RNA–Protein interactions for RNA: ENST00000234420.9

MSH6-201, Transcript of mutS homolog 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH6, Length 7,476 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-201ENST00000234420 CD8B2A6NJW9 211 aa10.66□□□□□ -0.7
MSH6-201ENST00000234420 H3BML4 177 aa10.66□□□□□ -0.7
MSH6-201ENST00000234420 KIAA0513O60268 411 aa10.66□□□□□ -0.7
MSH6-201ENST00000234420 PIP5K1CO60331 668 aa10.66□□□□□ -0.7
MSH6-201ENST00000234420 ERBB2P04626 1255 aa10.66□□□□□ -0.7
MSH6-201ENST00000234420 CD8BP10966 210 aa10.66□□□□□ -0.7
MSH6-201ENST00000234420 DESI1Q6ICB0 168 aa10.66□□□□□ -0.7
MSH6-201ENST00000234420 TIPARPQ7Z3E1 657 aaKnown RBP10.66□□□□□ -0.7
MSH6-201ENST00000234420 GALNT10Q86SR1 603 aa10.66□□□□□ -0.7
MSH6-201ENST00000234420 OR4K3Q96R72 315 aa10.66□□□□□ -0.7
MSH6-201ENST00000234420 MAF1Q9H063 256 aa10.66□□□□□ -0.7
MSH6-201ENST00000234420 HRASLS2Q9NWW9 162 aa10.66□□□□□ -0.7
MSH6-201ENST00000234420 TEX10Q9NXF1 929 aaPredicted RBP10.66□□□□□ -0.7
MSH6-201ENST00000234420 DCDC2BA2VCK2 349 aa10.66□□□□□ -0.7
MSH6-201ENST00000234420 MRPL3P09001 348 aaKnown RBP10.66□□□□□ -0.7
MSH6-201ENST00000234420 SLX4IPQ5VYV7 408 aa10.66□□□□□ -0.7
MSH6-201ENST00000234420 NIPAL3Q6P499 406 aa10.66□□□□□ -0.7
MSH6-201ENST00000234420 TMPRSS7Q7RTY8 843 aa10.66□□□□□ -0.7
MSH6-201ENST00000234420 FAM83FQ8NEG4 500 aaPredicted RBP10.66□□□□□ -0.7
MSH6-201ENST00000234420 ALG3Q92685 438 aa10.66□□□□□ -0.7
MSH6-201ENST00000234420 P2RY11Q96G91 374 aa10.66□□□□□ -0.7
MSH6-201ENST00000234420 CACNG6Q9BXT2 260 aa10.66□□□□□ -0.7
MSH6-201ENST00000234420 B4GALT7Q9UBV7 327 aa10.66□□□□□ -0.7
MSH6-201ENST00000234420 ERI3O43414 337 aaKnown RBP10.66□□□□□ -0.7
MSH6-201ENST00000234420 MFSD11O43934 449 aa10.66□□□□□ -0.7
MSH6-201ENST00000234420 GNAZP19086 355 aa10.66□□□□□ -0.7
MSH6-201ENST00000234420 BIDP55957 195 aa10.66□□□□□ -0.7
MSH6-201ENST00000234420 WNT3AP56704 352 aa10.66□□□□□ -0.7
MSH6-201ENST00000234420 DCUN1D3Q8IWE4 304 aa10.66□□□□□ -0.7
MSH6-201ENST00000234420 OR51I1Q9H343 314 aa10.66□□□□□ -0.7
MSH6-201ENST00000234420 PCDHGA5Q9Y5G8 931 aa10.66□□□□□ -0.7
MSH6-201ENST00000234420 A8MXE2 369 aa10.66□□□□□ -0.7
MSH6-201ENST00000234420 PDYNP01213 254 aa10.66□□□□□ -0.7
MSH6-201ENST00000234420 CRYBA1P05813 215 aa10.66□□□□□ -0.7
MSH6-201ENST00000234420 PTAFRP25105 342 aa10.66□□□□□ -0.7
MSH6-201ENST00000234420 BBS12Q6ZW61 710 aa10.66□□□□□ -0.7
MSH6-201ENST00000234420 ERN2Q76MJ5 926 aaKnown RBP10.66□□□□□ -0.7
MSH6-201ENST00000234420 PCED1BQ96HM7 432 aa10.66□□□□□ -0.7
MSH6-201ENST00000234420 BIRC8Q96P09 236 aa10.66□□□□□ -0.7
MSH6-201ENST00000234420 GCM1Q9NP62 436 aa10.66□□□□□ -0.7
MSH6-201ENST00000234420 MIOSQ9NXC5 875 aa10.66□□□□□ -0.7
MSH6-201ENST00000234420 PISDQ9UG56 409 aa10.66□□□□□ -0.7
MSH6-201ENST00000234420 EFCAB7A8K855 629 aa10.66□□□□□ -0.7
MSH6-201ENST00000234420 ARVCFO00192 962 aa10.66□□□□□ -0.7
MSH6-201ENST00000234420 FSCN2O14926 492 aa10.66□□□□□ -0.7
MSH6-201ENST00000234420 PIGRP01833 764 aa10.66□□□□□ -0.7
MSH6-201ENST00000234420 IL3P08700 152 aa10.66□□□□□ -0.7
MSH6-201ENST00000234420 MRPS5P82675 430 aaKnown RBP10.66□□□□□ -0.7
MSH6-201ENST00000234420 ZNF776Q68DI1 518 aaPredicted RBP10.66□□□□□ -0.7
MSH6-201ENST00000234420 MOB1BQ7L9L4 216 aa10.66□□□□□ -0.7
MSH6-201ENST00000234420 SVBPQ8N300 66 aa10.66□□□□□ -0.7
MSH6-201ENST00000234420 GLTPQ9NZD2 209 aa10.66□□□□□ -0.7
MSH6-201ENST00000234420 TAC3Q9UHF0 121 aa10.66□□□□□ -0.7
MSH6-201ENST00000234420 PNPLA6Q8IY17 1366 aa10.66□□□□□ -0.7
MSH6-201ENST00000234420 MAOAP21397 527 aa10.66□□□□□ -0.7
MSH6-201ENST00000234420 DEFB133Q30KQ1 61 aa10.66□□□□□ -0.7
MSH6-201ENST00000234420 ABHD17BQ5VST6 288 aa10.66□□□□□ -0.7
MSH6-201ENST00000234420 KDELC1Q6UW63 502 aa10.66□□□□□ -0.7
MSH6-201ENST00000234420 ZER1Q7Z7L7 766 aa10.66□□□□□ -0.7
MSH6-201ENST00000234420 UEVLDQ8IX04 471 aa10.66□□□□□ -0.7
MSH6-201ENST00000234420 ZNF454Q8N9F8 522 aa10.66□□□□□ -0.7
MSH6-201ENST00000234420 PCNPQ8WW12 178 aaKnown RBP10.66□□□□□ -0.7
MSH6-201ENST00000234420 SUCNR1Q9BXA5 334 aa10.66□□□□□ -0.7
MSH6-201ENST00000234420 LMAN1LQ9HAT1 526 aa10.66□□□□□ -0.7
MSH6-201ENST00000234420 CALML5Q9NZT1 146 aa10.66□□□□□ -0.7
MSH6-201ENST00000234420 TMEM184BQ9Y519 407 aaPredicted RBP10.66□□□□□ -0.7
MSH6-201ENST00000234420 NPHS1O60500 1241 aa10.65□□□□□ -0.7
MSH6-201ENST00000234420 KIAA0895LQ68EN5 471 aa10.65□□□□□ -0.7
MSH6-201ENST00000234420 TLDC1Q6P9B6 456 aa10.65□□□□□ -0.7
MSH6-201ENST00000234420 USP51Q70EK9 711 aa10.65□□□□□ -0.7
MSH6-201ENST00000234420 COX15Q7KZN9 410 aa10.65□□□□□ -0.7
MSH6-201ENST00000234420 SLC26A9Q7LBE3 791 aa10.65□□□□□ -0.7
MSH6-201ENST00000234420 CMTM8Q8IZV2 173 aa10.65□□□□□ -0.7
MSH6-201ENST00000234420 RSC1A1Q92681 617 aa10.65□□□□□ -0.7
MSH6-201ENST00000234420 TLCD1Q96CP7 247 aa10.65□□□□□ -0.7
MSH6-201ENST00000234420 MUS81Q96NY9 551 aa10.65□□□□□ -0.7
MSH6-201ENST00000234420 PTGES2Q9H7Z7 377 aa10.65□□□□□ -0.7
MSH6-201ENST00000234420 LSM5Q9Y4Y9 91 aaKnown RBP10.65□□□□□ -0.7
MSH6-201ENST00000234420 HSPB6O14558 160 aa10.65□□□□□ -0.7
MSH6-201ENST00000234420 HTRA2O43464 458 aaPredicted RBP10.65□□□□□ -0.7
MSH6-201ENST00000234420 DUSP11O75319 330 aaKnown RBP10.65□□□□□ -0.7
MSH6-201ENST00000234420 STK17BO94768 372 aa10.65□□□□□ -0.7
MSH6-201ENST00000234420 CHRM1P11229 460 aaPredicted RBP10.65□□□□□ -0.7
MSH6-201ENST00000234420 ERVFC1P60507 584 aa10.65□□□□□ -0.7
MSH6-201ENST00000234420 RPS14P62263 151 aaKnown RBP10.65□□□□□ -0.7
MSH6-201ENST00000234420 FKBP1BP68106 108 aa10.65□□□□□ -0.7
MSH6-201ENST00000234420 SLC35F1Q5T1Q4 408 aa10.65□□□□□ -0.7
MSH6-201ENST00000234420 NT5DC1Q5TFE4 455 aa10.65□□□□□ -0.7
MSH6-201ENST00000234420 LRRC38Q5VT99 294 aa10.65□□□□□ -0.7
MSH6-201ENST00000234420 KIAA1614Q5VZ46 1190 aa10.65□□□□□ -0.7
MSH6-201ENST00000234420 TOP6BLQ8N6T0 577 aa10.65□□□□□ -0.7
MSH6-201ENST00000234420 PSMG2Q969U7 264 aa10.65□□□□□ -0.7
MSH6-201ENST00000234420 C1orf21Q9H246 121 aa10.65□□□□□ -0.7
MSH6-201ENST00000234420 STUB1Q9UNE7 303 aa10.65□□□□□ -0.7
MSH6-201ENST00000234420 B3GALT1Q9Y5Z6 326 aa10.65□□□□□ -0.7
MSH6-201ENST00000234420 ADAM10O14672 748 aa10.65□□□□□ -0.7
MSH6-201ENST00000234420 PTBP3O95758 552 aaKnown RBP10.65□□□□□ -0.7
MSH6-201ENST00000234420 MT-ND5P03915 603 aa10.65□□□□□ -0.7
MSH6-201ENST00000234420 H1F0P07305 194 aaKnown RBP10.65□□□□□ -0.7
MSH6-201ENST00000234420 NRROSQ86YC3 692 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms