RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 HERVK_113P63132 956 aa16.42■□□□□ 0.22
PNKP-230ENST00000638016 ERVK-8P63133 956 aa16.42■□□□□ 0.22
PNKP-230ENST00000638016 ADORA2A-AS1P86434 159 aa16.42■□□□□ 0.22
PNKP-230ENST00000638016 UNC50Q53HI1 259 aa16.42■□□□□ 0.22
PNKP-230ENST00000638016 PSD4Q8NDX1 1056 aa16.42■□□□□ 0.22
PNKP-230ENST00000638016 MAGED4Q96JG8 741 aa16.42■□□□□ 0.22
PNKP-230ENST00000638016 ERVK-6Q9BXR3 956 aa16.42■□□□□ 0.22
PNKP-230ENST00000638016 LYARQ9NX58 379 aaKnown RBP16.42■□□□□ 0.22
PNKP-230ENST00000638016 MS4A12Q9NXJ0 267 aa16.42■□□□□ 0.22
PNKP-230ENST00000638016 TMCO1Q9UM00 188 aa16.42■□□□□ 0.22
PNKP-230ENST00000638016 ERVK-19Q9WJR5 959 aa16.42■□□□□ 0.22
PNKP-230ENST00000638016 ZNF835Q9Y2P0 537 aa16.42■□□□□ 0.22
PNKP-230ENST00000638016 CRYBG3Q68DQ2 2970 aa16.42■□□□□ 0.22
PNKP-230ENST00000638016 CENPEQ02224 2701 aa16.42■□□□□ 0.22
PNKP-230ENST00000638016 A0A1W2PPM1 405 aa16.41■□□□□ 0.22
PNKP-230ENST00000638016 TFECO14948 347 aaPredicted RBP16.41■□□□□ 0.22
PNKP-230ENST00000638016 CLPSP04118 112 aa16.41■□□□□ 0.22
PNKP-230ENST00000638016 COX7A2P14406 83 aa16.41■□□□□ 0.22
PNKP-230ENST00000638016 CHN1P15882 459 aa16.41■□□□□ 0.22
PNKP-230ENST00000638016 BUD31P41223 144 aaPredicted RBP16.41■□□□□ 0.22
PNKP-230ENST00000638016 PLIN5Q00G26 463 aa16.41■□□□□ 0.22
PNKP-230ENST00000638016 RBPJQ06330 500 aa16.41■□□□□ 0.22
PNKP-230ENST00000638016 ASPHQ12797 758 aa16.41■□□□□ 0.22
PNKP-230ENST00000638016 ZNF267Q14586 743 aaPredicted RBP16.41■□□□□ 0.22
PNKP-230ENST00000638016 CDSNQ15517 529 aa16.41■□□□□ 0.22
PNKP-230ENST00000638016 GGTA1PQ4G0N0 100 aa16.41■□□□□ 0.22
PNKP-230ENST00000638016 SPPL2CQ8IUH8 684 aa16.41■□□□□ 0.22
PNKP-230ENST00000638016 OR52N2Q8NGI0 321 aa16.41■□□□□ 0.22
PNKP-230ENST00000638016 TANKQ92844 425 aa16.41■□□□□ 0.22
PNKP-230ENST00000638016 SERPINI1Q99574 410 aa16.41■□□□□ 0.22
PNKP-230ENST00000638016 C1QTNF3Q9BXJ4 246 aa16.41■□□□□ 0.22
PNKP-230ENST00000638016 SLC12A4Q9UP95 1085 aa16.41■□□□□ 0.22
PNKP-230ENST00000638016 CACNA1CQ13936 2221 aa16.4■□□□□ 0.22
PNKP-230ENST00000638016 FAM166BA8MTA8 275 aa16.4■□□□□ 0.22
PNKP-230ENST00000638016 CDC40O60508 579 aaKnown RBP eCLIP16.4■□□□□ 0.22
PNKP-230ENST00000638016 PDE9AO76083 593 aa16.4■□□□□ 0.22
PNKP-230ENST00000638016 SEMA3DO95025 777 aa16.4■□□□□ 0.22
PNKP-230ENST00000638016 NADKO95544 446 aaPredicted RBP16.4■□□□□ 0.22
PNKP-230ENST00000638016 GPR75O95800 540 aa16.4■□□□□ 0.22
PNKP-230ENST00000638016 CT62P0C5K7 136 aa16.4■□□□□ 0.22
PNKP-230ENST00000638016 CCL3P10147 92 aa16.4■□□□□ 0.22
PNKP-230ENST00000638016 PYGBP11216 843 aa16.4■□□□□ 0.22
PNKP-230ENST00000638016 TLX1P31314 330 aaPredicted RBP16.4■□□□□ 0.22
PNKP-230ENST00000638016 HSD17B3P37058 310 aa16.4■□□□□ 0.22
PNKP-230ENST00000638016 HTR6P50406 440 aa16.4■□□□□ 0.22
PNKP-230ENST00000638016 ARFIP1P53367 373 aa16.4■□□□□ 0.22
PNKP-230ENST00000638016 CLCQ05315 142 aa16.4■□□□□ 0.22
PNKP-230ENST00000638016 GALNT1Q10472 559 aaPredicted RBP16.4■□□□□ 0.22
PNKP-230ENST00000638016 IFT88Q13099 833 aa16.4■□□□□ 0.22
PNKP-230ENST00000638016 KRTCAP3Q53RY4 240 aa16.4■□□□□ 0.22
PNKP-230ENST00000638016 CMPK2Q5EBM0 449 aa16.4■□□□□ 0.22
PNKP-230ENST00000638016 ZNF678Q5SXM1 525 aa16.4■□□□□ 0.22
PNKP-230ENST00000638016 Q6ZPB1 254 aaPredicted RBP16.4■□□□□ 0.22
PNKP-230ENST00000638016 ST13P4Q8IZP2 240 aaPredicted RBP16.4■□□□□ 0.22
PNKP-230ENST00000638016 GHDCQ8N2G8 530 aa16.4■□□□□ 0.22
PNKP-230ENST00000638016 CDYL2Q8N8U2 506 aa16.4■□□□□ 0.22
PNKP-230ENST00000638016 ZFP62Q8NB50 900 aaPredicted RBP16.4■□□□□ 0.22
PNKP-230ENST00000638016 OR2M7Q8NG81 312 aa16.4■□□□□ 0.22
PNKP-230ENST00000638016 SELENOMQ8WWX9 145 aa16.4■□□□□ 0.22
PNKP-230ENST00000638016 MTBPQ96DY7 904 aa16.4■□□□□ 0.22
PNKP-230ENST00000638016 GAL3ST4Q96RP7 486 aa16.4■□□□□ 0.22
PNKP-230ENST00000638016 ELOVL6Q9H5J4 265 aa16.4■□□□□ 0.22
PNKP-230ENST00000638016 TIMMDC1Q9NPL8 285 aa16.4■□□□□ 0.22
PNKP-230ENST00000638016 PSD3Q9NYI0 1048 aa16.4■□□□□ 0.22
PNKP-230ENST00000638016 PSMC3IPQ9P2W1 217 aaPredicted RBP16.4■□□□□ 0.22
PNKP-230ENST00000638016 COPS7AQ9UBW8 275 aa16.4■□□□□ 0.22
PNKP-230ENST00000638016 EMCNQ9ULC0 261 aa16.4■□□□□ 0.22
PNKP-230ENST00000638016 PPT2Q9UMR5 302 aa16.4■□□□□ 0.22
PNKP-230ENST00000638016 NCKAP5O14513 1909 aa16.39■□□□□ 0.21
PNKP-230ENST00000638016 ITPR2Q14571 2701 aa16.39■□□□□ 0.21
PNKP-230ENST00000638016 A0A1B0GTH9 108 aa16.39■□□□□ 0.21
PNKP-230ENST00000638016 SYNDIG1LA6NDD5 238 aa16.39■□□□□ 0.21
PNKP-230ENST00000638016 SMIM23A6NLE4 172 aa16.39■□□□□ 0.21
PNKP-230ENST00000638016 PRSS44E7EML9 344 aa16.39■□□□□ 0.21
PNKP-230ENST00000638016 KLRC4-KLRK1H3BQV0 150 aa16.39■□□□□ 0.21
PNKP-230ENST00000638016 CDK2AP1O14519 115 aa16.39■□□□□ 0.21
PNKP-230ENST00000638016 OR10H2O60403 315 aa16.39■□□□□ 0.21
PNKP-230ENST00000638016 SUPT7LO94864 414 aa16.39■□□□□ 0.21
PNKP-230ENST00000638016 OTCP00480 354 aa16.39■□□□□ 0.21
PNKP-230ENST00000638016 ABOP16442 354 aa16.39■□□□□ 0.21
PNKP-230ENST00000638016 SSTR4P31391 388 aa16.39■□□□□ 0.21
PNKP-230ENST00000638016 SLCO1A2P46721 670 aa16.39■□□□□ 0.21
PNKP-230ENST00000638016 DNASE1L1P49184 302 aa16.39■□□□□ 0.21
PNKP-230ENST00000638016 LGSNQ5TDP6 509 aa16.39■□□□□ 0.21
PNKP-230ENST00000638016 FAM180BQ6P0A1 224 aa16.39■□□□□ 0.21
PNKP-230ENST00000638016 LYPD8Q6UX82 237 aa16.39■□□□□ 0.21
PNKP-230ENST00000638016 COMMD6Q7Z4G1 85 aa16.39■□□□□ 0.21
PNKP-230ENST00000638016 MRGPRGQ86SM5 289 aa16.39■□□□□ 0.21
PNKP-230ENST00000638016 METTL4Q8N3J2 472 aa16.39■□□□□ 0.21
PNKP-230ENST00000638016 OR8K3Q8NH51 312 aa16.39■□□□□ 0.21
PNKP-230ENST00000638016 C16orf52Q8NHV5 167 aa16.39■□□□□ 0.21
PNKP-230ENST00000638016 RBM18Q96H35 190 aaKnown RBP16.39■□□□□ 0.21
PNKP-230ENST00000638016 FBXL20Q96IG2 436 aa16.39■□□□□ 0.21
PNKP-230ENST00000638016 PHF12Q96QT6 1004 aa16.39■□□□□ 0.21
PNKP-230ENST00000638016 DEFB127Q9H1M4 99 aa16.39■□□□□ 0.21
PNKP-230ENST00000638016 C12orf65Q9H3J6 166 aaKnown RBP16.39■□□□□ 0.21
PNKP-230ENST00000638016 SUCOQ9UBS9 1254 aaKnown RBP16.39■□□□□ 0.21
PNKP-230ENST00000638016 HRH3Q9Y5N1 445 aa16.39■□□□□ 0.21
PNKP-230ENST00000638016 NINQ8N4C6 2090 aa16.39■□□□□ 0.21
PNKP-230ENST00000638016 CELSR2Q9HCU4 2923 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms