RNA–Protein interactions for RNA: ENST00000228918.8

LTBR-201, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBR, Length 2,260 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-201ENST00000228918 CEP19Q96LK0 163 aa15.43■□□□□ 0.06
LTBR-201ENST00000228918 TEFMQ96QE5 360 aaKnown RBP15.43■□□□□ 0.06
LTBR-201ENST00000228918 AIF1LQ9BQI0 150 aa15.43■□□□□ 0.06
LTBR-201ENST00000228918 CNPPD1Q9BV87 410 aa15.43■□□□□ 0.06
LTBR-201ENST00000228918 ASPNQ9BXN1 380 aa15.43■□□□□ 0.06
LTBR-201ENST00000228918 NDEL1Q9GZM8 345 aa15.43■□□□□ 0.06
LTBR-201ENST00000228918 POLR2J3Q9H1A7 115 aaKnown RBP15.43■□□□□ 0.06
LTBR-201ENST00000228918 LHX9Q9NQ69 397 aa15.43■□□□□ 0.06
LTBR-201ENST00000228918 WASH6PQ9NQA3 447 aa15.43■□□□□ 0.06
LTBR-201ENST00000228918 FBXL12Q9NXK8 326 aa15.43■□□□□ 0.06
LTBR-201ENST00000228918 TRAPPC4Q9Y296 219 aa15.43■□□□□ 0.06
LTBR-201ENST00000228918 A8MU76 341 aa15.42■□□□□ 0.06
LTBR-201ENST00000228918 SH3BP5O60239 455 aa15.42■□□□□ 0.06
LTBR-201ENST00000228918 TP53P04637 393 aaPredicted RBP15.42■□□□□ 0.06
LTBR-201ENST00000228918 C9orf64Q5T6V5 341 aa15.42■□□□□ 0.06
LTBR-201ENST00000228918 MFSD4BQ5TF39 518 aa15.42■□□□□ 0.06
LTBR-201ENST00000228918 GDPGP1Q6ZNW5 385 aa15.42■□□□□ 0.06
LTBR-201ENST00000228918 KRT73Q86Y46 540 aa15.42■□□□□ 0.06
LTBR-201ENST00000228918 CACTIN-AS1Q8N1I8 211 aa15.42■□□□□ 0.06
LTBR-201ENST00000228918 FLCNQ8NFG4 579 aa15.42■□□□□ 0.06
LTBR-201ENST00000228918 RASSF5Q8WWW0 418 aa15.42■□□□□ 0.06
LTBR-201ENST00000228918 ING5Q8WYH8 240 aa15.42■□□□□ 0.06
LTBR-201ENST00000228918 EXOSC8Q96B26 276 aaKnown RBP15.42■□□□□ 0.06
LTBR-201ENST00000228918 LRRC3BQ96PB8 259 aa15.42■□□□□ 0.06
LTBR-201ENST00000228918 MND1Q9BWT6 205 aa15.42■□□□□ 0.06
LTBR-201ENST00000228918 HOXD1Q9GZZ0 328 aa15.42■□□□□ 0.06
LTBR-201ENST00000228918 RPL36Q9Y3U8 105 aaKnown RBP15.42■□□□□ 0.06
LTBR-201ENST00000228918 SNX11Q9Y5W9 270 aa15.42■□□□□ 0.06
LTBR-201ENST00000228918 DENND4AQ7Z401 1863 aa15.42■□□□□ 0.06
LTBR-201ENST00000228918 RGS13O14921 159 aa15.42■□□□□ 0.06
LTBR-201ENST00000228918 DYRK3O43781 588 aa15.42■□□□□ 0.06
LTBR-201ENST00000228918 SLITRK5O94991 958 aa15.42■□□□□ 0.06
LTBR-201ENST00000228918 DDX5P17844 614 aaKnown RBP15.42■□□□□ 0.06
LTBR-201ENST00000228918 TNFSF8P32971 234 aa15.42■□□□□ 0.06
LTBR-201ENST00000228918 RPS19P39019 145 aaKnown RBP15.42■□□□□ 0.06
LTBR-201ENST00000228918 REEP5Q00765 189 aa15.42■□□□□ 0.06
LTBR-201ENST00000228918 RPA4Q13156 261 aa15.42■□□□□ 0.06
LTBR-201ENST00000228918 RNLSQ5VYX0 342 aa15.42■□□□□ 0.06
LTBR-201ENST00000228918 TRIM69Q86WT6 500 aa15.42■□□□□ 0.06
LTBR-201ENST00000228918 NUDT13Q86X67 352 aa15.42■□□□□ 0.06
LTBR-201ENST00000228918 CELF2-AS1Q8N7Q2 184 aa15.42■□□□□ 0.06
LTBR-201ENST00000228918 SLC7A13Q8TCU3 470 aa15.42■□□□□ 0.06
LTBR-201ENST00000228918 OR8D1Q8WZ84 308 aa15.42■□□□□ 0.06
LTBR-201ENST00000228918 TFGQ92734 400 aaPredicted RBP15.42■□□□□ 0.06
LTBR-201ENST00000228918 ZBED6CLQ96FA7 236 aaPredicted RBP15.42■□□□□ 0.06
LTBR-201ENST00000228918 TRMT61AQ96FX7 289 aaKnown RBP15.42■□□□□ 0.06
LTBR-201ENST00000228918 ZNF764Q96H86 408 aaPredicted RBP15.42■□□□□ 0.06
LTBR-201ENST00000228918 ZNF607Q96SK3 696 aa15.42■□□□□ 0.06
LTBR-201ENST00000228918 TSSK6Q9BXA6 273 aa15.42■□□□□ 0.06
LTBR-201ENST00000228918 BARHL1Q9BZE3 327 aa15.42■□□□□ 0.06
LTBR-201ENST00000228918 NDUFB11Q9NX14 153 aa15.42■□□□□ 0.06
LTBR-201ENST00000228918 ERVK13-1Q9NX77 482 aa15.42■□□□□ 0.06
LTBR-201ENST00000228918 SEC14L4Q9UDX3 406 aa15.42■□□□□ 0.06
LTBR-201ENST00000228918 SEC14L3Q9UDX4 400 aa15.42■□□□□ 0.06
LTBR-201ENST00000228918 A4GNTQ9UNA3 340 aa15.42■□□□□ 0.06
LTBR-201ENST00000228918 SLC27A6Q9Y2P4 619 aa15.42■□□□□ 0.06
LTBR-201ENST00000228918 COL4A3Q01955 1670 aa15.41■□□□□ 0.06
LTBR-201ENST00000228918 PRAMEF27A3QJZ7 478 aa15.41■□□□□ 0.06
LTBR-201ENST00000228918 HEPACAM2A8MVW5 462 aa15.41■□□□□ 0.06
LTBR-201ENST00000228918 PRRT4C9JH25 899 aa15.41■□□□□ 0.06
LTBR-201ENST00000228918 SLC28A2O43868 658 aa15.41■□□□□ 0.06
LTBR-201ENST00000228918 SSX4O60224 188 aa15.41■□□□□ 0.06
LTBR-201ENST00000228918 TMPRSS11DO60235 418 aa15.41■□□□□ 0.06
LTBR-201ENST00000228918 APOA1P02647 267 aa15.41■□□□□ 0.06
LTBR-201ENST00000228918 HBQ1P09105 142 aa15.41■□□□□ 0.06
LTBR-201ENST00000228918 CEBPBP17676 345 aa15.41■□□□□ 0.06
LTBR-201ENST00000228918 CXCR2P25025 360 aa15.41■□□□□ 0.06
LTBR-201ENST00000228918 TIE1P35590 1138 aa15.41■□□□□ 0.06
LTBR-201ENST00000228918 CRYBB2P43320 205 aa15.41■□□□□ 0.06
LTBR-201ENST00000228918 ARHGAP19Q14CB8 494 aa15.41■□□□□ 0.06
LTBR-201ENST00000228918 OCLNQ16625 522 aa15.41■□□□□ 0.06
LTBR-201ENST00000228918 HNRNPA1L2Q32P51 320 aaKnown RBP15.41■□□□□ 0.06
LTBR-201ENST00000228918 SPATC1Q76KD6 591 aa15.41■□□□□ 0.06
LTBR-201ENST00000228918 NANOGP1Q8N7R0 232 aa15.41■□□□□ 0.06
LTBR-201ENST00000228918 TCEANCQ8N8B7 351 aa15.41■□□□□ 0.06
LTBR-201ENST00000228918 ST13P5Q8NFI4 369 aaPredicted RBP15.41■□□□□ 0.06
LTBR-201ENST00000228918 QRFPRQ96P65 431 aa15.41■□□□□ 0.06
LTBR-201ENST00000228918 TREX2Q9BQ50 279 aaPredicted RBP15.41■□□□□ 0.06
LTBR-201ENST00000228918 MOV10Q9HCE1 1003 aaKnown RBP15.41■□□□□ 0.06
LTBR-201ENST00000228918 C14orf119Q9NWQ9 140 aa15.41■□□□□ 0.06
LTBR-201ENST00000228918 TEX10Q9NXF1 929 aaPredicted RBP15.41■□□□□ 0.06
LTBR-201ENST00000228918 STUB1Q9UNE7 303 aa15.41■□□□□ 0.06
LTBR-201ENST00000228918 MKI67P46013 3256 aaKnown RBP15.41■□□□□ 0.06
LTBR-201ENST00000228918 HEATR5BQ9P2D3 2071 aa15.41■□□□□ 0.06
LTBR-201ENST00000228918 FEZF1A0PJY2 475 aa15.41■□□□□ 0.06
LTBR-201ENST00000228918 ANKRD34BA5PLL1 514 aa15.41■□□□□ 0.06
LTBR-201ENST00000228918 H3BQ06 376 aaPredicted RBP15.41■□□□□ 0.06
LTBR-201ENST00000228918 HOXC11O43248 304 aaPredicted RBP15.41■□□□□ 0.06
LTBR-201ENST00000228918 UGT2B17O75795 530 aa15.41■□□□□ 0.06
LTBR-201ENST00000228918 PSMB5P28074 263 aa15.41■□□□□ 0.06
LTBR-201ENST00000228918 CCT3P49368 545 aaKnown RBP15.41■□□□□ 0.06
LTBR-201ENST00000228918 SMIM11AP58511 58 aa15.41■□□□□ 0.06
LTBR-201ENST00000228918 TARDBPQ13148 414 aaKnown RBP eCLIP15.41■□□□□ 0.06
LTBR-201ENST00000228918 FNDC3BQ53EP0 1204 aaKnown RBP15.41■□□□□ 0.06
LTBR-201ENST00000228918 TMC5Q6UXY8 1006 aa15.41■□□□□ 0.06
LTBR-201ENST00000228918 ERN2Q76MJ5 926 aaKnown RBP15.41■□□□□ 0.06
LTBR-201ENST00000228918 VASH1Q7L8A9 365 aaPredicted RBP15.41■□□□□ 0.06
LTBR-201ENST00000228918 BCDIN3DQ7Z5W3 292 aaKnown RBP15.41■□□□□ 0.06
LTBR-201ENST00000228918 COMTD1Q86VU5 262 aa15.41■□□□□ 0.06
LTBR-201ENST00000228918 AMZ2Q86W34 360 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms