RNA–Protein interactions for RNA: ENST00000222214.9

GCDH-201, Transcript of glutaryl-CoA dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCDH, Length 1,956 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-201ENST00000222214 POFUT2Q9Y2G5 429 aa16.66■□□□□ 0.26
GCDH-201ENST00000222214 A0A0J9YY10 115 aa16.65■□□□□ 0.26
GCDH-201ENST00000222214 GLOD5A6NK44 160 aa16.65■□□□□ 0.26
GCDH-201ENST00000222214 EMC8O43402 210 aa16.65■□□□□ 0.26
GCDH-201ENST00000222214 SLC28A2O43868 658 aa16.65■□□□□ 0.26
GCDH-201ENST00000222214 CD247P20963 164 aa16.65■□□□□ 0.26
GCDH-201ENST00000222214 TLX1P31314 330 aaPredicted RBP16.65■□□□□ 0.26
GCDH-201ENST00000222214 POLR2IP36954 125 aaKnown RBP16.65■□□□□ 0.26
GCDH-201ENST00000222214 YAP1P46937 504 aaKnown RBP16.65■□□□□ 0.26
GCDH-201ENST00000222214 PXNP49023 591 aaPredicted RBP16.65■□□□□ 0.26
GCDH-201ENST00000222214 CRISP3P54108 245 aa16.65■□□□□ 0.26
GCDH-201ENST00000222214 CDH12P55289 794 aa16.65■□□□□ 0.26
GCDH-201ENST00000222214 NUP107P57740 925 aa16.65■□□□□ 0.26
GCDH-201ENST00000222214 TNFRSF17Q02223 184 aa16.65■□□□□ 0.26
GCDH-201ENST00000222214 CDK5R2Q13319 367 aa16.65■□□□□ 0.26
GCDH-201ENST00000222214 SZRD1Q7Z422 152 aa16.65■□□□□ 0.26
GCDH-201ENST00000222214 TRIM73Q86UV7 250 aa16.65■□□□□ 0.26
GCDH-201ENST00000222214 BBS10Q8TAM1 723 aa16.65■□□□□ 0.26
GCDH-201ENST00000222214 ZNF420Q8TAQ5 688 aaPredicted RBP16.65■□□□□ 0.26
GCDH-201ENST00000222214 BAHD1Q8TBE0 780 aaPredicted RBP16.65■□□□□ 0.26
GCDH-201ENST00000222214 SLC37A2Q8TED4 501 aa16.65■□□□□ 0.26
GCDH-201ENST00000222214 RAB8BQ92930 207 aa16.65■□□□□ 0.26
GCDH-201ENST00000222214 TMIGD2Q96BF3 282 aa16.65■□□□□ 0.26
GCDH-201ENST00000222214 MAPKAP1Q9BPZ7 522 aa16.65■□□□□ 0.26
GCDH-201ENST00000222214 PCED1AQ9H1Q7 454 aa16.65■□□□□ 0.26
GCDH-201ENST00000222214 POLR1BQ9H9Y6 1135 aa16.65■□□□□ 0.26
GCDH-201ENST00000222214 BCL2L10Q9HD36 194 aa16.65■□□□□ 0.26
GCDH-201ENST00000222214 ARHGEF17Q96PE2 2063 aaPredicted RBP16.65■□□□□ 0.26
GCDH-201ENST00000222214 E9PQ18 207 aa16.64■□□□□ 0.25
GCDH-201ENST00000222214 SLC1A7O00341 560 aa16.64■□□□□ 0.25
GCDH-201ENST00000222214 B3GALT2O43825 422 aa16.64■□□□□ 0.25
GCDH-201ENST00000222214 CTSVO60911 334 aa16.64■□□□□ 0.25
GCDH-201ENST00000222214 PRKRAO75569 313 aaKnown RBP16.64■□□□□ 0.25
GCDH-201ENST00000222214 OR12D1P0DN82 309 aa16.64■□□□□ 0.25
GCDH-201ENST00000222214 NR2F1P10589 423 aa16.64■□□□□ 0.25
GCDH-201ENST00000222214 IL7RP16871 459 aa16.64■□□□□ 0.25
GCDH-201ENST00000222214 TNFRSF1BP20333 461 aa16.64■□□□□ 0.25
GCDH-201ENST00000222214 CLK3P49761 638 aaKnown RBP16.64■□□□□ 0.25
GCDH-201ENST00000222214 SIM2Q14190 667 aaPredicted RBP16.64■□□□□ 0.25
GCDH-201ENST00000222214 DUSP7Q16829 419 aa16.64■□□□□ 0.25
GCDH-201ENST00000222214 CTU2Q2VPK5 515 aaKnown RBP16.64■□□□□ 0.25
GCDH-201ENST00000222214 OOSP2Q86WS3 158 aa16.64■□□□□ 0.25
GCDH-201ENST00000222214 SLC44A2Q8IWA5 706 aaPredicted RBP16.64■□□□□ 0.25
GCDH-201ENST00000222214 CCDC116Q8IYX3 515 aa16.64■□□□□ 0.25
GCDH-201ENST00000222214 APOBEC4Q8WW27 367 aaKnown RBP16.64■□□□□ 0.25
GCDH-201ENST00000222214 ZNF354BQ96LW1 612 aa16.64■□□□□ 0.25
GCDH-201ENST00000222214 ZNF681Q96N22 645 aa16.64■□□□□ 0.25
GCDH-201ENST00000222214 TREX2Q9BQ50 279 aaPredicted RBP16.64■□□□□ 0.25
GCDH-201ENST00000222214 BTBD2Q9BX70 525 aa16.64■□□□□ 0.25
GCDH-201ENST00000222214 CHRDQ9H2X0 955 aa16.64■□□□□ 0.25
GCDH-201ENST00000222214 TCEAL2Q9H3H9 227 aaPredicted RBP16.64■□□□□ 0.25
GCDH-201ENST00000222214 SERHL2Q9H4I8 314 aa16.64■□□□□ 0.25
GCDH-201ENST00000222214 ZNF556Q9HAH1 456 aa16.64■□□□□ 0.25
GCDH-201ENST00000222214 HRASLS2Q9NWW9 162 aa16.64■□□□□ 0.25
GCDH-201ENST00000222214 TRPC4Q9UBN4 977 aa16.64■□□□□ 0.25
GCDH-201ENST00000222214 SEC14L3Q9UDX4 400 aa16.64■□□□□ 0.25
GCDH-201ENST00000222214 KCND3Q9UK17 655 aa16.64■□□□□ 0.25
GCDH-201ENST00000222214 IGHV1OR15-9A0A0B4J2B8 117 aa16.64■□□□□ 0.25
GCDH-201ENST00000222214 A0A0J9YVX5 310 aa16.64■□□□□ 0.25
GCDH-201ENST00000222214 PRAMEF25A6NGN4 478 aa16.64■□□□□ 0.25
GCDH-201ENST00000222214 ASNA1O43681 348 aa16.64■□□□□ 0.25
GCDH-201ENST00000222214 GADD45GO95257 159 aa16.64■□□□□ 0.25
GCDH-201ENST00000222214 ETS2P15036 469 aa16.64■□□□□ 0.25
GCDH-201ENST00000222214 LIMS1P48059 325 aa16.64■□□□□ 0.25
GCDH-201ENST00000222214 KCNJ5P48544 419 aa16.64■□□□□ 0.25
GCDH-201ENST00000222214 LSAMPQ13449 338 aa16.64■□□□□ 0.25
GCDH-201ENST00000222214 TUBA3CQ13748 450 aa16.64■□□□□ 0.25
GCDH-201ENST00000222214 RNF44Q7L0R7 432 aa16.64■□□□□ 0.25
GCDH-201ENST00000222214 LGI4Q8N135 537 aa16.64■□□□□ 0.25
GCDH-201ENST00000222214 PHF10Q8WUB8 498 aaKnown RBP16.64■□□□□ 0.25
GCDH-201ENST00000222214 XAGE5Q8WWM1 108 aa16.64■□□□□ 0.25
GCDH-201ENST00000222214 HRASLS5Q96KN8 279 aa16.64■□□□□ 0.25
GCDH-201ENST00000222214 FCRL4Q96PJ5 515 aa16.64■□□□□ 0.25
GCDH-201ENST00000222214 FEVQ99581 238 aa16.64■□□□□ 0.25
GCDH-201ENST00000222214 LTB4R2Q9NPC1 389 aa16.64■□□□□ 0.25
GCDH-201ENST00000222214 TPRKBQ9Y3C4 175 aa16.64■□□□□ 0.25
GCDH-201ENST00000222214 GPC6Q9Y625 555 aaPredicted RBP16.64■□□□□ 0.25
GCDH-201ENST00000222214 A0A1W2PPC1 479 aa16.63■□□□□ 0.25
GCDH-201ENST00000222214 AXIN1O15169 862 aa16.63■□□□□ 0.25
GCDH-201ENST00000222214 MRPS14O60783 128 aaKnown RBP16.63■□□□□ 0.25
GCDH-201ENST00000222214 ANGPTL1O95841 491 aa16.63■□□□□ 0.25
GCDH-201ENST00000222214 CPN2P22792 545 aa16.63■□□□□ 0.25
GCDH-201ENST00000222214 CSNK2BP67870 215 aa16.63■□□□□ 0.25
GCDH-201ENST00000222214 ROR2Q01974 943 aaKnown RBP16.63■□□□□ 0.25
GCDH-201ENST00000222214 HHEXQ03014 270 aa16.63■□□□□ 0.25
GCDH-201ENST00000222214 MAPK11Q15759 364 aa16.63■□□□□ 0.25
GCDH-201ENST00000222214 RPS26P11Q5JNZ5 115 aaPredicted RBP16.63■□□□□ 0.25
GCDH-201ENST00000222214 COLEC12Q5KU26 742 aa16.63■□□□□ 0.25
GCDH-201ENST00000222214 PATE1Q8WXA2 126 aa16.63■□□□□ 0.25
GCDH-201ENST00000222214 ORAI3Q9BRQ5 295 aa16.63■□□□□ 0.25
GCDH-201ENST00000222214 LYRM4Q9HD34 91 aa16.63■□□□□ 0.25
GCDH-201ENST00000222214 ACER3Q9NUN7 267 aa16.63■□□□□ 0.25
GCDH-201ENST00000222214 SCN3BQ9NY72 215 aa16.63■□□□□ 0.25
GCDH-201ENST00000222214 HCN4Q9Y3Q4 1203 aa16.63■□□□□ 0.25
GCDH-201ENST00000222214 SNX5Q9Y5X3 404 aa16.63■□□□□ 0.25
GCDH-201ENST00000222214 SPACA6W5XKT8 324 aa16.63■□□□□ 0.25
GCDH-201ENST00000222214 HMGN2P05204 90 aaKnown RBP16.62■□□□□ 0.25
GCDH-201ENST00000222214 JUNDP17535 347 aa16.62■□□□□ 0.25
GCDH-201ENST00000222214 FEN1P39748 380 aaKnown RBP16.62■□□□□ 0.25
GCDH-201ENST00000222214 SMIM11AP58511 58 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms