RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Chpt1Q8C025 398 aa15.48■□□□□ 0.07
Trim28-201ENSMUST00000005705 Vps37aQ8CHS8 397 aa15.48■□□□□ 0.07
Trim28-201ENSMUST00000005705 Ift80Q8K057 777 aa15.48■□□□□ 0.07
Trim28-201ENSMUST00000005705 Olfr1093Q8VF14 322 aa15.48■□□□□ 0.07
Trim28-201ENSMUST00000005705 Olfr541Q8VGM0 312 aa15.48■□□□□ 0.07
Trim28-201ENSMUST00000005705 Satb2Q8VI24 733 aa15.48■□□□□ 0.07
Trim28-201ENSMUST00000005705 Ppil6Q9D6D8 278 aa15.48■□□□□ 0.07
Trim28-201ENSMUST00000005705 ClpxQ9JHS4 634 aaKnown RBP15.48■□□□□ 0.07
Trim28-201ENSMUST00000005705 Orc6Q9WUJ8 262 aa15.48■□□□□ 0.07
Trim28-201ENSMUST00000005705 Pou2f1P25425 770 aa15.47■□□□□ 0.07
Trim28-201ENSMUST00000005705 Csf2rb2P26954 878 aa15.47■□□□□ 0.07
Trim28-201ENSMUST00000005705 ThpoP40226 356 aa15.47■□□□□ 0.07
Trim28-201ENSMUST00000005705 Adamts8P57110 905 aa15.47■□□□□ 0.07
Trim28-201ENSMUST00000005705 VaspP70460 375 aaKnown RBP15.47■□□□□ 0.07
Trim28-201ENSMUST00000005705 Znf800Q0VEE6 662 aa15.47■□□□□ 0.07
Trim28-201ENSMUST00000005705 Spata6Q3U6K5 488 aa15.47■□□□□ 0.07
Trim28-201ENSMUST00000005705 Zp1Q62005 623 aa15.47■□□□□ 0.07
Trim28-201ENSMUST00000005705 Yod1Q8CB27 343 aa15.47■□□□□ 0.07
Trim28-201ENSMUST00000005705 Tab1Q8CF89 502 aa15.47■□□□□ 0.07
Trim28-201ENSMUST00000005705 Gabarapl1Q8R3R8 117 aa15.47■□□□□ 0.07
Trim28-201ENSMUST00000005705 Olfr1346Q8VGH6 313 aa15.47■□□□□ 0.07
Trim28-201ENSMUST00000005705 Olfr666Q8VH00 318 aa15.47■□□□□ 0.07
Trim28-201ENSMUST00000005705 Cox4i2Q91W29 172 aa15.47■□□□□ 0.07
Trim28-201ENSMUST00000005705 Pex16Q91XC9 336 aa15.47■□□□□ 0.07
Trim28-201ENSMUST00000005705 Rprd1bQ9CSU0 326 aaKnown RBP15.47■□□□□ 0.07
Trim28-201ENSMUST00000005705 Osbpl3Q9DBS9 855 aa15.47■□□□□ 0.07
Trim28-201ENSMUST00000005705 Olfr630Q9EQQ7 319 aa15.47■□□□□ 0.07
Trim28-201ENSMUST00000005705 Spin2-ps6A0A140T8V2 174 aa15.47■□□□□ 0.07
Trim28-201ENSMUST00000005705 Gm6710A2ART0 554 aa15.47■□□□□ 0.07
Trim28-201ENSMUST00000005705 Tex264E9Q137 309 aa15.47■□□□□ 0.07
Trim28-201ENSMUST00000005705 Gm597E9Q8J5 896 aa15.47■□□□□ 0.07
Trim28-201ENSMUST00000005705 Tex16F6WNY1 1150 aa15.47■□□□□ 0.07
Trim28-201ENSMUST00000005705 Alg10bQ3UGP8 474 aa15.47■□□□□ 0.07
Trim28-201ENSMUST00000005705 PmlQ60953 885 aa15.47■□□□□ 0.07
Trim28-201ENSMUST00000005705 Lrp10Q7TQH7 713 aa15.47■□□□□ 0.07
Trim28-201ENSMUST00000005705 Vangl1Q80Z96 526 aa15.47■□□□□ 0.07
Trim28-201ENSMUST00000005705 Nup107Q8BH74 926 aa15.47■□□□□ 0.07
Trim28-201ENSMUST00000005705 Gm10330Q8BKS1 112 aa15.47■□□□□ 0.07
Trim28-201ENSMUST00000005705 Q8C4P0 716 aa15.47■□□□□ 0.07
Trim28-201ENSMUST00000005705 Pcyox1lQ8C7K6 495 aa15.47■□□□□ 0.07
Trim28-201ENSMUST00000005705 Slc25a37Q920G8 338 aa15.47■□□□□ 0.07
Trim28-201ENSMUST00000005705 Rwdd2bQ99M03 290 aa15.47■□□□□ 0.07
Trim28-201ENSMUST00000005705 DynapQ9D7M5 161 aa15.47■□□□□ 0.07
Trim28-201ENSMUST00000005705 Natd1Q9DBW3 110 aa15.47■□□□□ 0.07
Trim28-201ENSMUST00000005705 Zfp809G3X9G7 402 aa15.47■□□□□ 0.07
Trim28-201ENSMUST00000005705 Vmn1r16K7N775 303 aa15.47■□□□□ 0.07
Trim28-201ENSMUST00000005705 Gcm2O09102 504 aa15.47■□□□□ 0.07
Trim28-201ENSMUST00000005705 MbP04247 154 aa15.47■□□□□ 0.07
Trim28-201ENSMUST00000005705 C9P06683 548 aa15.47■□□□□ 0.07
Trim28-201ENSMUST00000005705 AcadvlP50544 656 aa15.47■□□□□ 0.07
Trim28-201ENSMUST00000005705 Dppa5bP85965 119 aa15.47■□□□□ 0.07
Trim28-201ENSMUST00000005705 Taar7aQ5QD12 358 aa15.47■□□□□ 0.07
Trim28-201ENSMUST00000005705 Ostm1Q8BGT0 338 aa15.47■□□□□ 0.07
Trim28-201ENSMUST00000005705 Acp6Q8BP40 418 aa15.47■□□□□ 0.07
Trim28-201ENSMUST00000005705 Mblac1Q8BWY4 260 aa15.47■□□□□ 0.07
Trim28-201ENSMUST00000005705 Hcar1Q8C131 343 aa15.47■□□□□ 0.07
Trim28-201ENSMUST00000005705 Il23rQ8K4B4 644 aa15.47■□□□□ 0.07
Trim28-201ENSMUST00000005705 Fam161aQ8QZV6 448 aa15.47■□□□□ 0.07
Trim28-201ENSMUST00000005705 Snx11Q91WL6 271 aa15.47■□□□□ 0.07
Trim28-201ENSMUST00000005705 Tmem150aQ91WN2 271 aa15.47■□□□□ 0.07
Trim28-201ENSMUST00000005705 Asf1aQ9CQE6 204 aa15.47■□□□□ 0.07
Trim28-201ENSMUST00000005705 Stx11Q9D3G5 287 aa15.47■□□□□ 0.07
Trim28-201ENSMUST00000005705 Pop5Q9DB28 169 aa15.47■□□□□ 0.07
Trim28-201ENSMUST00000005705 Adam25Q9R159 760 aa15.47■□□□□ 0.07
Trim28-201ENSMUST00000005705 9930021J03RikH3BKP8 2027 aa15.46■□□□□ 0.07
Trim28-201ENSMUST00000005705 Cldn34b1B1AZQ8 209 aa15.46■□□□□ 0.07
Trim28-201ENSMUST00000005705 Slc9a5B2RXE2 898 aa15.46■□□□□ 0.07
Trim28-201ENSMUST00000005705 Olfr631F8VPJ9 319 aa15.46■□□□□ 0.07
Trim28-201ENSMUST00000005705 Psmc3ipO35047 217 aa15.46■□□□□ 0.07
Trim28-201ENSMUST00000005705 Csf2P01587 141 aa15.46■□□□□ 0.07
Trim28-201ENSMUST00000005705 CryaaP24622 196 aa15.46■□□□□ 0.07
Trim28-201ENSMUST00000005705 Eef1a2P62631 463 aaKnown RBP15.46■□□□□ 0.07
Trim28-201ENSMUST00000005705 Adra1bP97717 514 aa15.46■□□□□ 0.07
Trim28-201ENSMUST00000005705 Zfp41Q02526 198 aa15.46■□□□□ 0.07
Trim28-201ENSMUST00000005705 Malt1Q2TBA3 832 aa15.46■□□□□ 0.07
Trim28-201ENSMUST00000005705 PapolgQ6PCL9 739 aa15.46■□□□□ 0.07
Trim28-201ENSMUST00000005705 Olfr1318Q7TQW6 320 aa15.46■□□□□ 0.07
Trim28-201ENSMUST00000005705 Il17rdQ8JZL1 738 aa15.46■□□□□ 0.07
Trim28-201ENSMUST00000005705 Olfr1317Q8VF84 316 aa15.46■□□□□ 0.07
Trim28-201ENSMUST00000005705 Olfr850Q8VFF2 315 aa15.46■□□□□ 0.07
Trim28-201ENSMUST00000005705 Cldn34b2Q9D9N2 209 aa15.46■□□□□ 0.07
Trim28-201ENSMUST00000005705 Cypt12Q9DAR6 119 aa15.46■□□□□ 0.07
Trim28-201ENSMUST00000005705 Xrn2Q9DBR1 951 aaKnown RBP15.46■□□□□ 0.07
Trim28-201ENSMUST00000005705 Ap3m1Q9JKC8 418 aa15.46■□□□□ 0.07
Trim28-201ENSMUST00000005705 Tcea2Q9QVN7 299 aa15.46■□□□□ 0.07
Trim28-201ENSMUST00000005705 Tcp10cE9Q046 482 aa15.46■□□□□ 0.07
Trim28-201ENSMUST00000005705 Cers1P27545 350 aa15.46■□□□□ 0.07
Trim28-201ENSMUST00000005705 Hoxa10P31310 416 aa15.46■□□□□ 0.07
Trim28-201ENSMUST00000005705 Ccdc106Q3ULM0 279 aa15.46■□□□□ 0.07
Trim28-201ENSMUST00000005705 Itgb2lQ3UV74 738 aa15.46■□□□□ 0.07
Trim28-201ENSMUST00000005705 Nr1h4Q60641 488 aa15.46■□□□□ 0.07
Trim28-201ENSMUST00000005705 Znf503Q7TMA2 652 aa15.46■□□□□ 0.07
Trim28-201ENSMUST00000005705 Ankrd9Q8BH83 326 aa15.46■□□□□ 0.07
Trim28-201ENSMUST00000005705 RhdQ8CF94 418 aa15.46■□□□□ 0.07
Trim28-201ENSMUST00000005705 Sphk1Q8CI15 382 aa15.46■□□□□ 0.07
Trim28-201ENSMUST00000005705 Adap2Q8R2V5 381 aa15.46■□□□□ 0.07
Trim28-201ENSMUST00000005705 Abhd4Q8VD66 342 aa15.46■□□□□ 0.07
Trim28-201ENSMUST00000005705 Hspa14Q99M31 509 aa15.46■□□□□ 0.07
Trim28-201ENSMUST00000005705 Mrpl54Q9CPW3 135 aa15.46■□□□□ 0.07
Trim28-201ENSMUST00000005705 ClpsQ9CQC2 113 aa15.46■□□□□ 0.07
Retrieved 100 of 22,080 RNA–protein pairs in 55.3 ms