RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 SLCO1B7G3V0H7 640 aa10.53□□□□□ -0.72
SF3B6-201ENST00000233468 FGF17O60258 216 aa10.53□□□□□ -0.72
SF3B6-201ENST00000233468 ZFAND5O76080 213 aa10.53□□□□□ -0.72
SF3B6-201ENST00000233468 LINC00032P0C843 101 aa10.53□□□□□ -0.72
SF3B6-201ENST00000233468 GP1BBP13224 206 aa10.53□□□□□ -0.72
SF3B6-201ENST00000233468 CHN1P15882 459 aa10.53□□□□□ -0.72
SF3B6-201ENST00000233468 PCSK2P16519 638 aa10.53□□□□□ -0.72
SF3B6-201ENST00000233468 UQCRFS1P47985 274 aa10.53□□□□□ -0.72
SF3B6-201ENST00000233468 HNRNPFP52597 415 aaKnown RBP10.53□□□□□ -0.72
SF3B6-201ENST00000233468 EFNA3P52797 238 aa10.53□□□□□ -0.72
SF3B6-201ENST00000233468 Q0VFX4 171 aa10.53□□□□□ -0.72
SF3B6-201ENST00000233468 MAD2L1Q13257 205 aaPredicted RBP10.53□□□□□ -0.72
SF3B6-201ENST00000233468 MFAP5Q13361 173 aa10.53□□□□□ -0.72
SF3B6-201ENST00000233468 MEP1AQ16819 746 aa10.53□□□□□ -0.72
SF3B6-201ENST00000233468 TUSC1Q2TAM9 212 aa10.53□□□□□ -0.72
SF3B6-201ENST00000233468 ATP6AP1LQ52LC2 224 aa10.53□□□□□ -0.72
SF3B6-201ENST00000233468 SLC48A1Q6P1K1 146 aa10.53□□□□□ -0.72
SF3B6-201ENST00000233468 IKBIPQ70UQ0 350 aa10.53□□□□□ -0.72
SF3B6-201ENST00000233468 SHISA5Q8N114 240 aa10.53□□□□□ -0.72
SF3B6-201ENST00000233468 OR5L2Q8NGL0 311 aa10.53□□□□□ -0.72
SF3B6-201ENST00000233468 DNAJB14Q8TBM8 379 aa10.53□□□□□ -0.72
SF3B6-201ENST00000233468 AGR3Q8TD06 166 aa10.53□□□□□ -0.72
SF3B6-201ENST00000233468 ELP5Q8TE02 316 aa10.53□□□□□ -0.72
SF3B6-201ENST00000233468 ANKRD9Q96BM1 317 aaPredicted RBP10.53□□□□□ -0.72
SF3B6-201ENST00000233468 TM4SF18Q96CE8 201 aa10.53□□□□□ -0.72
SF3B6-201ENST00000233468 PSMG3-AS1Q96PY0 264 aa10.53□□□□□ -0.72
SF3B6-201ENST00000233468 DEFB126Q9BYW3 111 aa10.53□□□□□ -0.72
SF3B6-201ENST00000233468 MANSC1Q9H8J5 431 aa10.53□□□□□ -0.72
SF3B6-201ENST00000233468 MIEF1Q9NQG6 463 aa10.53□□□□□ -0.72
SF3B6-201ENST00000233468 TEX10Q9NXF1 929 aaPredicted RBP10.53□□□□□ -0.72
SF3B6-201ENST00000233468 STMN3Q9NZ72 180 aa10.53□□□□□ -0.72
SF3B6-201ENST00000233468 EHD3Q9NZN3 535 aa10.53□□□□□ -0.72
SF3B6-201ENST00000233468 ZDHHC2Q9UIJ5 367 aa10.53□□□□□ -0.72
SF3B6-201ENST00000233468 PPIEQ9UNP9 301 aaKnown RBP10.53□□□□□ -0.72
SF3B6-201ENST00000233468 DLGAP4Q9Y2H0 992 aa10.53□□□□□ -0.72
SF3B6-201ENST00000233468 CACNA1DQ01668 2161 aa10.53□□□□□ -0.72
SF3B6-201ENST00000233468 ESPL1Q14674 2120 aa10.52□□□□□ -0.72
SF3B6-201ENST00000233468 GLOD5A6NK44 160 aa10.52□□□□□ -0.73
SF3B6-201ENST00000233468 FCHO1O14526 889 aa10.52□□□□□ -0.73
SF3B6-201ENST00000233468 PIP5K1BO14986 540 aa10.52□□□□□ -0.73
SF3B6-201ENST00000233468 ATP8B1O43520 1251 aa10.52□□□□□ -0.73
SF3B6-201ENST00000233468 VPS4BO75351 444 aa10.52□□□□□ -0.73
SF3B6-201ENST00000233468 ITGAMP11215 1152 aa10.52□□□□□ -0.73
SF3B6-201ENST00000233468 PORP16435 677 aaPredicted RBP10.52□□□□□ -0.73
SF3B6-201ENST00000233468 CSNK2A2P19784 350 aaPredicted RBP10.52□□□□□ -0.73
SF3B6-201ENST00000233468 RPL3P39023 403 aaKnown RBP10.52□□□□□ -0.73
SF3B6-201ENST00000233468 ASMTP46597 345 aa10.52□□□□□ -0.73
SF3B6-201ENST00000233468 ALDH9A1P49189 494 aa10.52□□□□□ -0.73
SF3B6-201ENST00000233468 XKP51811 444 aa10.52□□□□□ -0.73
SF3B6-201ENST00000233468 WDR4P57081 412 aaKnown RBP10.52□□□□□ -0.73
SF3B6-201ENST00000233468 ARG2P78540 354 aa10.52□□□□□ -0.73
SF3B6-201ENST00000233468 BST1Q10588 318 aa10.52□□□□□ -0.73
SF3B6-201ENST00000233468 SMU1Q2TAY7 513 aa10.52□□□□□ -0.73
SF3B6-201ENST00000233468 UGT3A2Q3SY77 523 aa10.52□□□□□ -0.73
SF3B6-201ENST00000233468 NOXRED1Q6NXP6 359 aa10.52□□□□□ -0.73
SF3B6-201ENST00000233468 IGFL2Q6UWQ7 119 aa10.52□□□□□ -0.73
SF3B6-201ENST00000233468 HSDL2Q6YN16 418 aa10.52□□□□□ -0.73
SF3B6-201ENST00000233468 OR4N5Q8IXE1 308 aa10.52□□□□□ -0.73
SF3B6-201ENST00000233468 FAM9CQ8IZT9 166 aa10.52□□□□□ -0.73
SF3B6-201ENST00000233468 SIRT6Q8N6T7 355 aa10.52□□□□□ -0.73
SF3B6-201ENST00000233468 HORMAD2Q8N7B1 307 aa10.52□□□□□ -0.73
SF3B6-201ENST00000233468 OR1N1Q8NGS0 311 aa10.52□□□□□ -0.73
SF3B6-201ENST00000233468 OR8K3Q8NH51 312 aa10.52□□□□□ -0.73
SF3B6-201ENST00000233468 SUN3Q8TAQ9 357 aa10.52□□□□□ -0.73
SF3B6-201ENST00000233468 C16orf78Q8WTQ4 265 aa10.52□□□□□ -0.73
SF3B6-201ENST00000233468 RIT1Q92963 219 aa10.52□□□□□ -0.73
SF3B6-201ENST00000233468 KLHL29Q96CT2 875 aa10.52□□□□□ -0.73
SF3B6-201ENST00000233468 C19orf60Q96EN9 201 aa10.52□□□□□ -0.73
SF3B6-201ENST00000233468 C11orf24Q96F05 449 aaPredicted RBP10.52□□□□□ -0.73
SF3B6-201ENST00000233468 MESP1Q9BRJ9 268 aa10.52□□□□□ -0.73
SF3B6-201ENST00000233468 OR8D2Q9GZM6 311 aa10.52□□□□□ -0.73
SF3B6-201ENST00000233468 RNF32Q9H0A6 362 aa10.52□□□□□ -0.73
SF3B6-201ENST00000233468 TNFRSF12AQ9NP84 129 aa10.52□□□□□ -0.73
SF3B6-201ENST00000233468 UTS2RQ9UKP6 389 aa10.52□□□□□ -0.73
SF3B6-201ENST00000233468 ENTPD4Q9Y227 616 aa10.52□□□□□ -0.73
SF3B6-201ENST00000233468 EIF3LQ9Y262 564 aaKnown RBP10.52□□□□□ -0.73
SF3B6-201ENST00000233468 CELSR2Q9HCU4 2923 aa10.52□□□□□ -0.73
SF3B6-201ENST00000233468 ITPR2Q14571 2701 aa10.52□□□□□ -0.73
SF3B6-201ENST00000233468 MDC1Q14676 2089 aaKnown RBP10.51□□□□□ -0.73
SF3B6-201ENST00000233468 TRBV11-1A0A0K0K1C0 115 aa10.51□□□□□ -0.73
SF3B6-201ENST00000233468 TRPC5OSA6NMA1 111 aa10.51□□□□□ -0.73
SF3B6-201ENST00000233468 TMEM233B4DJY2 109 aa10.51□□□□□ -0.73
SF3B6-201ENST00000233468 MASP2O00187 686 aa10.51□□□□□ -0.73
SF3B6-201ENST00000233468 KLF11O14901 512 aa10.51□□□□□ -0.73
SF3B6-201ENST00000233468 PGRMC2O15173 223 aa10.51□□□□□ -0.73
SF3B6-201ENST00000233468 ERAL1O75616 437 aaKnown RBP10.51□□□□□ -0.73
SF3B6-201ENST00000233468 IL3P08700 152 aa10.51□□□□□ -0.73
SF3B6-201ENST00000233468 CPMP14384 443 aa10.51□□□□□ -0.73
SF3B6-201ENST00000233468 DDCP20711 480 aa10.51□□□□□ -0.73
SF3B6-201ENST00000233468 MPIP34949 423 aa10.51□□□□□ -0.73
SF3B6-201ENST00000233468 SOX11P35716 441 aa10.51□□□□□ -0.73
SF3B6-201ENST00000233468 HK2P52789 917 aa10.51□□□□□ -0.73
SF3B6-201ENST00000233468 PPP2R2AP63151 447 aa10.51□□□□□ -0.73
SF3B6-201ENST00000233468 RPL38P63173 70 aaKnown RBP10.51□□□□□ -0.73
SF3B6-201ENST00000233468 RAE1P78406 368 aaKnown RBP10.51□□□□□ -0.73
SF3B6-201ENST00000233468 ID2Q02363 134 aa10.51□□□□□ -0.73
SF3B6-201ENST00000233468 C2orf80Q0P641 193 aa10.51□□□□□ -0.73
SF3B6-201ENST00000233468 TLR1Q15399 786 aa10.51□□□□□ -0.73
SF3B6-201ENST00000233468 SPRED3Q2MJR0 410 aa10.51□□□□□ -0.73
SF3B6-201ENST00000233468 GALNTL6Q49A17 601 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms