RNA–Protein interactions for RNA: ENST00000252597.7

USHBP1-201, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USHBP1, Length 3,335 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-201ENST00000252597 SLC38A5Q8WUX1 472 aa11.38□□□□□ -0.59
USHBP1-201ENST00000252597 DEDD2Q8WXF8 326 aa11.38□□□□□ -0.59
USHBP1-201ENST00000252597 RELTQ969Z4 430 aa11.38□□□□□ -0.59
USHBP1-201ENST00000252597 PRAP1Q96NZ9 151 aa11.38□□□□□ -0.59
USHBP1-201ENST00000252597 FCRL4Q96PJ5 515 aa11.38□□□□□ -0.59
USHBP1-201ENST00000252597 MAPKAP1Q9BPZ7 522 aa11.38□□□□□ -0.59
USHBP1-201ENST00000252597 ZCCHC3Q9NUD5 404 aaKnown RBP11.38□□□□□ -0.59
USHBP1-201ENST00000252597 TXNL4BQ9NX01 149 aaKnown RBP11.38□□□□□ -0.59
USHBP1-201ENST00000252597 CCDC59Q9P031 241 aaKnown RBP11.38□□□□□ -0.59
USHBP1-201ENST00000252597 NDRG2Q9UN36 371 aaKnown RBP11.38□□□□□ -0.59
USHBP1-201ENST00000252597 RPL36Q9Y3U8 105 aaKnown RBP11.38□□□□□ -0.59
USHBP1-201ENST00000252597 CPSF4LA6NMK7 179 aaKnown RBP11.37□□□□□ -0.59
USHBP1-201ENST00000252597 H3BSH0 61 aa11.37□□□□□ -0.59
USHBP1-201ENST00000252597 HRO43593 1189 aa11.37□□□□□ -0.59
USHBP1-201ENST00000252597 EPHX1P07099 455 aa11.37□□□□□ -0.59
USHBP1-201ENST00000252597 CBSLP0DN79 551 aa11.37□□□□□ -0.59
USHBP1-201ENST00000252597 DDX5P17844 614 aaKnown RBP11.37□□□□□ -0.59
USHBP1-201ENST00000252597 CBSP35520 551 aa11.37□□□□□ -0.59
USHBP1-201ENST00000252597 GNG2P59768 71 aa11.37□□□□□ -0.59
USHBP1-201ENST00000252597 MRPL58Q14197 206 aaKnown RBP11.37□□□□□ -0.59
USHBP1-201ENST00000252597 PUM1Q14671 1186 aaKnown RBP eCLIP11.37□□□□□ -0.59
USHBP1-201ENST00000252597 ZNF750Q32MQ0 723 aa11.37□□□□□ -0.59
USHBP1-201ENST00000252597 FLYWCH1Q4VC44 716 aa11.37□□□□□ -0.59
USHBP1-201ENST00000252597 SLC30A6Q6NXT4 461 aa11.37□□□□□ -0.59
USHBP1-201ENST00000252597 NPAS4Q8IUM7 802 aa11.37□□□□□ -0.59
USHBP1-201ENST00000252597 OR8H3Q8N146 312 aa11.37□□□□□ -0.59
USHBP1-201ENST00000252597 DNAJC5GQ8N7S2 189 aa11.37□□□□□ -0.59
USHBP1-201ENST00000252597 SLC37A3Q8NCC5 494 aa11.37□□□□□ -0.59
USHBP1-201ENST00000252597 OR52E4Q8NGH9 312 aa11.37□□□□□ -0.59
USHBP1-201ENST00000252597 SMAP2Q8WU79 429 aaPredicted RBP11.37□□□□□ -0.59
USHBP1-201ENST00000252597 MND1Q9BWT6 205 aa11.37□□□□□ -0.59
USHBP1-201ENST00000252597 ZNF717Q9BY31 904 aaPredicted RBP11.37□□□□□ -0.59
USHBP1-201ENST00000252597 TMEM245Q9H330 911 aa11.37□□□□□ -0.59
USHBP1-201ENST00000252597 RNF121Q9H920 327 aa11.37□□□□□ -0.59
USHBP1-201ENST00000252597 ANKHQ9HCJ1 492 aa11.37□□□□□ -0.59
USHBP1-201ENST00000252597 STUB1Q9UNE7 303 aa11.37□□□□□ -0.59
USHBP1-201ENST00000252597 SLC30A4O14863 429 aa11.37□□□□□ -0.59
USHBP1-201ENST00000252597 OR2B3O76000 313 aa11.37□□□□□ -0.59
USHBP1-201ENST00000252597 CSF3P09919 207 aa11.37□□□□□ -0.59
USHBP1-201ENST00000252597 KIR2DL3P43628 341 aa11.37□□□□□ -0.59
USHBP1-201ENST00000252597 ACSM5Q6NUN0 579 aa11.37□□□□□ -0.59
USHBP1-201ENST00000252597 PHC2Q8IXK0 858 aa11.37□□□□□ -0.59
USHBP1-201ENST00000252597 ZNF614Q8N883 585 aa11.37□□□□□ -0.59
USHBP1-201ENST00000252597 C9orf43Q8TAL5 461 aaPredicted RBP11.37□□□□□ -0.59
USHBP1-201ENST00000252597 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.37□□□□□ -0.59
USHBP1-201ENST00000252597 SLC7A13Q8TCU3 470 aa11.37□□□□□ -0.59
USHBP1-201ENST00000252597 SLC7A6Q92536 515 aa11.37□□□□□ -0.59
USHBP1-201ENST00000252597 HCFC1R1Q9NWW0 138 aa11.37□□□□□ -0.59
USHBP1-201ENST00000252597 H2AFY2Q9P0M6 372 aaPredicted RBP11.37□□□□□ -0.59
USHBP1-201ENST00000252597 SEC14L4Q9UDX3 406 aa11.37□□□□□ -0.59
USHBP1-201ENST00000252597 GSTK1Q9Y2Q3 226 aa11.37□□□□□ -0.59
USHBP1-201ENST00000252597 DOCK6Q96HP0 2047 aa11.37□□□□□ -0.59
USHBP1-201ENST00000252597 URB1O60287 2271 aaKnown RBP11.37□□□□□ -0.59
USHBP1-201ENST00000252597 BTN3A3O00478 584 aa11.37□□□□□ -0.59
USHBP1-201ENST00000252597 PRMT3O60678 531 aa11.37□□□□□ -0.59
USHBP1-201ENST00000252597 POP4O95707 220 aaKnown RBP11.37□□□□□ -0.59
USHBP1-201ENST00000252597 CD9P21926 228 aa11.37□□□□□ -0.59
USHBP1-201ENST00000252597 HOXD10P28358 340 aa11.37□□□□□ -0.59
USHBP1-201ENST00000252597 IFNA8P32881 189 aa11.37□□□□□ -0.59
USHBP1-201ENST00000252597 METAP1P53582 386 aa11.37□□□□□ -0.59
USHBP1-201ENST00000252597 RBBP4Q09028 425 aa11.37□□□□□ -0.59
USHBP1-201ENST00000252597 KRT33BQ14525 404 aa11.37□□□□□ -0.59
USHBP1-201ENST00000252597 PRSS53Q2L4Q9 553 aa11.37□□□□□ -0.59
USHBP1-201ENST00000252597 SPIN4Q56A73 249 aa11.37□□□□□ -0.59
USHBP1-201ENST00000252597 C6orf120Q7Z4R8 191 aa11.37□□□□□ -0.59
USHBP1-201ENST00000252597 OR4K5Q8NGD3 323 aa11.37□□□□□ -0.59
USHBP1-201ENST00000252597 WDR20Q8TBZ3 569 aa11.37□□□□□ -0.59
USHBP1-201ENST00000252597 UBTD2Q8WUN7 234 aa11.37□□□□□ -0.59
USHBP1-201ENST00000252597 ING5Q8WYH8 240 aa11.37□□□□□ -0.59
USHBP1-201ENST00000252597 CCDC120Q96HB5 630 aa11.37□□□□□ -0.59
USHBP1-201ENST00000252597 BBS4Q96RK4 519 aa11.37□□□□□ -0.59
USHBP1-201ENST00000252597 BTNL2Q9UIR0 455 aa11.37□□□□□ -0.59
USHBP1-201ENST00000252597 KLK4Q9Y5K2 254 aa11.37□□□□□ -0.59
USHBP1-201ENST00000252597 CACNA1IQ9P0X4 2223 aa11.36□□□□□ -0.59
USHBP1-201ENST00000252597 TDRD15B5MCY1 1934 aaKnown RBP11.36□□□□□ -0.59
USHBP1-201ENST00000252597 K7ESM1 405 aa11.36□□□□□ -0.59
USHBP1-201ENST00000252597 FFAR1O14842 300 aa11.36□□□□□ -0.59
USHBP1-201ENST00000252597 SYPP08247 313 aa11.36□□□□□ -0.59
USHBP1-201ENST00000252597 CPN2P22792 545 aa11.36□□□□□ -0.59
USHBP1-201ENST00000252597 GPR1P46091 355 aa11.36□□□□□ -0.59
USHBP1-201ENST00000252597 POLR2LP62875 67 aaKnown RBP11.36□□□□□ -0.59
USHBP1-201ENST00000252597 GPR50Q13585 617 aa11.36□□□□□ -0.59
USHBP1-201ENST00000252597 TECPR1Q7Z6L1 1165 aa11.36□□□□□ -0.59
USHBP1-201ENST00000252597 ATCAYQ86WG3 371 aa11.36□□□□□ -0.59
USHBP1-201ENST00000252597 ZNF296Q8WUU4 475 aaPredicted RBP11.36□□□□□ -0.59
USHBP1-201ENST00000252597 RNFT2Q96EX2 444 aa11.36□□□□□ -0.59
USHBP1-201ENST00000252597 ASIC5Q9NY37 505 aa11.36□□□□□ -0.59
USHBP1-201ENST00000252597 MRPL15Q9P015 296 aaKnown RBP11.36□□□□□ -0.59
USHBP1-201ENST00000252597 SRRDQ9UH36 339 aa11.36□□□□□ -0.59
USHBP1-201ENST00000252597 ALG5Q9Y673 324 aa11.36□□□□□ -0.59
USHBP1-201ENST00000252597 WNT6Q9Y6F9 365 aa11.36□□□□□ -0.59
USHBP1-201ENST00000252597 ATG2BQ96BY7 2078 aa11.36□□□□□ -0.59
USHBP1-201ENST00000252597 C1orf226A1L170 272 aa11.36□□□□□ -0.59
USHBP1-201ENST00000252597 B4DXG7 233 aa11.36□□□□□ -0.59
USHBP1-201ENST00000252597 TEX46H3BTG2 121 aa11.36□□□□□ -0.59
USHBP1-201ENST00000252597 CAPN5O15484 640 aaPredicted RBP11.36□□□□□ -0.59
USHBP1-201ENST00000252597 OR1F1O43749 312 aa11.36□□□□□ -0.59
USHBP1-201ENST00000252597 OSMP13725 252 aa11.36□□□□□ -0.59
USHBP1-201ENST00000252597 SELPP16109 830 aa11.36□□□□□ -0.59
USHBP1-201ENST00000252597 RHCEP18577 417 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms