RNA–Protein interactions for RNA: ENSMUST00000092215.5

Ccdc38-201, Transcript of Coiled-coil domain-containing protein 38, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc38, Length 3,656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38-201ENSMUST00000092215 Usp22Q5DU02 525 aa9.38□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Mrps35Q8BJZ4 320 aaKnown RBP9.38□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 BlmhQ8R016 455 aa9.38□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Olfr986Q8VFN6 312 aa9.38□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Olfr799Q8VGI7 311 aa9.38□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Pink1Q99MQ3 580 aa9.38□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Lypd6bQ9D7F2 191 aa9.38□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Mfsd2aQ9DA75 534 aa9.38□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 PaplnQ9EPX2 1280 aa9.38□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Kif28pD3YXS5 1028 aa9.38□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Vmn1r238E9Q373 306 aa9.38□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 LatO54957 242 aa9.38□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Cd93O89103 644 aa9.38□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Gabrg3P27681 467 aa9.38□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Ido1P28776 407 aaKnown RBP9.38□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Csrp2P97314 193 aaKnown RBP9.38□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 HexdcQ3U4H6 486 aa9.38□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 4930512M02RikQ5SQK8 218 aa9.38□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Hspa1aQ61696 641 aa9.38□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 A4galtQ67BJ4 359 aa9.38□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Klhl14Q69ZK5 630 aa9.38□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Zfp933Q6PEE4 468 aa9.38□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Slco4c1Q8BGD4 722 aa9.38□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Serinc5Q8BHJ6 461 aa9.38□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Kyat1Q8BTY1 424 aa9.38□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 IlvblQ8BU33 632 aa9.38□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Sec22cQ8BXT9 303 aa9.38□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Tmem45bQ8VCZ2 278 aa9.38□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Olfr183Q8VFB9 309 aa9.38□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 SelenosQ9BCZ4 190 aa9.38□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Echdc3Q9D7J9 300 aa9.38□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Dapp1Q9QXT1 280 aa9.38□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Nupr1Q9WTK0 80 aa9.38□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Itgb6Q9Z0T9 787 aa9.38□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Fkbp9Q9Z247 570 aa9.38□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Pramef20B1ARV6 477 aa9.37□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Zfp282E9PVC2 666 aa9.37□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Angpt2O35608 496 aa9.37□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Galr3O88853 370 aa9.37□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Ptchd3Q0EEE2 906 aa9.37□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Acss3Q14DH7 682 aa9.37□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Smu1Q3UKJ7 513 aaKnown RBP9.37□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Q3UST5 385 aa9.37□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Nr1h2Q60644 446 aa9.37□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Lrit2Q6PFC5 549 aa9.37□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Olfr1065Q7TR70 313 aa9.37□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Fam83eQ80XS7 481 aa9.37□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Akr7a2Q8CG76 367 aa9.37□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Agpat4Q8K4X7 378 aa9.37□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Vmn1r234Q8R298 329 aa9.37□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Neto1Q8R4I7 533 aa9.37□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Olfr582Q8VGV9 319 aa9.37□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Slc35b2Q91ZN5 431 aa9.37□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Skp1Q9WTX5 163 aa9.37□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 HnrnpfQ9Z2X1 415 aaKnown RBP9.37□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Scgb2b17S4R2V3 82 aa9.37□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Gm8159E9Q0R1 267 aa9.37□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Arhgap40E9Q6X9 672 aa9.37□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Gm5152L7N200 190 aa9.37□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Pde9aO70628 534 aa9.37□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Il2raP01590 268 aa9.37□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 HbaP01942 142 aa9.37□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 HexaP29416 528 aa9.37□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Tas2r7P59530 312 aa9.37□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Larp7Q05CL8 570 aaKnown RBP9.37□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Mtf1Q07243 675 aa9.37□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 MocosQ14CH1 862 aa9.37□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Wdr36Q3TAQ9 899 aaKnown RBP9.37□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Itgb2lQ3UV74 738 aa9.37□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Pla2g7Q60963 440 aa9.37□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Ddx42Q810A7 929 aaKnown RBP9.37□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Gm3411Q8C7R2 150 aa9.37□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Dnajc27Q8CFP6 273 aa9.37□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Gpr1Q8K087 353 aa9.37□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Olfr781Q8VFZ8 311 aa9.37□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 DhddsQ99KU1 333 aa9.37□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Atp13a2Q9CTG6 1169 aa9.37□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Fndc8Q9D2H8 321 aa9.37□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Myg1Q9JK81 380 aa9.37□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 HcstQ9QUJ0 79 aa9.37□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 HnrnpdlQ9Z130 301 aaKnown RBP9.37□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 RttnQ8R4Y8 2226 aa9.37□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Gm595A2AF73 655 aa9.37□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 4930451I11RikE9Q9R3 111 aa9.37□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Rnf165E9QAU8 347 aa9.37□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 TesP47226 423 aaKnown RBP9.37□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Kpnb1P70168 876 aaKnown RBP9.37□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Galnt3P70419 633 aa9.37□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Olfr681Q3SXH8 315 aa9.37□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 2410002F23RikQ3TE80 284 aa9.37□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Lrrc28Q3TX51 367 aa9.37□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Glt8d2Q640P4 349 aa9.37□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Hist1h2aaQ8CGP4 129 aa9.37□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Upp2Q8CGR7 320 aa9.37□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Olfr583Q8VG25 319 aa9.37□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Olfr679Q8VGV0 315 aa9.37□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Katnal2Q9D3R6 539 aa9.37□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Hm13Q9D8V0 378 aa9.37□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Gm13420A0A140LJJ2 248 aa9.36□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Olfr671A0A1B0GSN5 317 aa9.36□□□□□ -0.91
Retrieved 100 of 22,080 RNA–protein pairs in 29.2 ms