RNA–Protein interactions for RNA: ENST00000254667.7

PTPRE-201, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRE, Length 5,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-201ENST00000254667 THAP4Q8WY91 577 aa18.11■□□□□ 0.49
PTPRE-201ENST00000254667 NPLQ9BXD5 320 aaPredicted RBP18.11■□□□□ 0.49
PTPRE-201ENST00000254667 A0A1W2PPL8 197 aa18.11■□□□□ 0.49
PTPRE-201ENST00000254667 CYP17A1P05093 508 aa18.11■□□□□ 0.49
PTPRE-201ENST00000254667 ARHGAP11AQ6P4F7 1023 aa18.11■□□□□ 0.49
PTPRE-201ENST00000254667 ZSCAN1Q8NBB4 408 aa18.11■□□□□ 0.49
PTPRE-201ENST00000254667 ZNF675Q8TD23 568 aa18.11■□□□□ 0.49
PTPRE-201ENST00000254667 C12orf43Q96C57 262 aaKnown RBP18.11■□□□□ 0.49
PTPRE-201ENST00000254667 PRAMEF26H0Y7S4 382 aa18.1■□□□□ 0.49
PTPRE-201ENST00000254667 L7N2F9 121 aa18.1■□□□□ 0.49
PTPRE-201ENST00000254667 DLGAP1O14490 977 aa18.1■□□□□ 0.49
PTPRE-201ENST00000254667 GLP1RP43220 463 aa18.1■□□□□ 0.49
PTPRE-201ENST00000254667 SELENOVP59797 346 aa18.1■□□□□ 0.49
PTPRE-201ENST00000254667 VAMP2P63027 116 aa18.1■□□□□ 0.49
PTPRE-201ENST00000254667 C6orf141Q5SZD1 244 aa18.1■□□□□ 0.49
PTPRE-201ENST00000254667 RABEPKQ7Z6M1 372 aa18.1■□□□□ 0.49
PTPRE-201ENST00000254667 GPAT4Q86UL3 456 aa18.1■□□□□ 0.49
PTPRE-201ENST00000254667 C3orf58Q8NDZ4 430 aa18.1■□□□□ 0.49
PTPRE-201ENST00000254667 TOR1AIP2Q8NFQ8 470 aa18.1■□□□□ 0.49
PTPRE-201ENST00000254667 ECHDC3Q96DC8 303 aa18.1■□□□□ 0.49
PTPRE-201ENST00000254667 SARDHQ9UL12 918 aa18.1■□□□□ 0.49
PTPRE-201ENST00000254667 TMBIM6P55061 237 aa18.1■□□□□ 0.49
PTPRE-201ENST00000254667 ARPC4P59998 168 aa18.1■□□□□ 0.49
PTPRE-201ENST00000254667 GAS6Q14393 721 aa18.1■□□□□ 0.49
PTPRE-201ENST00000254667 ZNF613Q6PF04 617 aa18.1■□□□□ 0.49
PTPRE-201ENST00000254667 ULK3Q6PHR2 472 aa18.1■□□□□ 0.49
PTPRE-201ENST00000254667 SERINC2Q96SA4 455 aa18.1■□□□□ 0.49
PTPRE-201ENST00000254667 NAA11Q9BSU3 229 aaPredicted RBP18.1■□□□□ 0.49
PTPRE-201ENST00000254667 FAM53CQ9NYF3 392 aa18.1■□□□□ 0.49
PTPRE-201ENST00000254667 MYH11P35749 1972 aa18.1■□□□□ 0.49
PTPRE-201ENST00000254667 SLC22A31A6NKX4 558 aa18.1■□□□□ 0.49
PTPRE-201ENST00000254667 RTCAO00442 366 aaKnown RBP18.1■□□□□ 0.49
PTPRE-201ENST00000254667 TTLL10Q6ZVT0 673 aa18.1■□□□□ 0.49
PTPRE-201ENST00000254667 UBE2Q1Q7Z7E8 422 aa18.1■□□□□ 0.49
PTPRE-201ENST00000254667 ZNF283Q8N7M2 679 aa18.1■□□□□ 0.49
PTPRE-201ENST00000254667 GATSQ8NAP1 163 aa18.1■□□□□ 0.49
PTPRE-201ENST00000254667 INO80EQ8NBZ0 244 aaPredicted RBP18.1■□□□□ 0.49
PTPRE-201ENST00000254667 SNAP29O95721 258 aa18.1■□□□□ 0.49
PTPRE-201ENST00000254667 GCGRP47871 477 aa18.1■□□□□ 0.49
PTPRE-201ENST00000254667 TPTEP56180 551 aa18.1■□□□□ 0.49
PTPRE-201ENST00000254667 PDZD3Q86UT5 571 aa18.1■□□□□ 0.49
PTPRE-201ENST00000254667 MRPL43Q8N983 215 aaKnown RBP18.1■□□□□ 0.49
PTPRE-201ENST00000254667 DHRS1Q96LJ7 313 aa18.1■□□□□ 0.49
PTPRE-201ENST00000254667 CNOT11Q9UKZ1 510 aaKnown RBP18.1■□□□□ 0.49
PTPRE-201ENST00000254667 GXYLT2A0PJZ3 443 aa18.09■□□□□ 0.49
PTPRE-201ENST00000254667 GRXCR2A6NFK2 248 aa18.09■□□□□ 0.49
PTPRE-201ENST00000254667 PROS1P07225 676 aa18.09■□□□□ 0.49
PTPRE-201ENST00000254667 SPARCP09486 303 aa18.09■□□□□ 0.49
PTPRE-201ENST00000254667 CEBPBP17676 345 aa18.09■□□□□ 0.49
PTPRE-201ENST00000254667 DCKP27707 260 aa18.09■□□□□ 0.49
PTPRE-201ENST00000254667 RPS15P62841 145 aaKnown RBP18.09■□□□□ 0.49
PTPRE-201ENST00000254667 IL22RA1Q8N6P7 574 aa18.09■□□□□ 0.49
PTPRE-201ENST00000254667 BARD1Q99728 777 aaKnown RBP18.09■□□□□ 0.49
PTPRE-201ENST00000254667 APOOQ9BUR5 198 aa18.09■□□□□ 0.49
PTPRE-201ENST00000254667 MROQ9BYG7 248 aa18.09■□□□□ 0.49
PTPRE-201ENST00000254667 MMP27Q9H306 513 aa18.09■□□□□ 0.49
PTPRE-201ENST00000254667 MTHFD2LQ9H903 347 aaPredicted RBP18.09■□□□□ 0.49
PTPRE-201ENST00000254667 EIF3KQ9UBQ5 218 aaKnown RBP18.09■□□□□ 0.49
PTPRE-201ENST00000254667 PRH1P02810 166 aa18.09■□□□□ 0.49
PTPRE-201ENST00000254667 NDUFV2P19404 249 aa18.09■□□□□ 0.49
PTPRE-201ENST00000254667 SERTAD2Q14140 314 aa18.09■□□□□ 0.49
PTPRE-201ENST00000254667 SPATC1Q76KD6 591 aa18.09■□□□□ 0.49
PTPRE-201ENST00000254667 OR2L8Q8NGY9 312 aa18.09■□□□□ 0.49
PTPRE-201ENST00000254667 ACTRT3Q9BYD9 372 aa18.09■□□□□ 0.49
PTPRE-201ENST00000254667 ARNT2Q9HBZ2 717 aa18.09■□□□□ 0.49
PTPRE-201ENST00000254667 DISC1C4P0D8 188 aa18.09■□□□□ 0.49
PTPRE-201ENST00000254667 ANHXE9PGG2 379 aa18.09■□□□□ 0.49
PTPRE-201ENST00000254667 FUT4P22083 530 aa18.09■□□□□ 0.49
PTPRE-201ENST00000254667 GNG2P59768 71 aa18.09■□□□□ 0.49
PTPRE-201ENST00000254667 LRIT3Q3SXY7 679 aa18.09■□□□□ 0.49
PTPRE-201ENST00000254667 ZNF542PQ5EBM4 170 aa18.09■□□□□ 0.49
PTPRE-201ENST00000254667 METTL2AQ96IZ6 378 aaKnown RBP18.09■□□□□ 0.49
PTPRE-201ENST00000254667 CHIAQ9BZP6 476 aa18.09■□□□□ 0.49
PTPRE-201ENST00000254667 ANKMY1Q9P2S6 941 aa18.09■□□□□ 0.49
PTPRE-201ENST00000254667 GLS2Q9UI32 602 aa18.09■□□□□ 0.49
PTPRE-201ENST00000254667 WASF3Q9UPY6 502 aa18.09■□□□□ 0.49
PTPRE-201ENST00000254667 NUP98P52948 1817 aa18.09■□□□□ 0.49
PTPRE-201ENST00000254667 SOBPA7XYQ1 873 aa18.09■□□□□ 0.49
PTPRE-201ENST00000254667 DPP6P42658 865 aa18.09■□□□□ 0.49
PTPRE-201ENST00000254667 SLC9A3P48764 834 aa18.09■□□□□ 0.49
PTPRE-201ENST00000254667 CBFBQ13951 182 aa18.09■□□□□ 0.49
PTPRE-201ENST00000254667 ARHGAP19Q14CB8 494 aa18.09■□□□□ 0.49
PTPRE-201ENST00000254667 SCGB2B2Q4G0G5 96 aa18.09■□□□□ 0.49
PTPRE-201ENST00000254667 ARHGAP12Q8IWW6 846 aa18.09■□□□□ 0.49
PTPRE-201ENST00000254667 CLSTN3Q9BQT9 956 aa18.09■□□□□ 0.49
PTPRE-201ENST00000254667 KLHL21Q9UJP4 597 aa18.09■□□□□ 0.49
PTPRE-201ENST00000254667 XPNPEP2O43895 674 aa18.08■□□□□ 0.49
PTPRE-201ENST00000254667 PRAMEF2O60811 474 aa18.08■□□□□ 0.49
PTPRE-201ENST00000254667 ACY1Q03154 408 aa18.08■□□□□ 0.49
PTPRE-201ENST00000254667 PRKCDQ05655 676 aa18.08■□□□□ 0.49
PTPRE-201ENST00000254667 NPRL3Q12980 569 aa18.08■□□□□ 0.49
PTPRE-201ENST00000254667 ANKDD1AQ495B1 522 aa18.08■□□□□ 0.49
PTPRE-201ENST00000254667 ZC3H14Q6PJT7 736 aaKnown RBP18.08■□□□□ 0.49
PTPRE-201ENST00000254667 KDM1BQ8NB78 822 aa18.08■□□□□ 0.49
PTPRE-201ENST00000254667 C14orf166Q9Y224 244 aaKnown RBP18.08■□□□□ 0.49
PTPRE-201ENST00000254667 C11orf98E9PRG8 122 aa18.08■□□□□ 0.49
PTPRE-201ENST00000254667 ADAP00813 363 aa18.08■□□□□ 0.49
PTPRE-201ENST00000254667 H2BFMP0C1H6 154 aa18.08■□□□□ 0.49
PTPRE-201ENST00000254667 PRSS56P0CW18 603 aa18.08■□□□□ 0.49
PTPRE-201ENST00000254667 CBLP22681 906 aa18.08■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms