RNA–Protein interactions for RNA: ENST00000064724.7

CLDN11-201, Transcript of claudin 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN11, Length 2,169 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-201ENST00000064724 MLF2Q15773 248 aaPredicted RBP16.4■□□□□ 0.22
CLDN11-201ENST00000064724 SLC22A16Q86VW1 577 aa16.4■□□□□ 0.22
CLDN11-201ENST00000064724 RAB42Q8N4Z0 105 aa16.4■□□□□ 0.22
CLDN11-201ENST00000064724 TP53I13Q8NBR0 393 aaPredicted RBP16.4■□□□□ 0.22
CLDN11-201ENST00000064724 TTLQ8NG68 377 aa16.4■□□□□ 0.22
CLDN11-201ENST00000064724 OR2A1Q8NGT9 310 aa16.4■□□□□ 0.22
CLDN11-201ENST00000064724 FGF13Q92913 245 aa16.4■□□□□ 0.22
CLDN11-201ENST00000064724 ERLEC1Q96DZ1 483 aa16.4■□□□□ 0.22
CLDN11-201ENST00000064724 INSM2Q96T92 566 aaPredicted RBP16.4■□□□□ 0.22
CLDN11-201ENST00000064724 DPH7Q9BTV6 452 aa16.4■□□□□ 0.22
CLDN11-201ENST00000064724 AICDAQ9GZX7 198 aa16.4■□□□□ 0.22
CLDN11-201ENST00000064724 GLIPR2Q9H4G4 154 aa16.4■□□□□ 0.22
CLDN11-201ENST00000064724 ZDHHC4Q9NPG8 344 aa16.4■□□□□ 0.22
CLDN11-201ENST00000064724 MBNL1Q9NR56 388 aaKnown RBP16.4■□□□□ 0.22
CLDN11-201ENST00000064724 OBP2AQ9NY56 170 aa16.4■□□□□ 0.22
CLDN11-201ENST00000064724 SCHIP1Q9P0W5 487 aaPredicted RBP16.4■□□□□ 0.22
CLDN11-201ENST00000064724 A4GNTQ9UNA3 340 aa16.4■□□□□ 0.22
CLDN11-201ENST00000064724 CHD7Q9P2D1 2997 aa16.4■□□□□ 0.22
CLDN11-201ENST00000064724 A0A1W2PRQ8 180 aa16.39■□□□□ 0.21
CLDN11-201ENST00000064724 ARHGAP33O14559 1287 aa16.39■□□□□ 0.21
CLDN11-201ENST00000064724 OR12D1P0DN82 309 aa16.39■□□□□ 0.21
CLDN11-201ENST00000064724 RHAGQ02094 409 aa16.39■□□□□ 0.21
CLDN11-201ENST00000064724 NCF4Q15080 339 aa16.39■□□□□ 0.21
CLDN11-201ENST00000064724 MED22Q15528 200 aa16.39■□□□□ 0.21
CLDN11-201ENST00000064724 SYPL1Q16563 259 aa16.39■□□□□ 0.21
CLDN11-201ENST00000064724 TMEM35AQ53FP2 167 aa16.39■□□□□ 0.21
CLDN11-201ENST00000064724 NDUFAF5Q5TEU4 345 aa16.39■□□□□ 0.21
CLDN11-201ENST00000064724 CD300LDQ6UXZ3 194 aa16.39■□□□□ 0.21
CLDN11-201ENST00000064724 DEF8Q6ZN54 512 aa16.39■□□□□ 0.21
CLDN11-201ENST00000064724 IL17RCQ8NAC3 791 aa16.39■□□□□ 0.21
CLDN11-201ENST00000064724 SLC7A13Q8TCU3 470 aa16.39■□□□□ 0.21
CLDN11-201ENST00000064724 HERVK_113Q902F9 699 aa16.39■□□□□ 0.21
CLDN11-201ENST00000064724 FERD3LQ96RJ6 166 aa16.39■□□□□ 0.21
CLDN11-201ENST00000064724 IL4I1Q96RQ9 567 aa16.39■□□□□ 0.21
CLDN11-201ENST00000064724 POLR2J3Q9H1A7 115 aaKnown RBP16.39■□□□□ 0.21
CLDN11-201ENST00000064724 OR51I1Q9H343 314 aa16.39■□□□□ 0.21
CLDN11-201ENST00000064724 BCL2L10Q9HD36 194 aa16.39■□□□□ 0.21
CLDN11-201ENST00000064724 C11orf16Q9NQ32 467 aa16.39■□□□□ 0.21
CLDN11-201ENST00000064724 SLC35C2Q9NQQ7 365 aa16.39■□□□□ 0.21
CLDN11-201ENST00000064724 SEMA3GQ9NS98 782 aa16.39■□□□□ 0.21
CLDN11-201ENST00000064724 MKLN1Q9UL63 735 aa16.39■□□□□ 0.21
CLDN11-201ENST00000064724 CD72P21854 359 aa16.38■□□□□ 0.21
CLDN11-201ENST00000064724 RAB28P51157 221 aa16.38■□□□□ 0.21
CLDN11-201ENST00000064724 XKP51811 444 aa16.38■□□□□ 0.21
CLDN11-201ENST00000064724 ALDH6A1Q02252 535 aaKnown RBP16.38■□□□□ 0.21
CLDN11-201ENST00000064724 DOC2BQ14184 412 aa16.38■□□□□ 0.21
CLDN11-201ENST00000064724 ZIC1Q15915 447 aa16.38■□□□□ 0.21
CLDN11-201ENST00000064724 SSX1Q16384 188 aa16.38■□□□□ 0.21
CLDN11-201ENST00000064724 TSTQ16762 297 aaKnown RBP16.38■□□□□ 0.21
CLDN11-201ENST00000064724 RNLSQ5VYX0 342 aa16.38■□□□□ 0.21
CLDN11-201ENST00000064724 CYP4Z2PQ8N1L4 340 aa16.38■□□□□ 0.21
CLDN11-201ENST00000064724 OR8J1Q8NGP2 316 aa16.38■□□□□ 0.21
CLDN11-201ENST00000064724 WDR36Q8NI36 951 aaKnown RBP16.38■□□□□ 0.21
CLDN11-201ENST00000064724 VANGL1Q8TAA9 524 aaPredicted RBP16.38■□□□□ 0.21
CLDN11-201ENST00000064724 ITFG2Q969R8 447 aa16.38■□□□□ 0.21
CLDN11-201ENST00000064724 ARMC5Q96C12 935 aa16.38■□□□□ 0.21
CLDN11-201ENST00000064724 WDR26Q9H7D7 661 aa16.38■□□□□ 0.21
CLDN11-201ENST00000064724 TRPV4Q9HBA0 871 aa16.38■□□□□ 0.21
CLDN11-201ENST00000064724 CPNE5Q9HCH3 593 aa16.38■□□□□ 0.21
CLDN11-201ENST00000064724 LSM2Q9Y333 95 aaKnown RBP16.38■□□□□ 0.21
CLDN11-201ENST00000064724 OR1A2Q9Y585 309 aa16.38■□□□□ 0.21
CLDN11-201ENST00000064724 PEX16Q9Y5Y5 336 aa16.38■□□□□ 0.21
CLDN11-201ENST00000064724 COL4A3Q01955 1670 aa16.38■□□□□ 0.21
CLDN11-201ENST00000064724 PPM1DO15297 605 aa16.38■□□□□ 0.21
CLDN11-201ENST00000064724 MID1O15344 667 aa16.38■□□□□ 0.21
CLDN11-201ENST00000064724 PCDH8O95206 1070 aa16.38■□□□□ 0.21
CLDN11-201ENST00000064724 TP53P04637 393 aaPredicted RBP16.38■□□□□ 0.21
CLDN11-201ENST00000064724 SCG5P05408 212 aa16.38■□□□□ 0.21
CLDN11-201ENST00000064724 CSTF2P33240 577 aaKnown RBP eCLIP16.38■□□□□ 0.21
CLDN11-201ENST00000064724 S100A5P33763 92 aa16.38■□□□□ 0.21
CLDN11-201ENST00000064724 ETV6P41212 452 aa16.38■□□□□ 0.21
CLDN11-201ENST00000064724 DGKEP52429 567 aa16.38■□□□□ 0.21
CLDN11-201ENST00000064724 SFSWAPQ12872 951 aaKnown RBP16.38■□□□□ 0.21
CLDN11-201ENST00000064724 PSRC1Q6PGN9 363 aaPredicted RBP16.38■□□□□ 0.21
CLDN11-201ENST00000064724 ZNF793Q6ZN11 406 aa16.38■□□□□ 0.21
CLDN11-201ENST00000064724 ADGRD2Q7Z7M1 963 aa16.38■□□□□ 0.21
CLDN11-201ENST00000064724 COMTD1Q86VU5 262 aa16.38■□□□□ 0.21
CLDN11-201ENST00000064724 KRT73Q86Y46 540 aa16.38■□□□□ 0.21
CLDN11-201ENST00000064724 XAGE5Q8WWM1 108 aa16.38■□□□□ 0.21
CLDN11-201ENST00000064724 KLHL6Q8WZ60 621 aa16.38■□□□□ 0.21
CLDN11-201ENST00000064724 SLC35G5Q96KT7 338 aa16.38■□□□□ 0.21
CLDN11-201ENST00000064724 C12orf66Q96MD2 445 aa16.38■□□□□ 0.21
CLDN11-201ENST00000064724 CAMK1GQ96NX5 476 aa16.38■□□□□ 0.21
CLDN11-201ENST00000064724 C17orf62Q9BQA9 187 aa16.38■□□□□ 0.21
CLDN11-201ENST00000064724 FAIM2Q9BWQ8 316 aa16.38■□□□□ 0.21
CLDN11-201ENST00000064724 RACGAP1Q9H0H5 632 aa16.38■□□□□ 0.21
CLDN11-201ENST00000064724 CFL2Q9Y281 166 aa16.38■□□□□ 0.21
CLDN11-201ENST00000064724 PLXND1Q9Y4D7 1925 aa16.38■□□□□ 0.21
CLDN11-201ENST00000064724 MAN2B1O00754 1011 aa16.37■□□□□ 0.21
CLDN11-201ENST00000064724 KIAA0513O60268 411 aa16.37■□□□□ 0.21
CLDN11-201ENST00000064724 SOX14O95416 240 aa16.37■□□□□ 0.21
CLDN11-201ENST00000064724 IGFBP1P08833 259 aaPredicted RBP16.37■□□□□ 0.21
CLDN11-201ENST00000064724 NR2F1P10589 423 aa16.37■□□□□ 0.21
CLDN11-201ENST00000064724 ENDOUP21128 410 aaKnown RBP16.37■□□□□ 0.21
CLDN11-201ENST00000064724 PPP2R1BP30154 601 aa16.37■□□□□ 0.21
CLDN11-201ENST00000064724 FEN1P39748 380 aaKnown RBP16.37■□□□□ 0.21
CLDN11-201ENST00000064724 SSR2P43308 183 aa16.37■□□□□ 0.21
CLDN11-201ENST00000064724 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.37■□□□□ 0.21
CLDN11-201ENST00000064724 COX10Q12887 443 aa16.37■□□□□ 0.21
CLDN11-201ENST00000064724 OCLNQ16625 522 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms