RNA–Protein interactions for RNA: ENST00000638009.1

CACNA1A-257, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,665 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-257ENST00000638009 MSMO1Q15800 293 aa18.62■□□□□ 0.57
CACNA1A-257ENST00000638009 PLPPR4Q7Z2D5 763 aa18.62■□□□□ 0.57
CACNA1A-257ENST00000638009 MAB21L3Q8N8X9 362 aa18.62■□□□□ 0.57
CACNA1A-257ENST00000638009 ACOT11Q8WXI4 607 aaPredicted RBP18.62■□□□□ 0.57
CACNA1A-257ENST00000638009 ZNFX1Q9P2E3 1918 aaKnown RBP18.62■□□□□ 0.57
CACNA1A-257ENST00000638009 CSF1P09603 554 aa18.62■□□□□ 0.57
CACNA1A-257ENST00000638009 PPA1Q15181 289 aa18.62■□□□□ 0.57
CACNA1A-257ENST00000638009 MS4A15Q8N5U1 240 aa18.62■□□□□ 0.57
CACNA1A-257ENST00000638009 OR10R2Q8NGX6 335 aa18.62■□□□□ 0.57
CACNA1A-257ENST00000638009 CGREF1Q99674 301 aa18.62■□□□□ 0.57
CACNA1A-257ENST00000638009 INPPL1O15357 1258 aa18.62■□□□□ 0.57
CACNA1A-257ENST00000638009 CDK6Q00534 326 aa18.62■□□□□ 0.57
CACNA1A-257ENST00000638009 PHOSPHO1Q8TCT1 267 aa18.62■□□□□ 0.57
CACNA1A-257ENST00000638009 DCUN1D4Q92564 292 aa18.62■□□□□ 0.57
CACNA1A-257ENST00000638009 OR52A5Q9H2C5 316 aa18.62■□□□□ 0.57
CACNA1A-257ENST00000638009 RFPL3O75679 317 aa18.62■□□□□ 0.57
CACNA1A-257ENST00000638009 CHRM5P08912 532 aaPredicted RBP18.62■□□□□ 0.57
CACNA1A-257ENST00000638009 CAV2P51636 162 aa18.62■□□□□ 0.57
CACNA1A-257ENST00000638009 TMEM220Q6QAJ8 160 aa18.62■□□□□ 0.57
CACNA1A-257ENST00000638009 LOC102723532A0A0G2JNH3 316 aa18.62■□□□□ 0.57
CACNA1A-257ENST00000638009 KRBOX1C9JBD0 128 aa18.62■□□□□ 0.57
CACNA1A-257ENST00000638009 FSCN2O14926 492 aa18.62■□□□□ 0.57
CACNA1A-257ENST00000638009 MSX1P28360 303 aa18.62■□□□□ 0.57
CACNA1A-257ENST00000638009 RHBDL3P58872 404 aa18.62■□□□□ 0.57
CACNA1A-257ENST00000638009 ZUFSPQ96AP4 578 aa18.62■□□□□ 0.57
CACNA1A-257ENST00000638009 SNX18Q96RF0 628 aa18.62■□□□□ 0.57
CACNA1A-257ENST00000638009 MINDY3Q9H8M7 445 aa18.62■□□□□ 0.57
CACNA1A-257ENST00000638009 SMAD9O15198 467 aaKnown RBP18.61■□□□□ 0.57
CACNA1A-257ENST00000638009 PRAMEF2O60811 474 aa18.61■□□□□ 0.57
CACNA1A-257ENST00000638009 FAM124AQ86V42 546 aa18.61■□□□□ 0.57
CACNA1A-257ENST00000638009 FAM109AQ8N4B1 249 aa18.61■□□□□ 0.57
CACNA1A-257ENST00000638009 GAS2L1Q99501 681 aaPredicted RBP18.61■□□□□ 0.57
CACNA1A-257ENST00000638009 DUS2Q9NX74 493 aaKnown RBP18.61■□□□□ 0.57
CACNA1A-257ENST00000638009 SGCEO43556 437 aa18.61■□□□□ 0.57
CACNA1A-257ENST00000638009 ONECUT3O60422 494 aaPredicted RBP18.61■□□□□ 0.57
CACNA1A-257ENST00000638009 KMT2EQ8IZD2 1858 aa18.61■□□□□ 0.57
CACNA1A-257ENST00000638009 E9PI62 339 aa18.61■□□□□ 0.57
CACNA1A-257ENST00000638009 CHEK1O14757 476 aa18.61■□□□□ 0.57
CACNA1A-257ENST00000638009 GOT2P00505 430 aaKnown RBP18.61■□□□□ 0.57
CACNA1A-257ENST00000638009 OR5T1Q8NG75 326 aa18.61■□□□□ 0.57
CACNA1A-257ENST00000638009 MYOCQ99972 504 aa18.61■□□□□ 0.57
CACNA1A-257ENST00000638009 PELOQ9BRX2 385 aaKnown RBP18.61■□□□□ 0.57
CACNA1A-257ENST00000638009 YLPM1P49750 1951 aaKnown RBP18.61■□□□□ 0.57
CACNA1A-257ENST00000638009 A0A1W2PPV4 95 aa18.61■□□□□ 0.57
CACNA1A-257ENST00000638009 NFKBIEO00221 500 aa18.61■□□□□ 0.57
CACNA1A-257ENST00000638009 PENKP01210 267 aaPredicted RBP18.61■□□□□ 0.57
CACNA1A-257ENST00000638009 CSNK2A1P68400 391 aaPredicted RBP18.61■□□□□ 0.57
CACNA1A-257ENST00000638009 TAF9Q16594 264 aa18.61■□□□□ 0.57
CACNA1A-257ENST00000638009 ANKRD13BQ86YJ7 626 aa18.61■□□□□ 0.57
CACNA1A-257ENST00000638009 NAXEQ8NCW5 288 aa18.61■□□□□ 0.57
CACNA1A-257ENST00000638009 CSNK2A3Q8NEV1 391 aa18.61■□□□□ 0.57
CACNA1A-257ENST00000638009 FNDC9Q8TBE3 224 aa18.61■□□□□ 0.57
CACNA1A-257ENST00000638009 ELMOD3Q96FG2 381 aa18.61■□□□□ 0.57
CACNA1A-257ENST00000638009 TSSK6Q9BXA6 273 aa18.61■□□□□ 0.57
CACNA1A-257ENST00000638009 IMPDH1P20839 514 aa18.61■□□□□ 0.57
CACNA1A-257ENST00000638009 PRKACBP22694 351 aa18.61■□□□□ 0.57
CACNA1A-257ENST00000638009 SF3B4Q15427 424 aaKnown RBP eCLIP18.61■□□□□ 0.57
CACNA1A-257ENST00000638009 PUM2Q8TB72 1066 aaKnown RBP eCLIP18.61■□□□□ 0.57
CACNA1A-257ENST00000638009 TRUB1Q8WWH5 349 aaKnown RBP18.61■□□□□ 0.57
CACNA1A-257ENST00000638009 BMFQ96LC9 184 aa18.61■□□□□ 0.57
CACNA1A-257ENST00000638009 PATZ1Q9HBE1 687 aaKnown RBP18.61■□□□□ 0.57
CACNA1A-257ENST00000638009 REV1Q9UBZ9 1251 aa18.61■□□□□ 0.57
CACNA1A-257ENST00000638009 A0A1W2PPW3 197 aa18.61■□□□□ 0.57
CACNA1A-257ENST00000638009 SOX1O00570 391 aaPredicted RBP18.61■□□□□ 0.57
CACNA1A-257ENST00000638009 CSF2P04141 144 aa18.61■□□□□ 0.57
CACNA1A-257ENST00000638009 RFC3P40938 356 aa18.61■□□□□ 0.57
CACNA1A-257ENST00000638009 PDLIM3Q53GG5 364 aaPredicted RBP18.61■□□□□ 0.57
CACNA1A-257ENST00000638009 WDR77Q9BQA1 342 aaPredicted RBP18.61■□□□□ 0.57
CACNA1A-257ENST00000638009 POLDIP3Q9BY77 421 aaKnown RBP18.61■□□□□ 0.57
CACNA1A-257ENST00000638009 SERPINE2P07093 398 aa18.61■□□□□ 0.57
CACNA1A-257ENST00000638009 LIPKQ5VXJ0 399 aa18.61■□□□□ 0.57
CACNA1A-257ENST00000638009 UHRF2Q96PU4 802 aa18.61■□□□□ 0.57
CACNA1A-257ENST00000638009 MAF1Q9H063 256 aa18.61■□□□□ 0.57
CACNA1A-257ENST00000638009 F5H5P2 479 aa18.6■□□□□ 0.57
CACNA1A-257ENST00000638009 BCAS2O75934 225 aaPredicted RBP18.6■□□□□ 0.57
CACNA1A-257ENST00000638009 ZDHHC11BP0C7U3 371 aa18.6■□□□□ 0.57
CACNA1A-257ENST00000638009 SLC2A1P11166 492 aa18.6■□□□□ 0.57
CACNA1A-257ENST00000638009 SHMT1P34896 483 aa18.6■□□□□ 0.57
CACNA1A-257ENST00000638009 FLYWCH1Q4VC44 716 aa18.6■□□□□ 0.57
CACNA1A-257ENST00000638009 CD163Q86VB7 1156 aa18.6■□□□□ 0.57
CACNA1A-257ENST00000638009 IQCKQ8N0W5 287 aa18.6■□□□□ 0.57
CACNA1A-257ENST00000638009 NUBP2Q9Y5Y2 271 aa18.6■□□□□ 0.57
CACNA1A-257ENST00000638009 A0A1B0GVT2 93 aa18.6■□□□□ 0.57
CACNA1A-257ENST00000638009 KCNC3Q14003 757 aa18.6■□□□□ 0.57
CACNA1A-257ENST00000638009 CEACAM19Q7Z692 300 aa18.6■□□□□ 0.57
CACNA1A-257ENST00000638009 PAPOLGQ9BWT3 736 aaKnown RBP18.6■□□□□ 0.57
CACNA1A-257ENST00000638009 UFSP2Q9NUQ7 469 aa18.6■□□□□ 0.57
CACNA1A-257ENST00000638009 SYN3O14994 580 aa18.6■□□□□ 0.57
CACNA1A-257ENST00000638009 TARBP2Q15633 366 aaKnown RBP18.6■□□□□ 0.57
CACNA1A-257ENST00000638009 RNF151Q2KHN1 245 aa18.6■□□□□ 0.57
CACNA1A-257ENST00000638009 CELF3Q5SZQ8 465 aaKnown RBP18.6■□□□□ 0.57
CACNA1A-257ENST00000638009 RBMS3Q6XE24 437 aaKnown RBP18.6■□□□□ 0.57
CACNA1A-257ENST00000638009 CFAP52Q8N1V2 620 aa18.6■□□□□ 0.57
CACNA1A-257ENST00000638009 DEDD2Q8WXF8 326 aa18.6■□□□□ 0.57
CACNA1A-257ENST00000638009 NUS1Q96E22 293 aa18.6■□□□□ 0.57
CACNA1A-257ENST00000638009 IQCF5A8MTL0 148 aa18.6■□□□□ 0.57
CACNA1A-257ENST00000638009 CREG1O75629 220 aa18.6■□□□□ 0.57
CACNA1A-257ENST00000638009 HTR3BO95264 441 aa18.6■□□□□ 0.57
CACNA1A-257ENST00000638009 GABRR2P28476 465 aa18.6■□□□□ 0.57
CACNA1A-257ENST00000638009 KIAA0930Q6ICG6 404 aaPredicted RBP18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms