RNA–Protein interactions for RNA: ENST00000225519.3

SHPK-201, Transcript of sedoheptulokinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHPK, Length 3,838 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPK-201ENST00000225519 HEPACAM2A8MVW5 462 aa13.53□□□□□ -0.24
SHPK-201ENST00000225519 SSNA1O43805 119 aa13.53□□□□□ -0.24
SHPK-201ENST00000225519 MTX2O75431 263 aa13.53□□□□□ -0.24
SHPK-201ENST00000225519 GJB5O95377 273 aa13.53□□□□□ -0.24
SHPK-201ENST00000225519 DSTNP60981 165 aa13.53□□□□□ -0.24
SHPK-201ENST00000225519 RPS13P62277 151 aaKnown RBP13.53□□□□□ -0.24
SHPK-201ENST00000225519 RPS26P62854 115 aaKnown RBP13.53□□□□□ -0.24
SHPK-201ENST00000225519 GPR176Q14439 515 aa13.53□□□□□ -0.24
SHPK-201ENST00000225519 TAF12Q16514 161 aa13.53□□□□□ -0.24
SHPK-201ENST00000225519 ZXDCQ2QGD7 858 aaPredicted RBP13.53□□□□□ -0.24
SHPK-201ENST00000225519 ZNF385BQ569K4 471 aa13.53□□□□□ -0.24
SHPK-201ENST00000225519 LIPJQ5W064 366 aa13.53□□□□□ -0.24
SHPK-201ENST00000225519 FAM180BQ6P0A1 224 aa13.53□□□□□ -0.24
SHPK-201ENST00000225519 GPR155Q7Z3F1 870 aa13.53□□□□□ -0.24
SHPK-201ENST00000225519 TSPAN33Q86UF1 283 aa13.53□□□□□ -0.24
SHPK-201ENST00000225519 HUS1BQ8NHY5 278 aa13.53□□□□□ -0.24
SHPK-201ENST00000225519 SAMD11Q96NU1 681 aa13.53□□□□□ -0.24
SHPK-201ENST00000225519 ZDHHC3Q9NYG2 299 aa13.53□□□□□ -0.24
SHPK-201ENST00000225519 ELF5Q9UKW6 265 aaPredicted RBP13.53□□□□□ -0.24
SHPK-201ENST00000225519 DIMT1Q9UNQ2 313 aaKnown RBP13.53□□□□□ -0.24
SHPK-201ENST00000225519 GSAPA4D1B5 854 aa13.52□□□□□ -0.24
SHPK-201ENST00000225519 CD8B2A6NJW9 211 aa13.52□□□□□ -0.24
SHPK-201ENST00000225519 RNASET2O00584 256 aaKnown RBP13.52□□□□□ -0.24
SHPK-201ENST00000225519 GAPDHSO14556 408 aaPredicted RBP13.52□□□□□ -0.24
SHPK-201ENST00000225519 TOXO94900 526 aa13.52□□□□□ -0.24
SHPK-201ENST00000225519 ETHE1O95571 254 aa13.52□□□□□ -0.24
SHPK-201ENST00000225519 BCHEP06276 602 aa13.52□□□□□ -0.24
SHPK-201ENST00000225519 CD8BP10966 210 aa13.52□□□□□ -0.24
SHPK-201ENST00000225519 HSF2Q03933 536 aa13.52□□□□□ -0.24
SHPK-201ENST00000225519 OTOP2Q7RTS6 562 aa13.52□□□□□ -0.24
SHPK-201ENST00000225519 DDX53Q86TM3 631 aaKnown RBP13.52□□□□□ -0.24
SHPK-201ENST00000225519 VRK3Q8IV63 474 aa13.52□□□□□ -0.24
SHPK-201ENST00000225519 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.52□□□□□ -0.24
SHPK-201ENST00000225519 SLC9A6Q92581 669 aa13.52□□□□□ -0.24
SHPK-201ENST00000225519 RNFT2Q96EX2 444 aa13.52□□□□□ -0.24
SHPK-201ENST00000225519 HHIPQ96QV1 700 aa13.52□□□□□ -0.24
SHPK-201ENST00000225519 SMAD5Q99717 465 aaKnown RBP13.52□□□□□ -0.24
SHPK-201ENST00000225519 NLNQ9BYT8 704 aa13.52□□□□□ -0.24
SHPK-201ENST00000225519 SERHL2Q9H4I8 314 aa13.52□□□□□ -0.24
SHPK-201ENST00000225519 REEP4Q9H6H4 257 aa13.52□□□□□ -0.24
SHPK-201ENST00000225519 BRD9Q9H8M2 597 aa13.52□□□□□ -0.24
SHPK-201ENST00000225519 CTPS2Q9NRF8 586 aa13.52□□□□□ -0.24
SHPK-201ENST00000225519 CDH10Q9Y6N8 788 aa13.52□□□□□ -0.24
SHPK-201ENST00000225519 CHP2O43745 196 aa13.52□□□□□ -0.25
SHPK-201ENST00000225519 TIA1P31483 386 aaKnown RBP eCLIP13.52□□□□□ -0.25
SHPK-201ENST00000225519 ATN1P54259 1190 aaPredicted RBP13.52□□□□□ -0.25
SHPK-201ENST00000225519 DBPQ10586 325 aaPredicted RBP13.52□□□□□ -0.25
SHPK-201ENST00000225519 BTN1A1Q13410 526 aa13.52□□□□□ -0.25
SHPK-201ENST00000225519 AANATQ16613 207 aa13.52□□□□□ -0.25
SHPK-201ENST00000225519 METAP1DQ6UB28 335 aaPredicted RBP13.52□□□□□ -0.25
SHPK-201ENST00000225519 CXCL17Q6UXB2 119 aa13.52□□□□□ -0.25
SHPK-201ENST00000225519 HDDC2Q7Z4H3 204 aa13.52□□□□□ -0.25
SHPK-201ENST00000225519 MRPL10Q7Z7H8 261 aaKnown RBP13.52□□□□□ -0.25
SHPK-201ENST00000225519 RIT1Q92963 219 aa13.52□□□□□ -0.25
SHPK-201ENST00000225519 CAPNS2Q96L46 248 aa13.52□□□□□ -0.25
SHPK-201ENST00000225519 SLC6A18Q96N87 628 aa13.52□□□□□ -0.25
SHPK-201ENST00000225519 MIEF1Q9NQG6 463 aa13.52□□□□□ -0.25
SHPK-201ENST00000225519 GPATCH2Q9NW75 528 aa13.52□□□□□ -0.25
SHPK-201ENST00000225519 PTGFRNQ9P2B2 879 aa13.52□□□□□ -0.25
SHPK-201ENST00000225519 A0A0U1RQF3 1178 aa13.52□□□□□ -0.25
SHPK-201ENST00000225519 EEF1E1O43324 174 aaKnown RBP13.52□□□□□ -0.25
SHPK-201ENST00000225519 TBL1XO60907 577 aa13.52□□□□□ -0.25
SHPK-201ENST00000225519 ENPP1P22413 925 aa13.52□□□□□ -0.25
SHPK-201ENST00000225519 DNASE1P24855 282 aa13.52□□□□□ -0.25
SHPK-201ENST00000225519 SLC6A12P48065 614 aa13.52□□□□□ -0.25
SHPK-201ENST00000225519 DGKGP49619 791 aa13.52□□□□□ -0.25
SHPK-201ENST00000225519 HMGA2P52926 109 aa13.52□□□□□ -0.25
SHPK-201ENST00000225519 MGAT3Q09327 533 aa13.52□□□□□ -0.25
SHPK-201ENST00000225519 SEC23BQ15437 767 aa13.52□□□□□ -0.25
SHPK-201ENST00000225519 GRK1Q15835 563 aa13.52□□□□□ -0.25
SHPK-201ENST00000225519 NTRK2Q16620 822 aa13.52□□□□□ -0.25
SHPK-201ENST00000225519 CDKL4Q5MAI5 379 aa13.52□□□□□ -0.25
SHPK-201ENST00000225519 TMEM65Q6PI78 240 aa13.52□□□□□ -0.25
SHPK-201ENST00000225519 ARSKQ6UWY0 536 aa13.52□□□□□ -0.25
SHPK-201ENST00000225519 UNC5DQ6UXZ4 953 aa13.52□□□□□ -0.25
SHPK-201ENST00000225519 CEACAM20Q6UY09 585 aa13.52□□□□□ -0.25
SHPK-201ENST00000225519 PIAS4Q8N2W9 510 aaPredicted RBP13.52□□□□□ -0.25
SHPK-201ENST00000225519 MARVELD3Q96A59 401 aa13.52□□□□□ -0.25
SHPK-201ENST00000225519 RFT1Q96AA3 541 aa13.52□□□□□ -0.25
SHPK-201ENST00000225519 BEX1Q9HBH7 125 aa13.52□□□□□ -0.25
SHPK-201ENST00000225519 LHX3Q9UBR4 397 aa13.52□□□□□ -0.25
SHPK-201ENST00000225519 MRPS7Q9Y2R9 242 aaKnown RBP13.52□□□□□ -0.25
SHPK-201ENST00000225519 GPR52Q9Y2T5 361 aa13.52□□□□□ -0.25
SHPK-201ENST00000225519 A0A1W2PRB8 838 aa13.51□□□□□ -0.25
SHPK-201ENST00000225519 PAHP00439 452 aa13.51□□□□□ -0.25
SHPK-201ENST00000225519 EXOSC2Q13868 293 aaKnown RBP13.51□□□□□ -0.25
SHPK-201ENST00000225519 CRB2Q5IJ48 1285 aa13.51□□□□□ -0.25
SHPK-201ENST00000225519 CXorf57Q6NSI4 855 aaKnown RBP13.51□□□□□ -0.25
SHPK-201ENST00000225519 REEP3Q6NUK4 255 aa13.51□□□□□ -0.25
SHPK-201ENST00000225519 BRAT1Q6PJG6 821 aa13.51□□□□□ -0.25
SHPK-201ENST00000225519 ASB11Q8WXH4 323 aa13.51□□□□□ -0.25
SHPK-201ENST00000225519 CDCP1Q9H5V8 836 aa13.51□□□□□ -0.25
SHPK-201ENST00000225519 NT5DC2Q9H857 520 aa13.51□□□□□ -0.25
SHPK-201ENST00000225519 MRPL39Q9NYK5 338 aaKnown RBP13.51□□□□□ -0.25
SHPK-201ENST00000225519 SRRDQ9UH36 339 aa13.51□□□□□ -0.25
SHPK-201ENST00000225519 A0A1W2PRG6 482 aa13.51□□□□□ -0.25
SHPK-201ENST00000225519 HNRNPCL2B2RXH8 293 aa13.51□□□□□ -0.25
SHPK-201ENST00000225519 GTPBP1O00178 669 aaKnown RBP13.51□□□□□ -0.25
SHPK-201ENST00000225519 CD22P20273 847 aa13.51□□□□□ -0.25
SHPK-201ENST00000225519 LIM2P55344 173 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms