RNA–Protein interactions for RNA: ENST00000638959.1

LMBR1-222, Transcript of limb development membrane protein 1, humanhuman

TSL 5 BASIC

Gene LMBR1, Length 93 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-222ENST00000638959 NAGLUP54802 743 aa-0.4□□□□□ -2.47
LMBR1-222ENST00000638959 CLDN15P56746 228 aa-0.4□□□□□ -2.47
LMBR1-222ENST00000638959 PRAMEP78395 509 aa-0.4□□□□□ -2.47
LMBR1-222ENST00000638959 CNTN1Q12860 1018 aa-0.4□□□□□ -2.47
LMBR1-222ENST00000638959 RBMY1FQ15415 496 aaKnown RBP-0.4□□□□□ -2.47
LMBR1-222ENST00000638959 MAPK11Q15759 364 aa-0.4□□□□□ -2.47
LMBR1-222ENST00000638959 TAF12Q16514 161 aa-0.4□□□□□ -2.47
LMBR1-222ENST00000638959 CDKN3Q16667 212 aa-0.4□□□□□ -2.47
LMBR1-222ENST00000638959 TTC27Q6P3X3 843 aa-0.4□□□□□ -2.47
LMBR1-222ENST00000638959 C15orf52Q6ZUT6 534 aaKnown RBP-0.4□□□□□ -2.47
LMBR1-222ENST00000638959 SLFN11Q7Z7L1 901 aa-0.4□□□□□ -2.47
LMBR1-222ENST00000638959 CCDC146Q8IYE0 955 aa-0.4□□□□□ -2.47
LMBR1-222ENST00000638959 ALLCQ8N6M5 410 aa-0.4□□□□□ -2.47
LMBR1-222ENST00000638959 CCDC63Q8NA47 563 aa-0.4□□□□□ -2.47
LMBR1-222ENST00000638959 DUSP18Q8NEJ0 188 aa-0.4□□□□□ -2.47
LMBR1-222ENST00000638959 CFAP61Q8NHU2 1237 aa-0.4□□□□□ -2.47
LMBR1-222ENST00000638959 RAET1EQ8TD07 263 aa-0.4□□□□□ -2.47
LMBR1-222ENST00000638959 LRRC59Q96AG4 307 aaKnown RBP-0.4□□□□□ -2.47
LMBR1-222ENST00000638959 TVP23CQ96ET8 276 aa-0.4□□□□□ -2.47
LMBR1-222ENST00000638959 RNF185Q96GF1 192 aa-0.4□□□□□ -2.47
LMBR1-222ENST00000638959 SMIM14Q96QK8 99 aa-0.4□□□□□ -2.47
LMBR1-222ENST00000638959 UBA5Q9GZZ9 404 aa-0.4□□□□□ -2.47
LMBR1-222ENST00000638959 DPEP3Q9H4B8 488 aa-0.4□□□□□ -2.47
LMBR1-222ENST00000638959 CDH20Q9HBT6 801 aa-0.4□□□□□ -2.47
LMBR1-222ENST00000638959 TBC1D22BQ9NU19 505 aa-0.4□□□□□ -2.47
LMBR1-222ENST00000638959 RNF150Q9ULK6 438 aa-0.4□□□□□ -2.47
LMBR1-222ENST00000638959 ZNF337Q9Y3M9 751 aa-0.4□□□□□ -2.47
LMBR1-222ENST00000638959 RPS6KL1Q9Y6S9 549 aa-0.4□□□□□ -2.47
LMBR1-222ENST00000638959 CACNA1DQ01668 2161 aa-0.4□□□□□ -2.47
LMBR1-222ENST00000638959 SVILO95425 2214 aa-0.41□□□□□ -2.47
LMBR1-222ENST00000638959 A0A0A6YYC8 382 aaPredicted RBP-0.41□□□□□ -2.48
LMBR1-222ENST00000638959 IGHV3-64DA0A0J9YX35 117 aa-0.41□□□□□ -2.48
LMBR1-222ENST00000638959 A0A1W2PPQ1 181 aa-0.41□□□□□ -2.48
LMBR1-222ENST00000638959 TSPY2A6NKD2 308 aa-0.41□□□□□ -2.48
LMBR1-222ENST00000638959 C11orf94C9JXX5 98 aa-0.41□□□□□ -2.48
LMBR1-222ENST00000638959 I3L1I5 382 aaPredicted RBP-0.41□□□□□ -2.48
LMBR1-222ENST00000638959 B4GALT5O43286 388 aa-0.41□□□□□ -2.48
LMBR1-222ENST00000638959 B4GAT1O43505 415 aa-0.41□□□□□ -2.48
LMBR1-222ENST00000638959 CTDNEP1O95476 244 aa-0.41□□□□□ -2.48
LMBR1-222ENST00000638959 FGF19O95750 216 aa-0.41□□□□□ -2.48
LMBR1-222ENST00000638959 GSRP00390 522 aa-0.41□□□□□ -2.48
LMBR1-222ENST00000638959 IGKV1-16P04430 117 aa-0.41□□□□□ -2.48
LMBR1-222ENST00000638959 PLEKP08567 350 aaPredicted RBP-0.41□□□□□ -2.48
LMBR1-222ENST00000638959 RAB40ALP0C0E4 278 aa-0.41□□□□□ -2.48
LMBR1-222ENST00000638959 TSPY3P0CV98 308 aa-0.41□□□□□ -2.48
LMBR1-222ENST00000638959 TSPY4P0CV99 314 aa-0.41□□□□□ -2.48
LMBR1-222ENST00000638959 TSPY8P0CW00 308 aa-0.41□□□□□ -2.48
LMBR1-222ENST00000638959 TSPY10P0CW01 314 aa-0.41□□□□□ -2.48
LMBR1-222ENST00000638959 EPCAMP16422 314 aa-0.41□□□□□ -2.48
LMBR1-222ENST00000638959 UQCRC2P22695 453 aa-0.41□□□□□ -2.48
LMBR1-222ENST00000638959 EEF1DP29692 281 aaKnown RBP-0.41□□□□□ -2.48
LMBR1-222ENST00000638959 PPARGP37231 505 aaPredicted RBP-0.41□□□□□ -2.48
LMBR1-222ENST00000638959 LHX1P48742 406 aa-0.41□□□□□ -2.48
LMBR1-222ENST00000638959 UCP2P55851 309 aa-0.41□□□□□ -2.48
LMBR1-222ENST00000638959 HSPB3Q12988 150 aa-0.41□□□□□ -2.48
LMBR1-222ENST00000638959 BAMBIQ13145 260 aa-0.41□□□□□ -2.48
LMBR1-222ENST00000638959 DPYSL3Q14195 570 aa-0.41□□□□□ -2.48
LMBR1-222ENST00000638959 ELAVL3Q14576 367 aaKnown RBP-0.41□□□□□ -2.48
LMBR1-222ENST00000638959 RBBP7Q16576 425 aa-0.41□□□□□ -2.48
LMBR1-222ENST00000638959 ZNF57Q68EA5 555 aaPredicted RBP-0.41□□□□□ -2.48
LMBR1-222ENST00000638959 TMEM154Q6P9G4 183 aa-0.41□□□□□ -2.48
LMBR1-222ENST00000638959 ZNF595Q8IYB9 648 aa-0.41□□□□□ -2.48
LMBR1-222ENST00000638959 PRSS35Q8N3Z0 413 aa-0.41□□□□□ -2.48
LMBR1-222ENST00000638959 PDILTQ8N807 584 aa-0.41□□□□□ -2.48
LMBR1-222ENST00000638959 GMCL1P1Q8NEA9 526 aa-0.41□□□□□ -2.48
LMBR1-222ENST00000638959 PGM2Q96G03 612 aa-0.41□□□□□ -2.48
LMBR1-222ENST00000638959 CEP170P1Q96L14 293 aa-0.41□□□□□ -2.48
LMBR1-222ENST00000638959 CDRT15Q96T59 188 aa-0.41□□□□□ -2.48
LMBR1-222ENST00000638959 SPAG8Q99932 426 aaPredicted RBP-0.41□□□□□ -2.48
LMBR1-222ENST00000638959 FAM173AQ9BQD7 235 aa-0.41□□□□□ -2.48
LMBR1-222ENST00000638959 PDCL3Q9H2J4 239 aa-0.41□□□□□ -2.48
LMBR1-222ENST00000638959 RNF41Q9H4P4 317 aaPredicted RBP-0.41□□□□□ -2.48
LMBR1-222ENST00000638959 PHPT1Q9NRX4 125 aaPredicted RBP-0.41□□□□□ -2.48
LMBR1-222ENST00000638959 PIGVQ9NUD9 493 aa-0.41□□□□□ -2.48
LMBR1-222ENST00000638959 MRGBPQ9NV56 204 aa-0.41□□□□□ -2.48
LMBR1-222ENST00000638959 SOHLH2Q9NX45 425 aa-0.41□□□□□ -2.48
LMBR1-222ENST00000638959 MARCH5Q9NX47 278 aa-0.41□□□□□ -2.48
LMBR1-222ENST00000638959 TAS2R16Q9NYV7 291 aa-0.41□□□□□ -2.48
LMBR1-222ENST00000638959 TXNDC16Q9P2K2 825 aa-0.41□□□□□ -2.48
LMBR1-222ENST00000638959 WDR35Q9P2L0 1181 aa-0.41□□□□□ -2.48
LMBR1-222ENST00000638959 LCMT1Q9UIC8 334 aa-0.41□□□□□ -2.48
LMBR1-222ENST00000638959 CPSF3Q9UKF6 684 aaKnown RBP-0.41□□□□□ -2.48
LMBR1-222ENST00000638959 RAB23Q9ULC3 237 aa-0.41□□□□□ -2.48
LMBR1-222ENST00000638959 FZR1Q9UM11 496 aa-0.41□□□□□ -2.48
LMBR1-222ENST00000638959 PRPF19Q9UMS4 504 aaKnown RBP-0.41□□□□□ -2.48
LMBR1-222ENST00000638959 SLCO1B1Q9Y6L6 691 aa-0.41□□□□□ -2.48
LMBR1-222ENST00000638959 A0A1W2PPH5 198 aa-0.42□□□□□ -2.48
LMBR1-222ENST00000638959 E5RGE8 158 aa-0.42□□□□□ -2.48
LMBR1-222ENST00000638959 KLF8O95600 359 aaPredicted RBP-0.42□□□□□ -2.48
LMBR1-222ENST00000638959 POLBP06746 335 aa-0.42□□□□□ -2.48
LMBR1-222ENST00000638959 FHP07954 510 aa-0.42□□□□□ -2.48
LMBR1-222ENST00000638959 CLTBP09497 229 aa-0.42□□□□□ -2.48
LMBR1-222ENST00000638959 NUDT17P0C025 328 aa-0.42□□□□□ -2.48
LMBR1-222ENST00000638959 CT45A10P0DMU9 189 aa-0.42□□□□□ -2.48
LMBR1-222ENST00000638959 CGB3P0DN86 165 aa-0.42□□□□□ -2.48
LMBR1-222ENST00000638959 SAGP10523 405 aaPredicted RBP-0.42□□□□□ -2.48
LMBR1-222ENST00000638959 PVRP15151 417 aa-0.42□□□□□ -2.48
LMBR1-222ENST00000638959 ACP1P24666 158 aa-0.42□□□□□ -2.48
LMBR1-222ENST00000638959 IER3P46695 156 aa-0.42□□□□□ -2.48
LMBR1-222ENST00000638959 POU3F4P49335 361 aa-0.42□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms