RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 SERPINI2O75830 405 aa14.31□□□□□ -0.12
EFNB1-201ENST00000204961 ARHGEF15O94989 841 aa14.31□□□□□ -0.12
EFNB1-201ENST00000204961 SLC15A1P46059 708 aa14.31□□□□□ -0.12
EFNB1-201ENST00000204961 UGT2B15P54855 530 aa14.31□□□□□ -0.12
EFNB1-201ENST00000204961 SEC13P55735 322 aa14.31□□□□□ -0.12
EFNB1-201ENST00000204961 RUNX1T1Q06455 604 aa14.31□□□□□ -0.12
EFNB1-201ENST00000204961 GGTA1PQ4G0N0 100 aa14.31□□□□□ -0.12
EFNB1-201ENST00000204961 CRTC2Q53ET0 693 aaPredicted RBP14.31□□□□□ -0.12
EFNB1-201ENST00000204961 PYDC2Q56P42 97 aa14.31□□□□□ -0.12
EFNB1-201ENST00000204961 CRB2Q5IJ48 1285 aa14.31□□□□□ -0.12
EFNB1-201ENST00000204961 MTFR2Q6P444 385 aa14.31□□□□□ -0.12
EFNB1-201ENST00000204961 SLC39A5Q6ZMH5 540 aa14.31□□□□□ -0.12
EFNB1-201ENST00000204961 TRAM1L1Q8N609 369 aa14.31□□□□□ -0.12
EFNB1-201ENST00000204961 TMEM145Q8NBT3 493 aa14.31□□□□□ -0.12
EFNB1-201ENST00000204961 KBTBD8Q8NFY9 601 aa14.31□□□□□ -0.12
EFNB1-201ENST00000204961 GEMIN6Q8WXD5 167 aaKnown RBP14.31□□□□□ -0.12
EFNB1-201ENST00000204961 CLIP3Q96DZ5 547 aa14.31□□□□□ -0.12
EFNB1-201ENST00000204961 FNDC11Q9BVV2 318 aa14.31□□□□□ -0.12
EFNB1-201ENST00000204961 AP3M1Q9Y2T2 418 aa14.31□□□□□ -0.12
EFNB1-201ENST00000204961 NAALAD2Q9Y3Q0 740 aa14.31□□□□□ -0.12
EFNB1-201ENST00000204961 ENPP4Q9Y6X5 453 aa14.31□□□□□ -0.12
EFNB1-201ENST00000204961 IGLV3-16A0A075B6K0 115 aa14.31□□□□□ -0.12
EFNB1-201ENST00000204961 ZC3H12DA2A288 527 aaKnown RBP14.31□□□□□ -0.12
EFNB1-201ENST00000204961 ANKRD34BA5PLL1 514 aa14.31□□□□□ -0.12
EFNB1-201ENST00000204961 PRKYO43930 277 aa14.31□□□□□ -0.12
EFNB1-201ENST00000204961 CYP17A1P05093 508 aa14.31□□□□□ -0.12
EFNB1-201ENST00000204961 SOX18P35713 384 aa14.31□□□□□ -0.12
EFNB1-201ENST00000204961 BMPR1AP36894 532 aa14.31□□□□□ -0.12
EFNB1-201ENST00000204961 DHCR24Q15392 516 aa14.31□□□□□ -0.12
EFNB1-201ENST00000204961 REEP3Q6NUK4 255 aa14.31□□□□□ -0.12
EFNB1-201ENST00000204961 ACSM5Q6NUN0 579 aa14.31□□□□□ -0.12
EFNB1-201ENST00000204961 ANKRD53Q8N9V6 530 aa14.31□□□□□ -0.12
EFNB1-201ENST00000204961 GPR32P1Q8NGA4 272 aa14.31□□□□□ -0.12
EFNB1-201ENST00000204961 VMP1Q96GC9 406 aa14.31□□□□□ -0.12
EFNB1-201ENST00000204961 EPYCQ99645 322 aa14.31□□□□□ -0.12
EFNB1-201ENST00000204961 BTNL2Q9UIR0 455 aa14.31□□□□□ -0.12
EFNB1-201ENST00000204961 SMLR1H3BR10 107 aa14.31□□□□□ -0.12
EFNB1-201ENST00000204961 DVL2O14641 736 aa14.31□□□□□ -0.12
EFNB1-201ENST00000204961 B4GALT2O60909 372 aa14.31□□□□□ -0.12
EFNB1-201ENST00000204961 CD72P21854 359 aa14.31□□□□□ -0.12
EFNB1-201ENST00000204961 NCBP2P52298 156 aaKnown RBP eCLIP14.31□□□□□ -0.12
EFNB1-201ENST00000204961 WDR5P61964 334 aaKnown RBP14.31□□□□□ -0.12
EFNB1-201ENST00000204961 FRMD1Q8N878 549 aa14.31□□□□□ -0.12
EFNB1-201ENST00000204961 DACT3Q96B18 629 aaPredicted RBP14.31□□□□□ -0.12
EFNB1-201ENST00000204961 MMP27Q9H306 513 aa14.31□□□□□ -0.12
EFNB1-201ENST00000204961 TMEM245Q9H330 911 aa14.31□□□□□ -0.12
EFNB1-201ENST00000204961 OR51I1Q9H343 314 aa14.31□□□□□ -0.12
EFNB1-201ENST00000204961 IGFLR1Q9H665 355 aa14.31□□□□□ -0.12
EFNB1-201ENST00000204961 PGRMC2O15173 223 aa14.3□□□□□ -0.12
EFNB1-201ENST00000204961 TSPAN19P0C672 248 aa14.3□□□□□ -0.12
EFNB1-201ENST00000204961 GSTM5P46439 218 aa14.3□□□□□ -0.12
EFNB1-201ENST00000204961 OLR1P78380 273 aa14.3□□□□□ -0.12
EFNB1-201ENST00000204961 SPHARQ15513 63 aa14.3□□□□□ -0.12
EFNB1-201ENST00000204961 TCTN3Q6NUS6 607 aa14.3□□□□□ -0.12
EFNB1-201ENST00000204961 SLC30A6Q6NXT4 461 aa14.3□□□□□ -0.12
EFNB1-201ENST00000204961 TMEM107Q6UX40 140 aa14.3□□□□□ -0.12
EFNB1-201ENST00000204961 DEPDC4Q8N2C3 294 aa14.3□□□□□ -0.12
EFNB1-201ENST00000204961 LYSMD1Q96S90 227 aa14.3□□□□□ -0.12
EFNB1-201ENST00000204961 GPA33Q99795 319 aa14.3□□□□□ -0.12
EFNB1-201ENST00000204961 UCK2Q9BZX2 261 aa14.3□□□□□ -0.12
EFNB1-201ENST00000204961 NUFIP1Q9UHK0 495 aaKnown RBP14.3□□□□□ -0.12
EFNB1-201ENST00000204961 CABIN1Q9Y6J0 2220 aa14.3□□□□□ -0.12
EFNB1-201ENST00000204961 NPIPA5A0A0B4J1W7 369 aa14.3□□□□□ -0.12
EFNB1-201ENST00000204961 NPIPA7E9PJI5 369 aa14.3□□□□□ -0.12
EFNB1-201ENST00000204961 CCRL2O00421 344 aa14.3□□□□□ -0.12
EFNB1-201ENST00000204961 PDPK1O15530 556 aa14.3□□□□□ -0.12
EFNB1-201ENST00000204961 HRO43593 1189 aa14.3□□□□□ -0.12
EFNB1-201ENST00000204961 UGT2B17O75795 530 aa14.3□□□□□ -0.12
EFNB1-201ENST00000204961 NPIPA8P0DM63 369 aa14.3□□□□□ -0.12
EFNB1-201ENST00000204961 CCL5P13501 91 aa14.3□□□□□ -0.12
EFNB1-201ENST00000204961 SNRPD2P62316 118 aaKnown RBP14.3□□□□□ -0.12
EFNB1-201ENST00000204961 SLC7A9P82251 487 aa14.3□□□□□ -0.12
EFNB1-201ENST00000204961 ZNF791Q3KP31 576 aaPredicted RBP14.3□□□□□ -0.12
EFNB1-201ENST00000204961 C9orf64Q5T6V5 341 aa14.3□□□□□ -0.12
EFNB1-201ENST00000204961 NLRP8Q86W28 1048 aa14.3□□□□□ -0.12
EFNB1-201ENST00000204961 SLC30A8Q8IWU4 369 aa14.3□□□□□ -0.12
EFNB1-201ENST00000204961 POF1BQ8WVV4 589 aa14.3□□□□□ -0.12
EFNB1-201ENST00000204961 COQ8BQ96D53 544 aa14.3□□□□□ -0.12
EFNB1-201ENST00000204961 C12orf66Q96MD2 445 aa14.3□□□□□ -0.12
EFNB1-201ENST00000204961 FYTTD1Q96QD9 318 aaKnown RBP14.3□□□□□ -0.12
EFNB1-201ENST00000204961 MKLN1Q9UL63 735 aa14.3□□□□□ -0.12
EFNB1-201ENST00000204961 CA5BQ9Y2D0 317 aa14.3□□□□□ -0.12
EFNB1-201ENST00000204961 NOTOA8MTQ0 251 aa14.3□□□□□ -0.12
EFNB1-201ENST00000204961 SLC31A1O15431 190 aa14.3□□□□□ -0.12
EFNB1-201ENST00000204961 EIF2S1P05198 315 aaKnown RBP14.3□□□□□ -0.12
EFNB1-201ENST00000204961 H1F0P07305 194 aaKnown RBP14.3□□□□□ -0.12
EFNB1-201ENST00000204961 SDC2P34741 201 aa14.3□□□□□ -0.12
EFNB1-201ENST00000204961 GPR4P46093 362 aa14.3□□□□□ -0.12
EFNB1-201ENST00000204961 SLAMF1Q13291 335 aa14.3□□□□□ -0.12
EFNB1-201ENST00000204961 LRRC26Q2I0M4 334 aa14.3□□□□□ -0.12
EFNB1-201ENST00000204961 TMPRSS11AQ6ZMR5 421 aa14.3□□□□□ -0.12
EFNB1-201ENST00000204961 OR56A3Q8NH54 315 aa14.3□□□□□ -0.12
EFNB1-201ENST00000204961 ZCCHC10Q8TBK6 192 aa14.3□□□□□ -0.12
EFNB1-201ENST00000204961 PSD2Q9BQI7 771 aa14.3□□□□□ -0.12
EFNB1-201ENST00000204961 BARHL1Q9BZE3 327 aa14.3□□□□□ -0.12
EFNB1-201ENST00000204961 HOXD1Q9GZZ0 328 aa14.3□□□□□ -0.12
EFNB1-201ENST00000204961 C6orf106Q9H6K1 298 aaPredicted RBP14.3□□□□□ -0.12
EFNB1-201ENST00000204961 RNASET2O00584 256 aaKnown RBP14.29□□□□□ -0.12
EFNB1-201ENST00000204961 ERI3O43414 337 aaKnown RBP14.29□□□□□ -0.12
EFNB1-201ENST00000204961 CSO75390 466 aaKnown RBP14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms