RNA–Protein interactions for RNA: ENST00000258909.13

TM6SF1-201, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best)

Gene TM6SF1, Length 1,469 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-201ENST00000258909 NUP107P57740 925 aa17.54■□□□□ 0.4
TM6SF1-201ENST00000258909 BIKQ13323 160 aa17.54■□□□□ 0.4
TM6SF1-201ENST00000258909 PRAMEF20Q5VT98 475 aa17.54■□□□□ 0.4
TM6SF1-201ENST00000258909 SLC22A10Q63ZE4 541 aa17.54■□□□□ 0.4
TM6SF1-201ENST00000258909 ZNF585AQ6P3V2 769 aa17.54■□□□□ 0.4
TM6SF1-201ENST00000258909 TRILQ7L0X0 811 aa17.54■□□□□ 0.4
TM6SF1-201ENST00000258909 NUDT13Q86X67 352 aa17.54■□□□□ 0.4
TM6SF1-201ENST00000258909 C7orf57Q8NEG2 295 aa17.54■□□□□ 0.4
TM6SF1-201ENST00000258909 OR5M3Q8NGP4 307 aa17.54■□□□□ 0.4
TM6SF1-201ENST00000258909 UHMK1Q8TAS1 419 aaKnown RBP17.54■□□□□ 0.4
TM6SF1-201ENST00000258909 SLC44A1Q8WWI5 657 aa17.54■□□□□ 0.4
TM6SF1-201ENST00000258909 RND1Q92730 232 aa17.54■□□□□ 0.4
TM6SF1-201ENST00000258909 RIT1Q92963 219 aa17.54■□□□□ 0.4
TM6SF1-201ENST00000258909 ART5Q96L15 291 aa17.54■□□□□ 0.4
TM6SF1-201ENST00000258909 XPR1Q9UBH6 696 aa17.54■□□□□ 0.4
TM6SF1-201ENST00000258909 MTRF1LQ9UGC7 380 aaKnown RBP17.54■□□□□ 0.4
TM6SF1-201ENST00000258909 PGRMC2O15173 223 aa17.53■□□□□ 0.4
TM6SF1-201ENST00000258909 CCNG1P51959 295 aa17.53■□□□□ 0.4
TM6SF1-201ENST00000258909 ARFIP1P53367 373 aa17.53■□□□□ 0.4
TM6SF1-201ENST00000258909 FAM219BQ5XKK7 198 aa17.53■□□□□ 0.4
TM6SF1-201ENST00000258909 ADGRD1Q6QNK2 874 aa17.53■□□□□ 0.4
TM6SF1-201ENST00000258909 RNF111Q6ZNA4 994 aa17.53■□□□□ 0.4
TM6SF1-201ENST00000258909 RPS27LQ71UM5 84 aaKnown RBP17.53■□□□□ 0.4
TM6SF1-201ENST00000258909 NOA1Q8NC60 698 aaKnown RBP17.53■□□□□ 0.4
TM6SF1-201ENST00000258909 FAM13CQ8NE31 585 aa17.53■□□□□ 0.4
TM6SF1-201ENST00000258909 ZNF592Q92610 1267 aa17.53■□□□□ 0.4
TM6SF1-201ENST00000258909 SPACA9Q96E40 222 aaPredicted RBP17.53■□□□□ 0.4
TM6SF1-201ENST00000258909 PAFAH2Q99487 392 aa17.53■□□□□ 0.4
TM6SF1-201ENST00000258909 SPOCK3Q9BQ16 436 aa17.53■□□□□ 0.4
TM6SF1-201ENST00000258909 ENKD1Q9H0I2 346 aa17.53■□□□□ 0.4
TM6SF1-201ENST00000258909 TEX10Q9NXF1 929 aaPredicted RBP17.53■□□□□ 0.4
TM6SF1-201ENST00000258909 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.53■□□□□ 0.4
TM6SF1-201ENST00000258909 FREM3P0C091 2139 aa17.53■□□□□ 0.4
TM6SF1-201ENST00000258909 ANKRD17O75179 2603 aaKnown RBP17.52■□□□□ 0.4
TM6SF1-201ENST00000258909 POC1B-GALNT4F8VUJ3 575 aa17.52■□□□□ 0.4
TM6SF1-201ENST00000258909 FOXE1O00358 373 aaPredicted RBP17.52■□□□□ 0.4
TM6SF1-201ENST00000258909 IGHG3P01860 377 aa17.52■□□□□ 0.4
TM6SF1-201ENST00000258909 CLPSP04118 112 aa17.52■□□□□ 0.4
TM6SF1-201ENST00000258909 RFPL3SP0C7P2 107 aa17.52■□□□□ 0.4
TM6SF1-201ENST00000258909 SSTR2P30874 369 aa17.52■□□□□ 0.4
TM6SF1-201ENST00000258909 CHRNB4P30926 498 aa17.52■□□□□ 0.4
TM6SF1-201ENST00000258909 MAGEA12P43365 314 aa17.52■□□□□ 0.4
TM6SF1-201ENST00000258909 SLC37A1P57057 533 aa17.52■□□□□ 0.4
TM6SF1-201ENST00000258909 KCNJ2P63252 427 aa17.52■□□□□ 0.4
TM6SF1-201ENST00000258909 SLC10A1Q14973 349 aa17.52■□□□□ 0.4
TM6SF1-201ENST00000258909 WHAMMP3Q1A5X7 153 aa17.52■□□□□ 0.4
TM6SF1-201ENST00000258909 SPRED3Q2MJR0 410 aa17.52■□□□□ 0.4
TM6SF1-201ENST00000258909 SGO1Q5FBB7 561 aa17.52■□□□□ 0.4
TM6SF1-201ENST00000258909 TTC19Q6DKK2 380 aaPredicted RBP17.52■□□□□ 0.4
TM6SF1-201ENST00000258909 TMEM64Q6YI46 380 aa17.52■□□□□ 0.4
TM6SF1-201ENST00000258909 SLC29A4Q7RTT9 530 aa17.52■□□□□ 0.4
TM6SF1-201ENST00000258909 OR10G3Q8NGC4 313 aa17.52■□□□□ 0.4
TM6SF1-201ENST00000258909 ASB5Q8WWX0 329 aa17.52■□□□□ 0.4
TM6SF1-201ENST00000258909 WWTR1Q9GZV5 400 aa17.52■□□□□ 0.4
TM6SF1-201ENST00000258909 LDAHQ9H6V9 325 aa17.52■□□□□ 0.4
TM6SF1-201ENST00000258909 WDR41Q9HAD4 459 aa17.52■□□□□ 0.4
TM6SF1-201ENST00000258909 ZBTB26Q9HCK0 441 aa17.52■□□□□ 0.4
TM6SF1-201ENST00000258909 SH2D2AQ9NP31 389 aa17.52■□□□□ 0.4
TM6SF1-201ENST00000258909 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.52■□□□□ 0.4
TM6SF1-201ENST00000258909 PCTPQ9UKL6 214 aa17.52■□□□□ 0.4
TM6SF1-201ENST00000258909 ITGB1BP2Q9UKP3 347 aa17.52■□□□□ 0.4
TM6SF1-201ENST00000258909 KLK1P06870 262 aa17.51■□□□□ 0.39
TM6SF1-201ENST00000258909 RBP1P09455 135 aa17.51■□□□□ 0.39
TM6SF1-201ENST00000258909 SSTR4P31391 388 aa17.51■□□□□ 0.39
TM6SF1-201ENST00000258909 MAN2A2P49641 1150 aa17.51■□□□□ 0.39
TM6SF1-201ENST00000258909 TRAF3Q13114 568 aa17.51■□□□□ 0.39
TM6SF1-201ENST00000258909 EBPQ15125 230 aaKnown RBP17.51■□□□□ 0.39
TM6SF1-201ENST00000258909 HYAL4Q2M3T9 481 aa17.51■□□□□ 0.39
TM6SF1-201ENST00000258909 RELL1Q8IUW5 271 aa17.51■□□□□ 0.39
TM6SF1-201ENST00000258909 OR10Q1Q8NGQ4 319 aa17.51■□□□□ 0.39
TM6SF1-201ENST00000258909 LILRB4Q8NHJ6 448 aa17.51■□□□□ 0.39
TM6SF1-201ENST00000258909 PAQR8Q8TEZ7 354 aa17.51■□□□□ 0.39
TM6SF1-201ENST00000258909 CHTF18Q8WVB6 975 aa17.51■□□□□ 0.39
TM6SF1-201ENST00000258909 SERPINI1Q99574 410 aa17.51■□□□□ 0.39
TM6SF1-201ENST00000258909 PELOQ9BRX2 385 aaKnown RBP17.51■□□□□ 0.39
TM6SF1-201ENST00000258909 FUT8Q9BYC5 575 aa17.51■□□□□ 0.39
TM6SF1-201ENST00000258909 MRPL1Q9BYD6 325 aaKnown RBP17.51■□□□□ 0.39
TM6SF1-201ENST00000258909 EXO5Q9H790 373 aa17.51■□□□□ 0.39
TM6SF1-201ENST00000258909 PROK2Q9HC23 129 aa17.51■□□□□ 0.39
TM6SF1-201ENST00000258909 NPDC1Q9NQX5 325 aaPredicted RBP17.51■□□□□ 0.39
TM6SF1-201ENST00000258909 ALKBH4Q9NXW9 302 aa17.51■□□□□ 0.39
TM6SF1-201ENST00000258909 PSD3Q9NYI0 1048 aa17.51■□□□□ 0.39
TM6SF1-201ENST00000258909 ACAD8Q9UKU7 415 aa17.51■□□□□ 0.39
TM6SF1-201ENST00000258909 IKBKGQ9Y6K9 419 aa17.51■□□□□ 0.39
TM6SF1-201ENST00000258909 A0A1B0GTL3 188 aa17.5■□□□□ 0.39
TM6SF1-201ENST00000258909 A0A1B0GVC2 190 aa17.5■□□□□ 0.39
TM6SF1-201ENST00000258909 PPP6CO00743 305 aa17.5■□□□□ 0.39
TM6SF1-201ENST00000258909 SMIM24O75264 130 aa17.5■□□□□ 0.39
TM6SF1-201ENST00000258909 SLC35E2P0CK97 266 aa17.5■□□□□ 0.39
TM6SF1-201ENST00000258909 TSPAN8P19075 237 aa17.5■□□□□ 0.39
TM6SF1-201ENST00000258909 POU3F2P20265 443 aaPredicted RBP17.5■□□□□ 0.39
TM6SF1-201ENST00000258909 ACVR2AP27037 513 aa17.5■□□□□ 0.39
TM6SF1-201ENST00000258909 TLE4Q04727 773 aa17.5■□□□□ 0.39
TM6SF1-201ENST00000258909 FRG2Q64ET8 278 aa17.5■□□□□ 0.39
TM6SF1-201ENST00000258909 METTL2BQ6P1Q9 378 aaKnown RBP17.5■□□□□ 0.39
TM6SF1-201ENST00000258909 MMGT1Q8N4V1 131 aa17.5■□□□□ 0.39
TM6SF1-201ENST00000258909 SLC15A4Q8N697 577 aa17.5■□□□□ 0.39
TM6SF1-201ENST00000258909 ACBD4Q8NC06 268 aa17.5■□□□□ 0.39
TM6SF1-201ENST00000258909 ISL2Q96A47 359 aa17.5■□□□□ 0.39
TM6SF1-201ENST00000258909 JSRP1Q96MG2 331 aaPredicted RBP17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms