RNA–Protein interactions for RNA: ENST00000247833.11

RAB3IP-201, Transcript of RAB3A interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3IP, Length 3,690 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-201ENST00000247833 P2RX2Q9UBL9 471 aa11.97□□□□□ -0.49
RAB3IP-201ENST00000247833 PRKAG2Q9UGJ0 569 aa11.97□□□□□ -0.49
RAB3IP-201ENST00000247833 TBX21Q9UL17 535 aa11.97□□□□□ -0.49
RAB3IP-201ENST00000247833 RPL36Q9Y3U8 105 aaKnown RBP11.97□□□□□ -0.49
RAB3IP-201ENST00000247833 C1QTNF3-AMACRE9PGA6 284 aa11.96□□□□□ -0.49
RAB3IP-201ENST00000247833 MRPS14O60783 128 aaKnown RBP11.96□□□□□ -0.49
RAB3IP-201ENST00000247833 NR2F6P10588 404 aa11.96□□□□□ -0.49
RAB3IP-201ENST00000247833 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.96□□□□□ -0.49
RAB3IP-201ENST00000247833 CRTC2Q53ET0 693 aaPredicted RBP11.96□□□□□ -0.49
RAB3IP-201ENST00000247833 PYDC2Q56P42 97 aa11.96□□□□□ -0.49
RAB3IP-201ENST00000247833 PNCKQ6P2M8 343 aa11.96□□□□□ -0.49
RAB3IP-201ENST00000247833 ZNF547Q8IVP9 402 aa11.96□□□□□ -0.49
RAB3IP-201ENST00000247833 TMEM145Q8NBT3 493 aa11.96□□□□□ -0.49
RAB3IP-201ENST00000247833 GPR151Q8TDV0 419 aa11.96□□□□□ -0.49
RAB3IP-201ENST00000247833 TREX2Q9BQ50 279 aaPredicted RBP11.96□□□□□ -0.49
RAB3IP-201ENST00000247833 SMURF1Q9HCE7 757 aa11.96□□□□□ -0.49
RAB3IP-201ENST00000247833 NEUROD4Q9HD90 331 aa11.96□□□□□ -0.49
RAB3IP-201ENST00000247833 QPCTLQ9NXS2 382 aa11.96□□□□□ -0.49
RAB3IP-201ENST00000247833 CPSF4LA6NMK7 179 aaKnown RBP11.96□□□□□ -0.5
RAB3IP-201ENST00000247833 ISM1B1AKI9 464 aa11.96□□□□□ -0.5
RAB3IP-201ENST00000247833 TAF4O00268 1085 aa11.96□□□□□ -0.5
RAB3IP-201ENST00000247833 GPX5O75715 221 aa11.96□□□□□ -0.5
RAB3IP-201ENST00000247833 RB1P06400 928 aa11.96□□□□□ -0.5
RAB3IP-201ENST00000247833 FHP07954 510 aa11.96□□□□□ -0.5
RAB3IP-201ENST00000247833 SSTR4P31391 388 aa11.96□□□□□ -0.5
RAB3IP-201ENST00000247833 TNFSF8P32971 234 aa11.96□□□□□ -0.5
RAB3IP-201ENST00000247833 RCVRNP35243 200 aa11.96□□□□□ -0.5
RAB3IP-201ENST00000247833 LSM11P83369 360 aaKnown RBP eCLIP11.96□□□□□ -0.5
RAB3IP-201ENST00000247833 ZNF91Q05481 1191 aa11.96□□□□□ -0.5
RAB3IP-201ENST00000247833 ZNF77Q15935 545 aa11.96□□□□□ -0.5
RAB3IP-201ENST00000247833 ZNF730Q6ZMV8 503 aa11.96□□□□□ -0.5
RAB3IP-201ENST00000247833 SPRED2Q7Z698 418 aa11.96□□□□□ -0.5
RAB3IP-201ENST00000247833 OR4C15Q8NGM1 316 aa11.96□□□□□ -0.5
RAB3IP-201ENST00000247833 TEX47Q8TBZ9 253 aa11.96□□□□□ -0.5
RAB3IP-201ENST00000247833 SLC7A13Q8TCU3 470 aa11.96□□□□□ -0.5
RAB3IP-201ENST00000247833 LRIG1Q96JA1 1093 aa11.96□□□□□ -0.5
RAB3IP-201ENST00000247833 DPH7Q9BTV6 452 aa11.96□□□□□ -0.5
RAB3IP-201ENST00000247833 SGPP1Q9BX95 441 aa11.96□□□□□ -0.5
RAB3IP-201ENST00000247833 BEX2Q9BXY8 128 aa11.96□□□□□ -0.5
RAB3IP-201ENST00000247833 RHBGQ9H310 441 aa11.96□□□□□ -0.5
RAB3IP-201ENST00000247833 TMEM245Q9H330 911 aa11.96□□□□□ -0.5
RAB3IP-201ENST00000247833 TBC1D17Q9HA65 648 aa11.96□□□□□ -0.5
RAB3IP-201ENST00000247833 THSD1Q9NS62 852 aa11.96□□□□□ -0.5
RAB3IP-201ENST00000247833 ANKMY1Q9P2S6 941 aa11.96□□□□□ -0.5
RAB3IP-201ENST00000247833 COMMD3Q9UBI1 195 aa11.96□□□□□ -0.5
RAB3IP-201ENST00000247833 DNMT3AQ9Y6K1 912 aaPredicted RBP11.96□□□□□ -0.5
RAB3IP-201ENST00000247833 OR52A4PA6NMU1 304 aa11.96□□□□□ -0.5
RAB3IP-201ENST00000247833 HNRNPA0Q13151 305 aaKnown RBP11.96□□□□□ -0.5
RAB3IP-201ENST00000247833 NDUFAF5Q5TEU4 345 aa11.96□□□□□ -0.5
RAB3IP-201ENST00000247833 TCTN3Q6NUS6 607 aa11.96□□□□□ -0.5
RAB3IP-201ENST00000247833 PSRC1Q6PGN9 363 aaPredicted RBP11.96□□□□□ -0.5
RAB3IP-201ENST00000247833 ERN2Q76MJ5 926 aaKnown RBP11.96□□□□□ -0.5
RAB3IP-201ENST00000247833 GET4Q7L5D6 327 aaPredicted RBP11.96□□□□□ -0.5
RAB3IP-201ENST00000247833 C16orf62Q7Z3J2 963 aa11.96□□□□□ -0.5
RAB3IP-201ENST00000247833 LAS2Q8IYD9 372 aa11.96□□□□□ -0.5
RAB3IP-201ENST00000247833 NRSN1Q8IZ57 195 aa11.96□□□□□ -0.5
RAB3IP-201ENST00000247833 ZNF614Q8N883 585 aa11.96□□□□□ -0.5
RAB3IP-201ENST00000247833 AMER3Q8N944 861 aa11.96□□□□□ -0.5
RAB3IP-201ENST00000247833 TM4SF18Q96CE8 201 aa11.96□□□□□ -0.5
RAB3IP-201ENST00000247833 ITPKCQ96DU7 683 aa11.96□□□□□ -0.5
RAB3IP-201ENST00000247833 SIAEQ9HAT2 523 aa11.96□□□□□ -0.5
RAB3IP-201ENST00000247833 PLCXD1Q9NUJ7 323 aa11.96□□□□□ -0.5
RAB3IP-201ENST00000247833 MGAT4BQ9UQ53 548 aa11.96□□□□□ -0.5
RAB3IP-201ENST00000247833 PCYT1BQ9Y5K3 369 aaPredicted RBP11.96□□□□□ -0.5
RAB3IP-201ENST00000247833 TRPM6Q9BX84 2022 aa11.95□□□□□ -0.5
RAB3IP-201ENST00000247833 ISPDA4D126 451 aa11.95□□□□□ -0.5
RAB3IP-201ENST00000247833 HTR3EA5X5Y0 456 aa11.95□□□□□ -0.5
RAB3IP-201ENST00000247833 NPIPB8E9PQR5 432 aa11.95□□□□□ -0.5
RAB3IP-201ENST00000247833 IDH3BO43837 385 aa11.95□□□□□ -0.5
RAB3IP-201ENST00000247833 TMPRSS11DO60235 418 aa11.95□□□□□ -0.5
RAB3IP-201ENST00000247833 ADAP00813 363 aa11.95□□□□□ -0.5
RAB3IP-201ENST00000247833 CBLP22681 906 aa11.95□□□□□ -0.5
RAB3IP-201ENST00000247833 ELAVL4P26378 380 aaKnown RBP11.95□□□□□ -0.5
RAB3IP-201ENST00000247833 RORCP51449 518 aa11.95□□□□□ -0.5
RAB3IP-201ENST00000247833 SMIM11AP58511 58 aa11.95□□□□□ -0.5
RAB3IP-201ENST00000247833 ELAVL3Q14576 367 aaKnown RBP11.95□□□□□ -0.5
RAB3IP-201ENST00000247833 ZNF234Q14588 700 aa11.95□□□□□ -0.5
RAB3IP-201ENST00000247833 EIF4HQ15056 248 aaKnown RBP11.95□□□□□ -0.5
RAB3IP-201ENST00000247833 BCL7AQ4VC05 210 aa11.95□□□□□ -0.5
RAB3IP-201ENST00000247833 KIAA1161Q6NSJ0 714 aa11.95□□□□□ -0.5
RAB3IP-201ENST00000247833 CAMKMTQ7Z624 323 aa11.95□□□□□ -0.5
RAB3IP-201ENST00000247833 LHFPL3Q86UP9 236 aa11.95□□□□□ -0.5
RAB3IP-201ENST00000247833 LAPTM4BQ86VI4 370 aa11.95□□□□□ -0.5
RAB3IP-201ENST00000247833 LACC1Q8IV20 430 aa11.95□□□□□ -0.5
RAB3IP-201ENST00000247833 MRPL43Q8N983 215 aaKnown RBP11.95□□□□□ -0.5
RAB3IP-201ENST00000247833 OR2L2Q8NH16 312 aa11.95□□□□□ -0.5
RAB3IP-201ENST00000247833 VOPP1Q96AW1 172 aa11.95□□□□□ -0.5
RAB3IP-201ENST00000247833 C11orf24Q96F05 449 aaPredicted RBP11.95□□□□□ -0.5
RAB3IP-201ENST00000247833 HHIPQ96QV1 700 aa11.95□□□□□ -0.5
RAB3IP-201ENST00000247833 FAIM2Q9BWQ8 316 aa11.95□□□□□ -0.5
RAB3IP-201ENST00000247833 LGR4Q9BXB1 951 aa11.95□□□□□ -0.5
RAB3IP-201ENST00000247833 MVB12BQ9H7P6 319 aa11.95□□□□□ -0.5
RAB3IP-201ENST00000247833 CPNE5Q9HCH3 593 aa11.95□□□□□ -0.5
RAB3IP-201ENST00000247833 ANKHQ9HCJ1 492 aa11.95□□□□□ -0.5
RAB3IP-201ENST00000247833 GIMAP4Q9NUV9 329 aa11.95□□□□□ -0.5
RAB3IP-201ENST00000247833 EDDM13A0A1B0GTR0 161 aa11.95□□□□□ -0.5
RAB3IP-201ENST00000247833 TMEM229AB2RXF0 380 aa11.95□□□□□ -0.5
RAB3IP-201ENST00000247833 CSTF2P33240 577 aaKnown RBP eCLIP11.95□□□□□ -0.5
RAB3IP-201ENST00000247833 MAGEA8P43361 318 aa11.95□□□□□ -0.5
RAB3IP-201ENST00000247833 CAV3P56539 151 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms