RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 ADH1BP00325 375 aa13.76□□□□□ -0.21
SCARB2-216ENST00000639300 CD2P06729 351 aa13.76□□□□□ -0.21
SCARB2-216ENST00000639300 IL1RNP18510 177 aa13.76□□□□□ -0.21
SCARB2-216ENST00000639300 ACSL1P33121 698 aa13.76□□□□□ -0.21
SCARB2-216ENST00000639300 DNASE1L1P49184 302 aa13.76□□□□□ -0.21
SCARB2-216ENST00000639300 WDR5P61964 334 aaKnown RBP13.76□□□□□ -0.21
SCARB2-216ENST00000639300 GFOD2Q3B7J2 385 aa13.76□□□□□ -0.21
SCARB2-216ENST00000639300 ZNF517Q6ZMY9 492 aaPredicted RBP13.76□□□□□ -0.21
SCARB2-216ENST00000639300 GAREM2Q75VX8 874 aa13.76□□□□□ -0.21
SCARB2-216ENST00000639300 PARS2Q7L3T8 475 aaKnown RBP13.76□□□□□ -0.21
SCARB2-216ENST00000639300 SNX29P2Q8IUI4 249 aa13.76□□□□□ -0.21
SCARB2-216ENST00000639300 NRSN1Q8IZ57 195 aa13.76□□□□□ -0.21
SCARB2-216ENST00000639300 IQCF1Q8N6M8 205 aa13.76□□□□□ -0.21
SCARB2-216ENST00000639300 WFDC5Q8TCV5 224 aa13.76□□□□□ -0.21
SCARB2-216ENST00000639300 ISL2Q96A47 359 aa13.76□□□□□ -0.21
SCARB2-216ENST00000639300 TRIM36Q9NQ86 728 aa13.76□□□□□ -0.21
SCARB2-216ENST00000639300 GPR37L1O60883 481 aa13.76□□□□□ -0.21
SCARB2-216ENST00000639300 FHP07954 510 aa13.76□□□□□ -0.21
SCARB2-216ENST00000639300 ZNF823P16415 610 aa13.76□□□□□ -0.21
SCARB2-216ENST00000639300 ZNF26P17031 533 aaPredicted RBP13.76□□□□□ -0.21
SCARB2-216ENST00000639300 DPP6P42658 865 aa13.76□□□□□ -0.21
SCARB2-216ENST00000639300 FIGNL1Q6PIW4 674 aa13.76□□□□□ -0.21
SCARB2-216ENST00000639300 KLHL24Q6TFL4 600 aa13.76□□□□□ -0.21
SCARB2-216ENST00000639300 SLC36A4Q6YBV0 504 aa13.76□□□□□ -0.21
SCARB2-216ENST00000639300 ASPGQ86U10 573 aa13.76□□□□□ -0.21
SCARB2-216ENST00000639300 SIX5Q8N196 739 aa13.76□□□□□ -0.21
SCARB2-216ENST00000639300 OSTF1Q92882 214 aa13.76□□□□□ -0.21
SCARB2-216ENST00000639300 NPLQ9BXD5 320 aaPredicted RBP13.76□□□□□ -0.21
SCARB2-216ENST00000639300 NLGN3Q9NZ94 848 aa13.76□□□□□ -0.21
SCARB2-216ENST00000639300 GPR52Q9Y2T5 361 aa13.76□□□□□ -0.21
SCARB2-216ENST00000639300 A0A1W2PPK0 400 aa13.76□□□□□ -0.21
SCARB2-216ENST00000639300 OR6C70A6NIJ9 312 aa13.76□□□□□ -0.21
SCARB2-216ENST00000639300 M0R3H8 397 aa13.76□□□□□ -0.21
SCARB2-216ENST00000639300 NUDT7P0C024 238 aa13.76□□□□□ -0.21
SCARB2-216ENST00000639300 EDNRAP25101 427 aa13.76□□□□□ -0.21
SCARB2-216ENST00000639300 GCGRP47871 477 aa13.76□□□□□ -0.21
SCARB2-216ENST00000639300 BCAP31P51572 246 aa13.76□□□□□ -0.21
SCARB2-216ENST00000639300 SELENOWP63302 87 aa13.76□□□□□ -0.21
SCARB2-216ENST00000639300 NDUFA5Q16718 116 aa13.76□□□□□ -0.21
SCARB2-216ENST00000639300 C22orf42Q6IC83 251 aa13.76□□□□□ -0.21
SCARB2-216ENST00000639300 SBSNQ6UWP8 590 aa13.76□□□□□ -0.21
SCARB2-216ENST00000639300 SPATC1Q76KD6 591 aa13.76□□□□□ -0.21
SCARB2-216ENST00000639300 ARMCX6Q7L4S7 300 aa13.76□□□□□ -0.21
SCARB2-216ENST00000639300 AMIGO1Q86WK6 493 aa13.76□□□□□ -0.21
SCARB2-216ENST00000639300 PROKR2Q8NFJ6 384 aa13.76□□□□□ -0.21
SCARB2-216ENST00000639300 SMPDL3BQ92485 455 aa13.76□□□□□ -0.21
SCARB2-216ENST00000639300 ZNF583Q96ND8 569 aa13.76□□□□□ -0.21
SCARB2-216ENST00000639300 BIRC8Q96P09 236 aa13.76□□□□□ -0.21
SCARB2-216ENST00000639300 COMMD4Q9H0A8 199 aa13.76□□□□□ -0.21
SCARB2-216ENST00000639300 PAK6Q9NQU5 681 aaPredicted RBP13.76□□□□□ -0.21
SCARB2-216ENST00000639300 TTC3P53804 2025 aa13.76□□□□□ -0.21
SCARB2-216ENST00000639300 IGLV3-10A0A075B6K4 115 aa13.76□□□□□ -0.21
SCARB2-216ENST00000639300 OR7A17O14581 309 aa13.76□□□□□ -0.21
SCARB2-216ENST00000639300 FRS3O43559 492 aa13.76□□□□□ -0.21
SCARB2-216ENST00000639300 GADD45AP24522 165 aa13.76□□□□□ -0.21
SCARB2-216ENST00000639300 CXCR1P25024 350 aa13.76□□□□□ -0.21
SCARB2-216ENST00000639300 MAGEA12P43365 314 aa13.76□□□□□ -0.21
SCARB2-216ENST00000639300 GMFBP60983 142 aa13.76□□□□□ -0.21
SCARB2-216ENST00000639300 PUM1Q14671 1186 aaKnown RBP eCLIP13.76□□□□□ -0.21
SCARB2-216ENST00000639300 AAK1Q2M2I8 961 aa13.76□□□□□ -0.21
SCARB2-216ENST00000639300 MLIPQ5VWP3 458 aa13.76□□□□□ -0.21
SCARB2-216ENST00000639300 ATCAYQ86WG3 371 aa13.76□□□□□ -0.21
SCARB2-216ENST00000639300 CHERPQ8IWX8 916 aaKnown RBP13.76□□□□□ -0.21
SCARB2-216ENST00000639300 SPARTQ8N0X7 666 aa13.76□□□□□ -0.21
SCARB2-216ENST00000639300 OR5M3Q8NGP4 307 aa13.76□□□□□ -0.21
SCARB2-216ENST00000639300 PDLIM5Q96HC4 596 aaKnown RBP13.76□□□□□ -0.21
SCARB2-216ENST00000639300 MARF1Q9Y4F3 1742 aaKnown RBP13.75□□□□□ -0.21
SCARB2-216ENST00000639300 ECM29Q5VYK3 1845 aa13.75□□□□□ -0.21
SCARB2-216ENST00000639300 A0A1B0GVT2 93 aa13.75□□□□□ -0.21
SCARB2-216ENST00000639300 CPED1A4D0V7 1026 aa13.75□□□□□ -0.21
SCARB2-216ENST00000639300 PSMD9O00233 223 aa13.75□□□□□ -0.21
SCARB2-216ENST00000639300 EMC8O43402 210 aa13.75□□□□□ -0.21
SCARB2-216ENST00000639300 ECDO95905 644 aaPredicted RBP13.75□□□□□ -0.21
SCARB2-216ENST00000639300 SLC5A2P31639 672 aa13.75□□□□□ -0.21
SCARB2-216ENST00000639300 GRIA2P42262 883 aa13.75□□□□□ -0.21
SCARB2-216ENST00000639300 CBLBQ13191 982 aa13.75□□□□□ -0.21
SCARB2-216ENST00000639300 SMN1Q16637 294 aaKnown RBP13.75□□□□□ -0.21
SCARB2-216ENST00000639300 CDKL4Q5MAI5 379 aa13.75□□□□□ -0.21
SCARB2-216ENST00000639300 GTF2IRD2BQ6EKJ0 949 aa13.75□□□□□ -0.21
SCARB2-216ENST00000639300 SHFQ7M4L6 423 aa13.75□□□□□ -0.21
SCARB2-216ENST00000639300 GTF2IRD2Q86UP8 949 aa13.75□□□□□ -0.21
SCARB2-216ENST00000639300 OR52P1PQ8NH57 321 aa13.75□□□□□ -0.21
SCARB2-216ENST00000639300 BBS10Q8TAM1 723 aa13.75□□□□□ -0.21
SCARB2-216ENST00000639300 TM9SF2Q99805 663 aa13.75□□□□□ -0.21
SCARB2-216ENST00000639300 BEX2Q9BXY8 128 aa13.75□□□□□ -0.21
SCARB2-216ENST00000639300 NAA50Q9GZZ1 169 aaKnown RBP13.75□□□□□ -0.21
SCARB2-216ENST00000639300 BEX1Q9HBH7 125 aa13.75□□□□□ -0.21
SCARB2-216ENST00000639300 CCL26Q9Y258 94 aa13.75□□□□□ -0.21
SCARB2-216ENST00000639300 S100A1P23297 94 aa13.75□□□□□ -0.21
SCARB2-216ENST00000639300 GPR4P46093 362 aa13.75□□□□□ -0.21
SCARB2-216ENST00000639300 DSG2Q14126 1118 aa13.75□□□□□ -0.21
SCARB2-216ENST00000639300 ZNF234Q14588 700 aa13.75□□□□□ -0.21
SCARB2-216ENST00000639300 MEX3DQ86XN8 651 aaKnown RBP13.75□□□□□ -0.21
SCARB2-216ENST00000639300 CPXM2Q8N436 756 aa13.75□□□□□ -0.21
SCARB2-216ENST00000639300 RASGEF1AQ8N9B8 481 aa13.75□□□□□ -0.21
SCARB2-216ENST00000639300 RNASE11Q8TAA1 199 aaKnown RBP13.75□□□□□ -0.21
SCARB2-216ENST00000639300 TRMT2BQ96GJ1 504 aaKnown RBP13.75□□□□□ -0.21
SCARB2-216ENST00000639300 ADAD1Q96M93 576 aaKnown RBP13.75□□□□□ -0.21
SCARB2-216ENST00000639300 WDR92Q96MX6 357 aa13.75□□□□□ -0.21
SCARB2-216ENST00000639300 SLC17A9Q9BYT1 436 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms