RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, human

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-231	ENST00000641939	OR10H2	O60403	315 aa		13.97	□□□□□ -0.17
PHGDH-231	ENST00000641939	ULK1	O75385	1050 aa		13.97	□□□□□ -0.17
PHGDH-231	ENST00000641939	ESRRB	O95718	433 aa		13.97	□□□□□ -0.17
PHGDH-231	ENST00000641939	ENO1	P06733	434 aa	Known RBP	13.97	□□□□□ -0.17
PHGDH-231	ENST00000641939	NME2	P22392	152 aa		13.97	□□□□□ -0.17
PHGDH-231	ENST00000641939	SSR4	P51571	173 aa		13.97	□□□□□ -0.17
PHGDH-231	ENST00000641939	NAA20	P61599	178 aa		13.97	□□□□□ -0.17
PHGDH-231	ENST00000641939	RNF4	P78317	190 aa		13.97	□□□□□ -0.17
PHGDH-231	ENST00000641939	SLC18A2	Q05940	514 aa		13.97	□□□□□ -0.17
PHGDH-231	ENST00000641939	IFFO1	Q0D2I5	559 aa		13.97	□□□□□ -0.17
PHGDH-231	ENST00000641939	GALNT1	Q10472	559 aa	Predicted RBP	13.97	□□□□□ -0.17
PHGDH-231	ENST00000641939	TBL3	Q12788	808 aa	Known RBP	13.97	□□□□□ -0.17
PHGDH-231	ENST00000641939	CSTF3	Q12996	717 aa	Known RBP	13.97	□□□□□ -0.17
PHGDH-231	ENST00000641939	MAPKAPK3	Q16644	382 aa		13.97	□□□□□ -0.17
PHGDH-231	ENST00000641939	TCHHL1	Q5QJ38	904 aa	Predicted RBP	13.97	□□□□□ -0.17
PHGDH-231	ENST00000641939	FAM219B	Q5XKK7	198 aa		13.97	□□□□□ -0.17
PHGDH-231	ENST00000641939	OR52E8	Q6IFG1	317 aa		13.97	□□□□□ -0.17
PHGDH-231	ENST00000641939	GALNTL5	Q7Z4T8	443 aa		13.97	□□□□□ -0.17
PHGDH-231	ENST00000641939	C4orf33	Q8N1A6	199 aa		13.97	□□□□□ -0.17
PHGDH-231	ENST00000641939	FAM98A	Q8NCA5	519 aa	Known RBP	13.97	□□□□□ -0.17
PHGDH-231	ENST00000641939	OR5L2	Q8NGL0	311 aa		13.97	□□□□□ -0.17
PHGDH-231	ENST00000641939	RDH11	Q8TC12	318 aa		13.97	□□□□□ -0.17
PHGDH-231	ENST00000641939	CAVIN3	Q969G5	261 aa		13.97	□□□□□ -0.17
PHGDH-231	ENST00000641939	PPWD1	Q96BP3	646 aa	Known RBP	13.97	□□□□□ -0.17
PHGDH-231	ENST00000641939	ART5	Q96L15	291 aa		13.97	□□□□□ -0.17
PHGDH-231	ENST00000641939	HBEGF	Q99075	208 aa		13.97	□□□□□ -0.17
PHGDH-231	ENST00000641939	LIN28A	Q9H9Z2	209 aa	Known RBP	13.97	□□□□□ -0.17
PHGDH-231	ENST00000641939	TEX10	Q9NXF1	929 aa	Predicted RBP	13.97	□□□□□ -0.17
PHGDH-231	ENST00000641939	VPS29	Q9UBQ0	182 aa		13.97	□□□□□ -0.17
PHGDH-231	ENST00000641939	PCNX1	Q96RV3	2341 aa		13.97	□□□□□ -0.17
PHGDH-231	ENST00000641939	CCDC151	A5D8V7	595 aa		13.96	□□□□□ -0.17
PHGDH-231	ENST00000641939	ASPDH	A6ND91	283 aa		13.96	□□□□□ -0.17
PHGDH-231	ENST00000641939	PGRMC2	O15173	223 aa		13.96	□□□□□ -0.17
PHGDH-231	ENST00000641939	GUCY1B2	O75343	617 aa		13.96	□□□□□ -0.17
PHGDH-231	ENST00000641939	OR2J2	O76002	312 aa		13.96	□□□□□ -0.17
PHGDH-231	ENST00000641939	IGKV3-11	P04433	115 aa		13.96	□□□□□ -0.17
PHGDH-231	ENST00000641939	MST1	P26927	711 aa		13.96	□□□□□ -0.17
PHGDH-231	ENST00000641939	GALNS	P34059	522 aa		13.96	□□□□□ -0.17
PHGDH-231	ENST00000641939	HK2	P52789	917 aa		13.96	□□□□□ -0.17
PHGDH-231	ENST00000641939	MAPK12	P53778	367 aa		13.96	□□□□□ -0.17
PHGDH-231	ENST00000641939	NAGLU	P54802	743 aa		13.96	□□□□□ -0.17
PHGDH-231	ENST00000641939	DNAJB13	P59910	316 aa		13.96	□□□□□ -0.17
PHGDH-231	ENST00000641939	NDUFAF5	Q5TEU4	345 aa		13.96	□□□□□ -0.17
PHGDH-231	ENST00000641939	C16orf47	Q6ZP98	133 aa	Predicted RBP	13.96	□□□□□ -0.17
PHGDH-231	ENST00000641939	DGAT2L6	Q6ZPD8	337 aa		13.96	□□□□□ -0.17
PHGDH-231	ENST00000641939	CYP4Z2P	Q8N1L4	340 aa		13.96	□□□□□ -0.17
PHGDH-231	ENST00000641939	C1orf52	Q8N6N3	182 aa	Known RBP	13.96	□□□□□ -0.17
PHGDH-231	ENST00000641939	GBP7	Q8N8V2	638 aa	Predicted RBP	13.96	□□□□□ -0.17
PHGDH-231	ENST00000641939	CCDC63	Q8NA47	563 aa		13.96	□□□□□ -0.17
PHGDH-231	ENST00000641939	AGAP11	Q8TF27	550 aa		13.96	□□□□□ -0.17
PHGDH-231	ENST00000641939	SREK1	Q8WXA9	508 aa	Known RBP	13.96	□□□□□ -0.17
PHGDH-231	ENST00000641939	ASB15	Q8WXK1	588 aa		13.96	□□□□□ -0.17
PHGDH-231	ENST00000641939	UCN3	Q969E3	161 aa		13.96	□□□□□ -0.17
PHGDH-231	ENST00000641939	SENP5	Q96HI0	755 aa	Predicted RBP	13.96	□□□□□ -0.17
PHGDH-231	ENST00000641939	FBXL20	Q96IG2	436 aa		13.96	□□□□□ -0.17
PHGDH-231	ENST00000641939	C12orf65	Q9H3J6	166 aa	Known RBP	13.96	□□□□□ -0.17
PHGDH-231	ENST00000641939	MID1IP1	Q9NPA3	183 aa		13.96	□□□□□ -0.17
PHGDH-231	ENST00000641939	SLC5A6	Q9Y289	635 aa		13.96	□□□□□ -0.17
PHGDH-231	ENST00000641939	HRK	O00198	91 aa		13.95	□□□□□ -0.18
PHGDH-231	ENST00000641939	WWP2	O00308	870 aa		13.95	□□□□□ -0.18
PHGDH-231	ENST00000641939	SLC35E2	P0CK97	266 aa		13.95	□□□□□ -0.18
PHGDH-231	ENST00000641939	CPA3	P15088	417 aa		13.95	□□□□□ -0.18
PHGDH-231	ENST00000641939	PIK3R1	P27986	724 aa		13.95	□□□□□ -0.18
PHGDH-231	ENST00000641939	SRSF11	Q05519	484 aa	Known RBP	13.95	□□□□□ -0.18
PHGDH-231	ENST00000641939	SPRED3	Q2MJR0	410 aa		13.95	□□□□□ -0.18
PHGDH-231	ENST00000641939	ERCC6L	Q2NKX8	1250 aa		13.95	□□□□□ -0.18
PHGDH-231	ENST00000641939	CFAP157	Q5JU67	520 aa		13.95	□□□□□ -0.18
PHGDH-231	ENST00000641939	GFRAL	Q6UXV0	394 aa		13.95	□□□□□ -0.18
PHGDH-231	ENST00000641939	FRMD7	Q6ZUT3	714 aa		13.95	□□□□□ -0.18
PHGDH-231	ENST00000641939	PNPLA5	Q7Z6Z6	429 aa	Predicted RBP	13.95	□□□□□ -0.18
PHGDH-231	ENST00000641939	TRABD2A	Q86V40	505 aa		13.95	□□□□□ -0.18
PHGDH-231	ENST00000641939	GPALPP1	Q8IXQ4	340 aa		13.95	□□□□□ -0.18
PHGDH-231	ENST00000641939	OR4K14	Q8NGD5	310 aa		13.95	□□□□□ -0.18
PHGDH-231	ENST00000641939	SSC4D	Q8WTU2	575 aa		13.95	□□□□□ -0.18
PHGDH-231	ENST00000641939	CHTF18	Q8WVB6	975 aa		13.95	□□□□□ -0.18
PHGDH-231	ENST00000641939	RIT1	Q92963	219 aa		13.95	□□□□□ -0.18
PHGDH-231	ENST00000641939	FRMD6	Q96NE9	622 aa		13.95	□□□□□ -0.18
PHGDH-231	ENST00000641939	KCNA7	Q96RP8	456 aa		13.95	□□□□□ -0.18
PHGDH-231	ENST00000641939	RASL10B	Q96S79	203 aa		13.95	□□□□□ -0.18
PHGDH-231	ENST00000641939	CNPPD1	Q9BV87	410 aa		13.95	□□□□□ -0.18
PHGDH-231	ENST00000641939	ACPT	Q9BZG2	426 aa		13.95	□□□□□ -0.18
PHGDH-231	ENST00000641939	ROPN1B	Q9BZX4	212 aa	Predicted RBP	13.95	□□□□□ -0.18
PHGDH-231	ENST00000641939	ROPN1	Q9HAT0	212 aa	Predicted RBP	13.95	□□□□□ -0.18
PHGDH-231	ENST00000641939	SDAD1	Q9NVU7	687 aa	Known RBP eCLIP	13.95	□□□□□ -0.18
PHGDH-231	ENST00000641939	OXSM	Q9NWU1	459 aa		13.95	□□□□□ -0.18
PHGDH-231	ENST00000641939	MKS1	Q9NXB0	559 aa		13.95	□□□□□ -0.18
PHGDH-231	ENST00000641939	SEC14L3	Q9UDX4	400 aa		13.95	□□□□□ -0.18
PHGDH-231	ENST00000641939	LGALS13	Q9UHV8	139 aa		13.95	□□□□□ -0.18
PHGDH-231	ENST00000641939	ERRFI1	Q9UJM3	462 aa	Predicted RBP	13.95	□□□□□ -0.18
PHGDH-231	ENST00000641939	MID2	Q9UJV3	735 aa		13.95	□□□□□ -0.18
PHGDH-231	ENST00000641939	ERVK-11	Q9UQG0	969 aa		13.95	□□□□□ -0.18
PHGDH-231	ENST00000641939	OSGIN2	Q9Y236	505 aa		13.95	□□□□□ -0.18
PHGDH-231	ENST00000641939	KLF13	Q9Y2Y9	288 aa	Predicted RBP	13.95	□□□□□ -0.18
PHGDH-231	ENST00000641939	TIMM22	Q9Y584	194 aa		13.95	□□□□□ -0.18
PHGDH-231	ENST00000641939	PCDHA9	Q9Y5H5	950 aa		13.95	□□□□□ -0.18
PHGDH-231	ENST00000641939	DNAJC13	O75165	2243 aa		13.95	□□□□□ -0.18
PHGDH-231	ENST00000641939	ZNF407	Q9C0G0	2248 aa		13.94	□□□□□ -0.18
PHGDH-231	ENST00000641939	C1orf226	A1L170	272 aa		13.94	□□□□□ -0.18
PHGDH-231	ENST00000641939		A8MVJ9	347 aa		13.94	□□□□□ -0.18
PHGDH-231	ENST00000641939		H3BQF6	201 aa		13.94	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms