RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 OR4N5Q8IXE1 308 aa17.82■□□□□ 0.44
TRIM47-201ENST00000254816 DNAJC22Q8N4W6 341 aa17.82■□□□□ 0.44
TRIM47-201ENST00000254816 HORMAD2Q8N7B1 307 aa17.82■□□□□ 0.44
TRIM47-201ENST00000254816 NEURL3Q96EH8 262 aa17.82■□□□□ 0.44
TRIM47-201ENST00000254816 AHCYL2Q96HN2 611 aaKnown RBP17.82■□□□□ 0.44
TRIM47-201ENST00000254816 PYURFQ96I23 114 aa17.82■□□□□ 0.44
TRIM47-201ENST00000254816 C10orf90Q96M02 699 aa17.82■□□□□ 0.44
TRIM47-201ENST00000254816 SH3GL3Q99963 347 aa17.82■□□□□ 0.44
TRIM47-201ENST00000254816 CSNK1G3Q9Y6M4 447 aa17.82■□□□□ 0.44
TRIM47-201ENST00000254816 SGK494L7N484 410 aa17.81■□□□□ 0.44
TRIM47-201ENST00000254816 PCGF2P35227 344 aa17.81■□□□□ 0.44
TRIM47-201ENST00000254816 BUD31P41223 144 aaPredicted RBP17.81■□□□□ 0.44
TRIM47-201ENST00000254816 SPIDRQ14159 915 aa17.81■□□□□ 0.44
TRIM47-201ENST00000254816 CEACAM20Q6UY09 585 aa17.81■□□□□ 0.44
TRIM47-201ENST00000254816 VTCN1Q7Z7D3 282 aa17.81■□□□□ 0.44
TRIM47-201ENST00000254816 BDH2Q9BUT1 245 aa17.81■□□□□ 0.44
TRIM47-201ENST00000254816 DDX18Q9NVP1 670 aaKnown RBP17.81■□□□□ 0.44
TRIM47-201ENST00000254816 SOHLH2Q9NX45 425 aa17.81■□□□□ 0.44
TRIM47-201ENST00000254816 FRYLO94915 3013 aa17.81■□□□□ 0.44
TRIM47-201ENST00000254816 MED26O95402 600 aa17.81■□□□□ 0.44
TRIM47-201ENST00000254816 CDH2P19022 906 aaPredicted RBP17.81■□□□□ 0.44
TRIM47-201ENST00000254816 PCSK6P29122 969 aa17.81■□□□□ 0.44
TRIM47-201ENST00000254816 CAPGP40121 348 aa17.81■□□□□ 0.44
TRIM47-201ENST00000254816 ALDH3B2P48448 385 aa17.81■□□□□ 0.44
TRIM47-201ENST00000254816 SCARB2Q14108 478 aa17.81■□□□□ 0.44
TRIM47-201ENST00000254816 ZIK1Q3SY52 487 aaPredicted RBP17.81■□□□□ 0.44
TRIM47-201ENST00000254816 DHRSXQ8N5I4 330 aa17.81■□□□□ 0.44
TRIM47-201ENST00000254816 PSMA8Q8TAA3 256 aa17.81■□□□□ 0.44
TRIM47-201ENST00000254816 RAB8BQ92930 207 aa17.81■□□□□ 0.44
TRIM47-201ENST00000254816 TCTN2Q96GX1 697 aa17.81■□□□□ 0.44
TRIM47-201ENST00000254816 ZNF681Q96N22 645 aa17.81■□□□□ 0.44
TRIM47-201ENST00000254816 ANKRA2Q9H9E1 313 aa17.81■□□□□ 0.44
TRIM47-201ENST00000254816 TMEM9Q9P0T7 183 aa17.81■□□□□ 0.44
TRIM47-201ENST00000254816 PHF11Q9UIL8 331 aa17.81■□□□□ 0.44
TRIM47-201ENST00000254816 SAMD4AQ9UPU9 718 aaKnown RBP17.81■□□□□ 0.44
TRIM47-201ENST00000254816 IGHV1OR21-1A0A087WYE8 117 aa17.8■□□□□ 0.44
TRIM47-201ENST00000254816 UPK1AO00322 258 aa17.8■□□□□ 0.44
TRIM47-201ENST00000254816 NUDT21O43809 227 aaKnown RBP17.8■□□□□ 0.44
TRIM47-201ENST00000254816 GALR3O60755 368 aaPredicted RBP17.8■□□□□ 0.44
TRIM47-201ENST00000254816 OPN1SWP03999 348 aa17.8■□□□□ 0.44
TRIM47-201ENST00000254816 CSNK2A2P19784 350 aaPredicted RBP17.8■□□□□ 0.44
TRIM47-201ENST00000254816 ZNF10P21506 573 aaPredicted RBP17.8■□□□□ 0.44
TRIM47-201ENST00000254816 MLLT3P42568 568 aaPredicted RBP17.8■□□□□ 0.44
TRIM47-201ENST00000254816 RXRGP48443 463 aa17.8■□□□□ 0.44
TRIM47-201ENST00000254816 PRKAG1P54619 331 aa17.8■□□□□ 0.44
TRIM47-201ENST00000254816 DSTNP60981 165 aa17.8■□□□□ 0.44
TRIM47-201ENST00000254816 CFHR1Q03591 330 aa17.8■□□□□ 0.44
TRIM47-201ENST00000254816 VAC14Q08AM6 782 aa17.8■□□□□ 0.44
TRIM47-201ENST00000254816 GPR19Q15760 415 aa17.8■□□□□ 0.44
TRIM47-201ENST00000254816 ZC3H12BQ5HYM0 836 aaKnown RBP17.8■□□□□ 0.44
TRIM47-201ENST00000254816 MANEAQ5SRI9 462 aa17.8■□□□□ 0.44
TRIM47-201ENST00000254816 TMEM107Q6UX40 140 aa17.8■□□□□ 0.44
TRIM47-201ENST00000254816 USP53Q70EK8 1073 aa17.8■□□□□ 0.44
TRIM47-201ENST00000254816 OR9A2Q8NGT5 310 aa17.8■□□□□ 0.44
TRIM47-201ENST00000254816 OR9A4Q8NGU2 314 aa17.8■□□□□ 0.44
TRIM47-201ENST00000254816 TMBIM1Q969X1 311 aa17.8■□□□□ 0.44
TRIM47-201ENST00000254816 OTUB1Q96FW1 271 aaPredicted RBP17.8■□□□□ 0.44
TRIM47-201ENST00000254816 ASPSCR1Q9BZE9 553 aa17.8■□□□□ 0.44
TRIM47-201ENST00000254816 RAD21L1Q9H4I0 556 aa17.8■□□□□ 0.44
TRIM47-201ENST00000254816 SERHL2Q9H4I8 314 aa17.8■□□□□ 0.44
TRIM47-201ENST00000254816 ZNF639Q9UID6 485 aa17.8■□□□□ 0.44
TRIM47-201ENST00000254816 SLC22A7Q9Y694 548 aa17.8■□□□□ 0.44
TRIM47-201ENST00000254816 ZNF780BQ9Y6R6 833 aa17.8■□□□□ 0.44
TRIM47-201ENST00000254816 TLCD2A6NGC4 264 aa17.79■□□□□ 0.44
TRIM47-201ENST00000254816 FAM227AF5H4B4 570 aa17.79■□□□□ 0.44
TRIM47-201ENST00000254816 B4GAT1O43505 415 aa17.79■□□□□ 0.44
TRIM47-201ENST00000254816 CFIP05156 583 aa17.79■□□□□ 0.44
TRIM47-201ENST00000254816 EPHA8P29322 1005 aaPredicted RBP17.79■□□□□ 0.44
TRIM47-201ENST00000254816 SLC5A2P31639 672 aa17.79■□□□□ 0.44
TRIM47-201ENST00000254816 IST1P53990 364 aa17.79■□□□□ 0.44
TRIM47-201ENST00000254816 EPHA4P54764 986 aa17.79■□□□□ 0.44
TRIM47-201ENST00000254816 SHC2P98077 582 aa17.79■□□□□ 0.44
TRIM47-201ENST00000254816 ID2Q02363 134 aa17.79■□□□□ 0.44
TRIM47-201ENST00000254816 KCNAB1Q14722 419 aa17.79■□□□□ 0.44
TRIM47-201ENST00000254816 LTB4RQ15722 352 aa17.79■□□□□ 0.44
TRIM47-201ENST00000254816 SNAP47Q5SQN1 464 aa17.79■□□□□ 0.44
TRIM47-201ENST00000254816 CBLL1Q75N03 491 aa17.79■□□□□ 0.44
TRIM47-201ENST00000254816 CEP68Q76N32 757 aa17.79■□□□□ 0.44
TRIM47-201ENST00000254816 TMEM52Q8NDY8 209 aa17.79■□□□□ 0.44
TRIM47-201ENST00000254816 TPD52L3Q96J77 140 aa17.79■□□□□ 0.44
TRIM47-201ENST00000254816 ZCCHC3Q9NUD5 404 aaKnown RBP17.79■□□□□ 0.44
TRIM47-201ENST00000254816 BDP1A6H8Y1 2624 aa17.79■□□□□ 0.44
TRIM47-201ENST00000254816 A0A1B0GVG6 124 aa17.79■□□□□ 0.44
TRIM47-201ENST00000254816 PATE3B3GLJ2 98 aa17.79■□□□□ 0.44
TRIM47-201ENST00000254816 RDH16O75452 317 aa17.79■□□□□ 0.44
TRIM47-201ENST00000254816 GLB1P16278 677 aa17.79■□□□□ 0.44
TRIM47-201ENST00000254816 SEPHS1P49903 392 aa17.79■□□□□ 0.44
TRIM47-201ENST00000254816 CDK6Q00534 326 aa17.79■□□□□ 0.44
TRIM47-201ENST00000254816 EEF1A2Q05639 463 aaKnown RBP17.79■□□□□ 0.44
TRIM47-201ENST00000254816 HLA-BQ31612 363 aa17.79■□□□□ 0.44
TRIM47-201ENST00000254816 KCTD21Q4G0X4 260 aa17.79■□□□□ 0.44
TRIM47-201ENST00000254816 BORAQ6PGQ7 559 aa17.79■□□□□ 0.44
TRIM47-201ENST00000254816 SLC44A2Q8IWA5 706 aaPredicted RBP17.79■□□□□ 0.44
TRIM47-201ENST00000254816 EID3Q8N140 333 aa17.79■□□□□ 0.44
TRIM47-201ENST00000254816 CA13Q8N1Q1 262 aa17.79■□□□□ 0.44
TRIM47-201ENST00000254816 ARHGEF39Q8N4T4 335 aa17.79■□□□□ 0.44
TRIM47-201ENST00000254816 OR2I1PQ8NGU4 316 aa17.79■□□□□ 0.44
TRIM47-201ENST00000254816 COL26A1Q96A83 441 aa17.79■□□□□ 0.44
TRIM47-201ENST00000254816 HSH2DQ96JZ2 352 aa17.79■□□□□ 0.44
TRIM47-201ENST00000254816 TMEM38AQ9H6F2 299 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms