 510 aaPredicted RBP9.33□□□□□ -0.92
CTDSPL2-201ENST00000260327 CNOT9Q92600 299 aaKnown RBP9.33□□□□□ -0.92
CTDSPL2-201ENST00000260327 IGSF8Q969P0 613 aa9.33□□□□□ -0.92
CTDSPL2-201ENST00000260327 RHBDF1Q96CC6 855 aa9.33□□□□□ -0.92
CTDSPL2-201ENST00000260327 ZNF436Q9C0F3 470 aaPredicted RBP9.33□□□□□ -0.92
CTDSPL2-201ENST00000260327 POPDC3Q9HBV1 291 aa9.33□□□□□ -0.92
CTDSPL2-201ENST00000260327 IL20RAQ9UHF4 553 aa9.33□□□□□ -0.92
CTDSPL2-201ENST00000260327 SCN11AQ9UI33 1791 aa9.33□□□□□ -0.92
CTDSPL2-201ENST00000260327 WASHC1A8K0Z3 465 aa9.33□□□□□ -0.92
CTDSPL2-201ENST00000260327 SMN1Q16637 294 aaKnown RBP9.33□□□□□ -0.92
CTDSPL2-201ENST00000260327 HYAL4Q2M3T9 481 aa9.33□□□□□ -0.92
CTDSPL2-201ENST00000260327 TXNDC8Q6A555 127 aa9.33□□□□□ -0.92
CTDSPL2-201ENST00000260327 GDF6Q6KF10 455 aaPredicted RBP9.33□□□□□ -0.92
CTDSPL2-201ENST00000260327 AGTRAPQ6RW13 159 aa9.33□□□□□ -0.92
CTDSPL2-201ENST00000260327 Q6ZVU0 165 aa9.33□□□□□ -0.92
CTDSPL2-201ENST00000260327 SLC16A9Q7RTY1 509 aa9.33□□□□□ -0.92
CTDSPL2-201ENST00000260327 ZNF584Q8IVC4 421 aa9.33□□□□□ -0.92
CTDSPL2-201ENST00000260327 ACBD4Q8NC06 268 aa9.33□□□□□ -0.92
CTDSPL2-201ENST00000260327 DBF4BQ8NFT6 615 aa9.33□□□□□ -0.92
CTDSPL2-201ENST00000260327 MAGIXQ9H6Y5 334 aa9.33□□□□□ -0.92
CTDSPL2-201ENST00000260327 DLGAP4Q9Y2H0 992 aa9.33□□□□□ -0.92
CTDSPL2-201ENST00000260327 OR6C65A6NJZ3 312 aa9.33□□□□□ -0.92
CTDSPL2-201ENST00000260327 ERI3O43414 337 aaKnown RBP9.33□□□□□ -0.92
CTDSPL2-201ENST00000260327 IFNA2P01563 188 aa9.33□□□□□ -0.92
CTDSPL2-201ENST00000260327 PRNPP04156 253 aa9.33□□□□□ -0.92
CTDSPL2-201ENST00000260327 MAT2AP31153 395 aaKnown RBP9.33□□□□□ -0.92
CTDSPL2-201ENST00000260327 SP3Q02447 781 aa9.33□□□□□ -0.92
CTDSPL2-201ENST00000260327 SSX2Q16385 188 aa9.33□□□□□ -0.92
CTDSPL2-201ENST00000260327 PRAMEF14Q5SWL7 426 aa9.33□□□□□ -0.92
CTDSPL2-201ENST00000260327 TAC3Q9UHF0 121 aa9.33□□□□□ -0.92
CTDSPL2-201ENST00000260327 GLS2Q9UI32 602 aa9.33□□□□□ -0.92
CTDSPL2-201ENST00000260327 COPS3Q9UNS2 423 aa9.33□□□□□ -0.92
CTDSPL2-201ENST00000260327 LRRC37A3O60309 1634 aa9.33□□□□□ -0.92
CTDSPL2-201ENST00000260327 GRXCR1A8MXD5 290 aa9.33□□□□□ -0.92
CTDSPL2-201ENST00000260327 EDIL3O43854 480 aa9.33□□□□□ -0.92
CTDSPL2-201ENST00000260327 OR12D1P0DN82 309 aa9.33□□□□□ -0.92
CTDSPL2-201ENST00000260327 C21orf33P30042 268 aaPredicted RBP9.33□□□□□ -0.92
CTDSPL2-201ENST00000260327 AGTR1P30556 359 aa9.33□□□□□ -0.92
CTDSPL2-201ENST00000260327 SLC6A9P48067 706 aa9.33□□□□□ -0.92
CTDSPL2-201ENST00000260327 GSTM4Q03013 218 aa9.33□□□□□ -0.92
CTDSPL2-201ENST00000260327 HES5Q5TA89 166 aa9.33□□□□□ -0.92
CTDSPL2-201ENST00000260327 GDPD4Q6W3E5 623 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms